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The map label for this gene is rpiA

Identifier: 71892037

GI number: 71892037

Start: 299768

End: 300424

Strand: Direct

Name: rpiA

Synonym: BPEN_263

Alternate gene names: 71892037

Gene position: 299768-300424 (Clockwise)

Preceding gene: 71892036

Following gene: 71892040

Centisome position: 37.87

GC content: 31.96

Gene sequence:

>657_bases
ATGGTACAAAATAAATTAAAAAAATCAGTAGGTTGGGCGGCTTTAAAATATGTTCAATCTAGCAGAATTATAGGAGTAGG
AACAGGTTCTACTGTTACATATTTTATTGAAGCACTAAACAGTATAAAAGAAAAAATAGAAGGCGTGGTTTCCAGTTCAA
ATTACTCATCTAATCAATTAAAAAAAATAGGTATTCCTCTATGTAATCTTAATAGCTTGCACGAATTAGATGTATATGTT
GACAGTGCAGATGAAATTGATTCACATATGCAAATGATTAAAGGTAAGGGTGGGGCTTTGACAAAAGAAAAAATTATTGC
TGCTGCAGCTAAAAAATTTATTTGTATCGTTGACAGCAGTAAACAAGTAAATATATTAGGACGAGGTCCCTTGCCAATAG
AAGTCATTCCTATGGCTCGCTCATTAGTAGCAAGAGAATTAGTGCGTTTAGGTGGTTTACCAGAATATCGGCATAATGTA
ATTACTGATAATGGCAATAATATCTTAGACGTATATAACATGAAGATTGTAAATGCGTCGTTATTAGAAACCAAAATTAA
TAATATTCCAGGAGTAGTGAGTGTTGGTATATTCGCGAAAAGACGAGCAGATATAGTATTAATTGGAACAAGAGAAGGTA
TAAAAATAATTGAATAA

Upstream 100 bases:

>100_bases
TTTTGATCTATATAAAACGAAAATTATTATCAAACATCAATAATAATAGATCAAATTAGTACATGCTAATTACATAATAT
ACGTCTTGTATGGGTGTTGT

Downstream 100 bases:

>100_bases
ATATTTTTATGCTAATAAAAAATCATATTTGAACAATATAAAACTAAAAATTATTGACAATTTATATGTCAGTATAAATT
CAATATATTTTTAATATGAT

Product: ribose-5-phosphate isomerase A

Products: NA

Alternate protein names: Phosphoriboisomerase A; PRI

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MVQNKLKKSVGWAALKYVQSSRIIGVGTGSTVTYFIEALNSIKEKIEGVVSSSNYSSNQLKKIGIPLCNLNSLHELDVYV
DSADEIDSHMQMIKGKGGALTKEKIIAAAAKKFICIVDSSKQVNILGRGPLPIEVIPMARSLVARELVRLGGLPEYRHNV
ITDNGNNILDVYNMKIVNASLLETKINNIPGVVSVGIFAKRRADIVLIGTREGIKIIE

Sequences:

>Translated_218_residues
MVQNKLKKSVGWAALKYVQSSRIIGVGTGSTVTYFIEALNSIKEKIEGVVSSSNYSSNQLKKIGIPLCNLNSLHELDVYV
DSADEIDSHMQMIKGKGGALTKEKIIAAAAKKFICIVDSSKQVNILGRGPLPIEVIPMARSLVARELVRLGGLPEYRHNV
ITDNGNNILDVYNMKIVNASLLETKINNIPGVVSVGIFAKRRADIVLIGTREGIKIIE
>Mature_218_residues
MVQNKLKKSVGWAALKYVQSSRIIGVGTGSTVTYFIEALNSIKEKIEGVVSSSNYSSNQLKKIGIPLCNLNSLHELDVYV
DSADEIDSHMQMIKGKGGALTKEKIIAAAAKKFICIVDSSKQVNILGRGPLPIEVIPMARSLVARELVRLGGLPEYRHNV
ITDNGNNILDVYNMKIVNASLLETKINNIPGVVSVGIFAKRRADIVLIGTREGIKIIE

Specific function: Nonoxidative branch of the pentose phosphate pathway. [C]

COG id: COG0120

COG function: function code G; Ribose 5-phosphate isomerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribose 5-phosphate isomerase family

Homologues:

Organism=Homo sapiens, GI94536842, Length=222, Percent_Identity=37.3873873873874, Blast_Score=119, Evalue=2e-27,
Organism=Escherichia coli, GI1789280, Length=217, Percent_Identity=62.6728110599078, Blast_Score=288, Evalue=2e-79,
Organism=Caenorhabditis elegans, GI17551758, Length=215, Percent_Identity=38.1395348837209, Blast_Score=120, Evalue=4e-28,
Organism=Saccharomyces cerevisiae, GI6324669, Length=206, Percent_Identity=31.0679611650485, Blast_Score=82, Evalue=6e-17,
Organism=Drosophila melanogaster, GI281364072, Length=206, Percent_Identity=35.9223300970874, Blast_Score=96, Evalue=1e-20,

Paralogues:

None

Copy number: 740 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): RPIA_BLOPB (Q493E8)

Other databases:

- EMBL:   CP000016
- RefSeq:   YP_277767.1
- ProteinModelPortal:   Q493E8
- SMR:   Q493E8
- STRING:   Q493E8
- GeneID:   3562605
- GenomeReviews:   CP000016_GR
- KEGG:   bpn:BPEN_263
- eggNOG:   COG0120
- HOGENOM:   HBG515603
- OMA:   VFDLNSV
- ProtClustDB:   PRK00702
- BioCyc:   CBLO291272:BPEN_263-MONOMER
- HAMAP:   MF_00170
- InterPro:   IPR004788
- InterPro:   IPR020672
- PANTHER:   PTHR11934
- TIGRFAMs:   TIGR00021

Pfam domain/function: PF06026 Rib_5-P_isom_A

EC number: =5.3.1.6

Molecular weight: Translated: 23729; Mature: 23729

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQNKLKKSVGWAALKYVQSSRIIGVGTGSTVTYFIEALNSIKEKIEGVVSSSNYSSNQL
CCHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
KKIGIPLCNLNSLHELDVYVDSADEIDSHMQMIKGKGGALTKEKIIAAAAKKFICIVDSS
HHHCCCEECCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEEEEEEECC
KQVNILGRGPLPIEVIPMARSLVARELVRLGGLPEYRHNVITDNGNNILDVYNMKIVNAS
CEEEEEECCCCCEEEEHHHHHHHHHHHHHHCCCCHHHCCEEECCCCCEEEEEEEEEECHH
LLETKINNIPGVVSVGIFAKRRADIVLIGTREGIKIIE
HHHHHHCCCCCEEEECCEEECCCCEEEEECCCCCEECC
>Mature Secondary Structure
MVQNKLKKSVGWAALKYVQSSRIIGVGTGSTVTYFIEALNSIKEKIEGVVSSSNYSSNQL
CCHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
KKIGIPLCNLNSLHELDVYVDSADEIDSHMQMIKGKGGALTKEKIIAAAAKKFICIVDSS
HHHCCCEECCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEEEEEEECC
KQVNILGRGPLPIEVIPMARSLVARELVRLGGLPEYRHNVITDNGNNILDVYNMKIVNAS
CEEEEEECCCCCEEEEHHHHHHHHHHHHHHCCCCHHHCCEEECCCCCEEEEEEEEEECHH
LLETKINNIPGVVSVGIFAKRRADIVLIGTREGIKIIE
HHHHHHCCCCCEEEECCEEECCCCEEEEECCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA