| Definition | Mycoplasma hyopneumoniae J chromosome, complete genome. |
|---|---|
| Accession | NC_007295 |
| Length | 897,405 |
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The map label for this gene is 71893990
Identifier: 71893990
GI number: 71893990
Start: 841757
End: 842419
Strand: Reverse
Name: 71893990
Synonym: MHJ_0642
Alternate gene names: NA
Gene position: 842419-841757 (Counterclockwise)
Preceding gene: 71893991
Following gene: 71893989
Centisome position: 93.87
GC content: 25.04
Gene sequence:
>663_bases TTGGTTTTAGAATTTCAAGGTAAATTTTACACAATTTTTCTTGATTATTCACCCAAATTTTCTAAAATTATAATAAAAAT GGTTGATGATTTTATTTTGGTTCGTTCAAATCCGGCAGTAAAACTTGAGGAACTAATAAAAATAGTTAAAAATTCTAACT TTTTTCAAAAAGTAGTGAAAATTTTGCCAAAACGTGTTATACTTAATTTTTCTGAGTCTAGTTTTTATCTTTTTGGCAAA AAATACTACTATAATTTAGTCAAAACGCAAAATAAACTTTTTTTACAAGCTGAAAATTTAGTTTTCTCCCTAACAAGAGC GCGAAATTTAGAAGCCAAAATTCAAAAAGTTTTAATGAATTTTTTTTTAAATTATCTAAAAAAAAGGACAAATTATTGAG CTCAAATTTTGGAAATTCCCAACTATGAAATCAAAATAGCGCGTAAAAATGCTGCCTGGGGAACAAATTATCGGCGAAAA AAAATTCATTATAGCTATTTTTTACTTCCTTTTTCTAAAAAAATCATTGATTATGTTATTGTCCATGAACTTGTGCACCA TTTTTTTAGCAAGCATAATAAACTTTTTTGGGAAAAAGTAGCTGAAATTATTCCTAATTATAAGGAATTAATTAGAAAAT TAAATGACTATGAACTTAATTAA
Upstream 100 bases:
>100_bases TTTAGATCACCTTTATATAGTTTAGAATTCGAAATAATTAGTAAAAATGCCAACAACATTGAAGTAAAAATAACCAAAAA TGAAAACCAGGTATAAAAAA
Downstream 100 bases:
>100_bases TAAAAAAAATTTAAATATCTATCTTTGCGGGCCAACAGTTTATAGCGATGTTCATATTGGAAATTTAAGAACTATAATTA TTTTTGATGCTATTTTTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MVLEFQGKFYTIFLDYSPKFSKIIIKMVDDFILVRSNPAVKLEELIKIVKNSNFFQKVVKILPKRVILNFSESSFYLFGK KYYYNLVKTQNKLFLQAENLVFSLTRARNLEAKIQKVLMNFFLNYLKKRTNYWAQILEIPNYEIKIARKNAAWGTNYRRK KIHYSYFLLPFSKKIIDYVIVHELVHHFFSKHNKLFWEKVAEIIPNYKELIRKLNDYELN
Sequences:
>Translated_220_residues MVLEFQGKFYTIFLDYSPKFSKIIIKMVDDFILVRSNPAVKLEELIKIVKNSNFFQKVVKILPKRVILNFSESSFYLFGK KYYYNLVKTQNKLFLQAENLVFSLTRARNLEAKIQKVLMNFFLNYLKKRTNY*AQILEIPNYEIKIARKNAAWGTNYRRK KIHYSYFLLPFSKKIIDYVIVHELVHHFFSKHNKLFWEKVAEIIPNYKELIRKLNDYELN >Mature_220_residues MVLEFQGKFYTIFLDYSPKFSKIIIKMVDDFILVRSNPAVKLEELIKIVKNSNFFQKVVKILPKRVILNFSESSFYLFGK KYYYNLVKTQNKLFLQAENLVFSLTRARNLEAKIQKVLMNFFLNYLKKRTNY*AQILEIPNYEIKIARKNAAWGTNYRRK KIHYSYFLLPFSKKIIDYVIVHELVHHFFSKHNKLFWEKVAEIIPNYKELIRKLNDYELN
Specific function: Unknown
COG id: COG1451
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26445; Mature: 26445
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLEFQGKFYTIFLDYSPKFSKIIIKMVDDFILVRSNPAVKLEELIKIVKNSNFFQKVVK CEEEECCCEEEEEEECCCCHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHCCHHHHHHHH ILPKRVILNFSESSFYLFGKKYYYNLVKTQNKLFLQAENLVFSLTRARNLEAKIQKVLMN HCCHHHEEEECCCCEEEEHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHH FFLNYLKKRTNYAQILEIPNYEIKIARKNAAWGTNYRRKKIHYSYFLLPFSKKIIDYVIV HHHHHHHHHCCCEEEEECCCCEEEEEECCCCCCCCCHHHEEEEEEEEEHHHHHHHHHHHH HELVHHFFSKHNKLFWEKVAEIIPNYKELIRKLNDYELN HHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCCCC >Mature Secondary Structure MVLEFQGKFYTIFLDYSPKFSKIIIKMVDDFILVRSNPAVKLEELIKIVKNSNFFQKVVK CEEEECCCEEEEEEECCCCHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHCCHHHHHHHH ILPKRVILNFSESSFYLFGKKYYYNLVKTQNKLFLQAENLVFSLTRARNLEAKIQKVLMN HCCHHHEEEECCCCEEEEHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHH FFLNYLKKRTNYAQILEIPNYEIKIARKNAAWGTNYRRKKIHYSYFLLPFSKKIIDYVIV HHHHHHHHHCCCEEEEECCCCEEEEEECCCCCCCCCHHHEEEEEEEEEHHHHHHHHHHHH HELVHHFFSKHNKLFWEKVAEIIPNYKELIRKLNDYELN HHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA