Definition Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome.
Accession NC_007292
Length 791,654

Click here to switch to the map view.

The map label for this gene is secA

Identifier: 71891935

GI number: 71891935

Start: 186811

End: 189546

Strand: Direct

Name: secA

Synonym: BPEN_152

Alternate gene names: 71891935

Gene position: 186811-189546 (Clockwise)

Preceding gene: 71891934

Following gene: 71891937

Centisome position: 23.6

GC content: 30.56

Gene sequence:

>2736_bases
ATGTTAACACCATTTAAATTATTTACTAAAATTTTTAAAAATAGAAATGATCGCGTGTTACTTCGTATGAAGAAAGTGGT
GGATATGATAAATTATATGGAAAAAGATATACAAAAGTTAAATGATAGTCAACTTGCTTCTAAAACGAATGAGTTTCGCA
AATCTATTGAATCAGGTGTAAAAAACCTCGAGAATTTATTACCACAAGCATTTGCTGTAGTACGAGAATCTATTAAGAGA
ATATTTAATATACGTCTTTTTGATGTCCAATTGTTGGGAGGAATAGTTCTTAACAGTCGATGTATTGCGGAAATGAAAAC
TGGAGAAGGAAAAACTTTAACTGCTACTTTACCTGCTTATTTGAATGCATTAAGTGGTCAAGGAGTACATATTGTTACAG
TTAATAATTATTTAGCACATAGAGATGCAATAAATAATAAACCGTTATTTGAATTTTTAGGATTGACTGTTGGAATTAAT
TTACCGGGACTATCAGCATCTATGAAACGTGCAGCGTATACAGCAGATATTACCTACGGCACAAACAATGAATACGGTTT
CGATTATTTACGCGATAATATGGTTTTTGTCCCAGAAGAACGGGTACAACGAGGATTGCATTATGCGTTAATAGATGAAG
TAGATTCTATTTTGATTGATGAAGCTCGTACTCCATTAGTTATTTCTGGACCATCAGATGATACTTCTTTATTATATTCA
AAAATCAATGAATTAGTCTTTAGCATAATTCAAAAAAATAAAAGAAATATAGATAATTTACAAAAAGAAGAATATTTCAC
AGTTGATGAAAAATCCAGACAAGTTATTCTGACTGAGAATGGATTAGTATTAATAGAGCAATTATTAATTAAATCTGGAA
TCATGAACCAAGGGGAATCGTTGTATTCATCAGATAATATTATATTGATGCATCATGTTAATGCAGCATTTCGTGCTCAC
ATTTTATTTACGTGTGAAGTGGATTATCTTGTTAAAAATGGCGAAATACTTATTATTGATGAACACACAGGACGAGTTAT
GCCTGGTCGTCGATGGTCAGATGGATTGCACCAAGCAATCGAAGCGAAAGAACATGTAACTATTCAAAATGAAAATCAAA
CATTAGCTTCAATTACATTTCAAAATTATTTTCGTTTATATGAAAAATTATCTGGTATGACCGGCACCGCTAATACTGAA
GCATTTGAATTTCAATCTATCTATAAATTAGATACTATCGTTATACCGACTAATCGTCCTATGATTCGTAATGATTTTCC
AGATATAATTTATATGACGGAACATGAAAAGATTGAGGCTATCATTAATGATATCAAAGATTGTGTTAAGAGAAACCAGC
CAGTGTTGGTGGGAACTATATCCATTGAAAAATCTGAAATTATTTCTCATGCTTTAAGTCAGATCGGAATTATGCATAAA
GTTTTAAATGCGAAATTTCATGCTGCAGAAGCAGATATTATAGCACAAGCAGGATATCCTGGTGCAGTAACTATTGCTAC
GAATATGGCTGGGCGCGGCACTGACATTATATTAGGAGGAAATTGGCGGGCAGAAATTACTGCGTTGCATAAAGCAAATA
CATGTAAAATTTTAAAAATTAAATCTGATTGGAAAAAACGTCATCACGCAGTATTAAAATCTGGAGGGTTACATGTCATT
GGTACTGAACGGCATGAATCTCGCCGTATTGATAATCAATTGCGTGGACGATCTGGACGACAAGGAGATATAGGTTCGTC
TAGATTTTATTTATCCATGGAAGATTCATTAATACGTATTTTTGCTTCTAATAGATTAGTGAACATGATGAAAAAATTAG
GAATGAAATCAGGAGAATCTATTGAACATCCATGGATTACTAAAGCTATTGCTCATGCTCAAAAAAAAGTAGAAAATCGT
AATTTTGATATTAGAAAACAATTATTAGAATATGATGATGTAGCTAATGATCAACGTCGTGTTATTTATGAACAACGTGA
TAAATTATTAAATATATCAGATATCAGTGATATTATTAGAAATATTCGTTGTGATGTTGTTGAAAAATTATTTAATATTT
ATATTCCTTTAGAAATTATAGAGAACAAAAGGGATGTAATGAAATTAGAAGAATGTTTGGAAAAAGATTTTTGTTTAGAG
TTACCTCTTCTAAAATGGATAGAGGTAGAGCCCAGATTATATGAAGAAAAAGAAATATTACGTCAACGTATATTAGAAAA
TATGACACAGAAATATGAACATACTAGAAAAATAATTGGAATAGATATTATGTGTTCTTTTGAAAAAGAAATTATGTTGA
GAACGTTTGATGTACTGTGGAAAGAGCATTTAGCGTCAATGGATTATTTGCGTCAAGGAATTCATTTGAGAGGGTATGCA
CAAAAAGATCCGAAACAGGAATACAAAAGAGAATCATTCTCTATGTTTACTAAAATGTTAGATCATTTAAAATATGAAGT
AATAAGCGAAGTGAGCAAGTTAGTAATAGAATTATTCAATAAAAAAGAATCTATTTTAAATTCAACTAATAAATATAATG
ATTTTCAATCTATAAATACGCAAGTAATGAATACTAAATTGTTATCGATAGATCATTTTTTAAATCAACATACATTAACT
AAGAATAAAACAGTGAGTCGCAACGATGCTTGTCCTTGCGGATCTAATAAGAAATTTAAAGAATGTCATGGTAAAATCGT
AAATAAACGTCATTGA

Upstream 100 bases:

>100_bases
AAAATTTTCCTTGTAGTCGTATGTATTATGAACGGAAAATATGTAATTGTTGCACATTATTTAAATAATGTGCTGCCATT
GTAATGAGATATAAATTGTC

Downstream 100 bases:

>100_bases
TATATACAAAATATTTTGATTTTAACATTATTGTAATCAGTTACATAGTAAATATAAGTTGATATTATTTTTTAAATCAT
CACATTTAAATTGAATCTAT

Product: preprotein translocase subunit SecA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 911; Mature: 911

Protein sequence:

>911_residues
MLTPFKLFTKIFKNRNDRVLLRMKKVVDMINYMEKDIQKLNDSQLASKTNEFRKSIESGVKNLENLLPQAFAVVRESIKR
IFNIRLFDVQLLGGIVLNSRCIAEMKTGEGKTLTATLPAYLNALSGQGVHIVTVNNYLAHRDAINNKPLFEFLGLTVGIN
LPGLSASMKRAAYTADITYGTNNEYGFDYLRDNMVFVPEERVQRGLHYALIDEVDSILIDEARTPLVISGPSDDTSLLYS
KINELVFSIIQKNKRNIDNLQKEEYFTVDEKSRQVILTENGLVLIEQLLIKSGIMNQGESLYSSDNIILMHHVNAAFRAH
ILFTCEVDYLVKNGEILIIDEHTGRVMPGRRWSDGLHQAIEAKEHVTIQNENQTLASITFQNYFRLYEKLSGMTGTANTE
AFEFQSIYKLDTIVIPTNRPMIRNDFPDIIYMTEHEKIEAIINDIKDCVKRNQPVLVGTISIEKSEIISHALSQIGIMHK
VLNAKFHAAEADIIAQAGYPGAVTIATNMAGRGTDIILGGNWRAEITALHKANTCKILKIKSDWKKRHHAVLKSGGLHVI
GTERHESRRIDNQLRGRSGRQGDIGSSRFYLSMEDSLIRIFASNRLVNMMKKLGMKSGESIEHPWITKAIAHAQKKVENR
NFDIRKQLLEYDDVANDQRRVIYEQRDKLLNISDISDIIRNIRCDVVEKLFNIYIPLEIIENKRDVMKLEECLEKDFCLE
LPLLKWIEVEPRLYEEKEILRQRILENMTQKYEHTRKIIGIDIMCSFEKEIMLRTFDVLWKEHLASMDYLRQGIHLRGYA
QKDPKQEYKRESFSMFTKMLDHLKYEVISEVSKLVIELFNKKESILNSTNKYNDFQSINTQVMNTKLLSIDHFLNQHTLT
KNKTVSRNDACPCGSNKKFKECHGKIVNKRH

Sequences:

>Translated_911_residues
MLTPFKLFTKIFKNRNDRVLLRMKKVVDMINYMEKDIQKLNDSQLASKTNEFRKSIESGVKNLENLLPQAFAVVRESIKR
IFNIRLFDVQLLGGIVLNSRCIAEMKTGEGKTLTATLPAYLNALSGQGVHIVTVNNYLAHRDAINNKPLFEFLGLTVGIN
LPGLSASMKRAAYTADITYGTNNEYGFDYLRDNMVFVPEERVQRGLHYALIDEVDSILIDEARTPLVISGPSDDTSLLYS
KINELVFSIIQKNKRNIDNLQKEEYFTVDEKSRQVILTENGLVLIEQLLIKSGIMNQGESLYSSDNIILMHHVNAAFRAH
ILFTCEVDYLVKNGEILIIDEHTGRVMPGRRWSDGLHQAIEAKEHVTIQNENQTLASITFQNYFRLYEKLSGMTGTANTE
AFEFQSIYKLDTIVIPTNRPMIRNDFPDIIYMTEHEKIEAIINDIKDCVKRNQPVLVGTISIEKSEIISHALSQIGIMHK
VLNAKFHAAEADIIAQAGYPGAVTIATNMAGRGTDIILGGNWRAEITALHKANTCKILKIKSDWKKRHHAVLKSGGLHVI
GTERHESRRIDNQLRGRSGRQGDIGSSRFYLSMEDSLIRIFASNRLVNMMKKLGMKSGESIEHPWITKAIAHAQKKVENR
NFDIRKQLLEYDDVANDQRRVIYEQRDKLLNISDISDIIRNIRCDVVEKLFNIYIPLEIIENKRDVMKLEECLEKDFCLE
LPLLKWIEVEPRLYEEKEILRQRILENMTQKYEHTRKIIGIDIMCSFEKEIMLRTFDVLWKEHLASMDYLRQGIHLRGYA
QKDPKQEYKRESFSMFTKMLDHLKYEVISEVSKLVIELFNKKESILNSTNKYNDFQSINTQVMNTKLLSIDHFLNQHTLT
KNKTVSRNDACPCGSNKKFKECHGKIVNKRH
>Mature_911_residues
MLTPFKLFTKIFKNRNDRVLLRMKKVVDMINYMEKDIQKLNDSQLASKTNEFRKSIESGVKNLENLLPQAFAVVRESIKR
IFNIRLFDVQLLGGIVLNSRCIAEMKTGEGKTLTATLPAYLNALSGQGVHIVTVNNYLAHRDAINNKPLFEFLGLTVGIN
LPGLSASMKRAAYTADITYGTNNEYGFDYLRDNMVFVPEERVQRGLHYALIDEVDSILIDEARTPLVISGPSDDTSLLYS
KINELVFSIIQKNKRNIDNLQKEEYFTVDEKSRQVILTENGLVLIEQLLIKSGIMNQGESLYSSDNIILMHHVNAAFRAH
ILFTCEVDYLVKNGEILIIDEHTGRVMPGRRWSDGLHQAIEAKEHVTIQNENQTLASITFQNYFRLYEKLSGMTGTANTE
AFEFQSIYKLDTIVIPTNRPMIRNDFPDIIYMTEHEKIEAIINDIKDCVKRNQPVLVGTISIEKSEIISHALSQIGIMHK
VLNAKFHAAEADIIAQAGYPGAVTIATNMAGRGTDIILGGNWRAEITALHKANTCKILKIKSDWKKRHHAVLKSGGLHVI
GTERHESRRIDNQLRGRSGRQGDIGSSRFYLSMEDSLIRIFASNRLVNMMKKLGMKSGESIEHPWITKAIAHAQKKVENR
NFDIRKQLLEYDDVANDQRRVIYEQRDKLLNISDISDIIRNIRCDVVEKLFNIYIPLEIIENKRDVMKLEECLEKDFCLE
LPLLKWIEVEPRLYEEKEILRQRILENMTQKYEHTRKIIGIDIMCSFEKEIMLRTFDVLWKEHLASMDYLRQGIHLRGYA
QKDPKQEYKRESFSMFTKMLDHLKYEVISEVSKLVIELFNKKESILNSTNKYNDFQSINTQVMNTKLLSIDHFLNQHTLT
KNKTVSRNDACPCGSNKKFKECHGKIVNKRH

Specific function: Part of the Sec protein translocase complex. Interacts with the secYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the pr

COG id: COG0653

COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Cytoplasm (By similarity). Note=Distribution is 50-50 (By similarity)

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secA family

Homologues:

Organism=Escherichia coli, GI1786287, Length=902, Percent_Identity=66.1862527716186, Blast_Score=1272, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SECA_BLOPB (Q493P5)

Other databases:

- EMBL:   CP000016
- RefSeq:   YP_277665.1
- HSSP:   P10408
- ProteinModelPortal:   Q493P5
- SMR:   Q493P5
- STRING:   Q493P5
- GeneID:   3563087
- GenomeReviews:   CP000016_GR
- KEGG:   bpn:BPEN_152
- eggNOG:   COG0653
- HOGENOM:   HBG284200
- OMA:   GGMVLHD
- ProtClustDB:   PRK12904
- BioCyc:   CBLO291272:BPEN_152-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01382
- InterPro:   IPR004027
- InterPro:   IPR000185
- InterPro:   IPR020937
- InterPro:   IPR011115
- InterPro:   IPR014018
- InterPro:   IPR011130
- InterPro:   IPR011116
- Gene3D:   G3DSA:1.10.3060.10
- PRINTS:   PR00906
- SMART:   SM00957
- SMART:   SM00958
- TIGRFAMs:   TIGR00963

Pfam domain/function: PF02810 SEC-C; PF07517 SecA_DEAD; PF01043 SecA_PP_bind; PF07516 SecA_SW; SSF81767 SecA_PP_bd; SSF81886 SecA_SW

EC number: NA

Molecular weight: Translated: 104909; Mature: 104909

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: PS01312 SECA; PS51196 SECA_MOTOR_DEAD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTPFKLFTKIFKNRNDRVLLRMKKVVDMINYMEKDIQKLNDSQLASKTNEFRKSIESGV
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
KNLENLLPQAFAVVRESIKRIFNIRLFDVQLLGGIVLNSRCIAEMKTGEGKTLTATLPAY
HHHHHHHHHHHHHHHHHHHHHHCEEEEEHHHHHHHHCCCHHHHHEECCCCCEEEEEHHHH
LNALSGQGVHIVTVNNYLAHRDAINNKPLFEFLGLTVGINLPGLSASMKRAAYTADITYG
HHHHCCCCEEEEEECCHHHHHHCCCCCCHHHHHCHHEECCCCCCCHHHHHHEEEEEEEEC
TNNEYGFDYLRDNMVFVPEERVQRGLHYALIDEVDSILIDEARTPLVISGPSDDTSLLYS
CCCCCCCHHHHCCEEECCHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHH
KINELVFSIIQKNKRNIDNLQKEEYFTVDEKSRQVILTENGLVLIEQLLIKSGIMNQGES
HHHHHHHHHHHHCCCCHHHHHHHHCEEECCCCCEEEEECCCHHHHHHHHHHHCCCCCCCH
LYSSDNIILMHHVNAAFRAHILFTCEVDYLVKNGEILIIDEHTGRVMPGRRWSDGLHQAI
HCCCCCEEEEEECCCEEEEEEEEEEEEEEEEECCCEEEEECCCCCCCCCCCCHHHHHHHH
EAKEHVTIQNENQTLASITFQNYFRLYEKLSGMTGTANTEAFEFQSIYKLDTIVIPTNRP
HHHHCEEEECCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHEEEEEEEECCCCC
MIRNDFPDIIYMTEHEKIEAIINDIKDCVKRNQPVLVGTISIEKSEIISHALSQIGIMHK
CCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHH
VLNAKFHAAEADIIAQAGYPGAVTIATNMAGRGTDIILGGNWRAEITALHKANTCKILKI
HHCCHHCCCCHHHEEECCCCCEEEEEECCCCCCCEEEECCCCEEEEEEEECCCCEEEEEE
KSDWKKRHHAVLKSGGLHVIGTERHESRRIDNQLRGRSGRQGDIGSSRFYLSMEDSLIRI
CHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECHHHHHH
FASNRLVNMMKKLGMKSGESIEHPWITKAIAHAQKKVENRNFDIRKQLLEYDDVANDQRR
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHH
VIYEQRDKLLNISDISDIIRNIRCDVVEKLFNIYIPLEIIENKRDVMKLEECLEKDFCLE
HHHHHHHCEECHHHHHHHHHHHHHHHHHHHHHHEECHHHHCCHHHHHHHHHHHCCCCCCC
LPLLKWIEVEPRLYEEKEILRQRILENMTQKYEHTRKIIGIDIMCSFEKEIMLRTFDVLW
CCCHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCHHHHHHHHHHHHH
KEHLASMDYLRQGIHLRGYAQKDPKQEYKRESFSMFTKMLDHLKYEVISEVSKLVIELFN
HHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKESILNSTNKYNDFQSINTQVMNTKLLSIDHFLNQHTLTKNKTVSRNDACPCGSNKKFK
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHH
ECHGKIVNKRH
HHHHHHCCCCC
>Mature Secondary Structure
MLTPFKLFTKIFKNRNDRVLLRMKKVVDMINYMEKDIQKLNDSQLASKTNEFRKSIESGV
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
KNLENLLPQAFAVVRESIKRIFNIRLFDVQLLGGIVLNSRCIAEMKTGEGKTLTATLPAY
HHHHHHHHHHHHHHHHHHHHHHCEEEEEHHHHHHHHCCCHHHHHEECCCCCEEEEEHHHH
LNALSGQGVHIVTVNNYLAHRDAINNKPLFEFLGLTVGINLPGLSASMKRAAYTADITYG
HHHHCCCCEEEEEECCHHHHHHCCCCCCHHHHHCHHEECCCCCCCHHHHHHEEEEEEEEC
TNNEYGFDYLRDNMVFVPEERVQRGLHYALIDEVDSILIDEARTPLVISGPSDDTSLLYS
CCCCCCCHHHHCCEEECCHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHH
KINELVFSIIQKNKRNIDNLQKEEYFTVDEKSRQVILTENGLVLIEQLLIKSGIMNQGES
HHHHHHHHHHHHCCCCHHHHHHHHCEEECCCCCEEEEECCCHHHHHHHHHHHCCCCCCCH
LYSSDNIILMHHVNAAFRAHILFTCEVDYLVKNGEILIIDEHTGRVMPGRRWSDGLHQAI
HCCCCCEEEEEECCCEEEEEEEEEEEEEEEEECCCEEEEECCCCCCCCCCCCHHHHHHHH
EAKEHVTIQNENQTLASITFQNYFRLYEKLSGMTGTANTEAFEFQSIYKLDTIVIPTNRP
HHHHCEEEECCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHEEEEEEEECCCCC
MIRNDFPDIIYMTEHEKIEAIINDIKDCVKRNQPVLVGTISIEKSEIISHALSQIGIMHK
CCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHH
VLNAKFHAAEADIIAQAGYPGAVTIATNMAGRGTDIILGGNWRAEITALHKANTCKILKI
HHCCHHCCCCHHHEEECCCCCEEEEEECCCCCCCEEEECCCCEEEEEEEECCCCEEEEEE
KSDWKKRHHAVLKSGGLHVIGTERHESRRIDNQLRGRSGRQGDIGSSRFYLSMEDSLIRI
CHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECHHHHHH
FASNRLVNMMKKLGMKSGESIEHPWITKAIAHAQKKVENRNFDIRKQLLEYDDVANDQRR
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHH
VIYEQRDKLLNISDISDIIRNIRCDVVEKLFNIYIPLEIIENKRDVMKLEECLEKDFCLE
HHHHHHHCEECHHHHHHHHHHHHHHHHHHHHHHEECHHHHCCHHHHHHHHHHHCCCCCCC
LPLLKWIEVEPRLYEEKEILRQRILENMTQKYEHTRKIIGIDIMCSFEKEIMLRTFDVLW
CCCHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCHHHHHHHHHHHHH
KEHLASMDYLRQGIHLRGYAQKDPKQEYKRESFSMFTKMLDHLKYEVISEVSKLVIELFN
HHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKESILNSTNKYNDFQSINTQVMNTKLLSIDHFLNQHTLTKNKTVSRNDACPCGSNKKFK
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHH
ECHGKIVNKRH
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA