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The map label for this gene is yhcB [H]

Identifier: 71891840

GI number: 71891840

Start: 60426

End: 60824

Strand: Reverse

Name: yhcB [H]

Synonym: BPEN_049

Alternate gene names: 71891840

Gene position: 60824-60426 (Counterclockwise)

Preceding gene: 71891843

Following gene: 71891839

Centisome position: 7.68

GC content: 23.56

Gene sequence:

>399_bases
ATGATATGGATATGTATATTAGTAAGCTTAATAATTGGAATTATTATAGGAGCATTTATAATGTATTATAAAGCACGCTA
TTTACTACATAATCAAAAAACTTTATATAATGAATTACAAGATAAAAAAGTTAAACTAAATGAATACCAAAAGGAATTAA
GTAATCACTTTATTTACACTATAAAATTATTAAACAAAATAGAAGATGATTACCGTCACTTATCTCATAACGTCAAAAAA
AGCGCTAATTTTTTTTTACCAAATACACATATACAAGATGATATACACGCATTTAATACAAAAAAAACAACTATAAAAAA
CGAACAATTACCAATAGCAGCGCCGTTAGATTATTCCAGTAATACGGAAAATACAATAAAAAATCATGATAATGAATAA

Upstream 100 bases:

>100_bases
ACTATTATACCGATAACATATCAACATATGCAAAAATTATATATCAATCAGTTAACATACAAAAATGAACACATAAATAA
AATAATTTAGGAGTATTATC

Downstream 100 bases:

>100_bases
TATAAGGAAACTTTTATTAGTTTATATAAATTATTCGATTTCTTATTATACTATGCACATAGTATAATAATATGCAATAT
AGGTAATTCATCTGTCTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Cytochrome bd-I oxidase subunit III [H]

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MIWICILVSLIIGIIIGAFIMYYKARYLLHNQKTLYNELQDKKVKLNEYQKELSNHFIYTIKLLNKIEDDYRHLSHNVKK
SANFFLPNTHIQDDIHAFNTKKTTIKNEQLPIAAPLDYSSNTENTIKNHDNE

Sequences:

>Translated_132_residues
MIWICILVSLIIGIIIGAFIMYYKARYLLHNQKTLYNELQDKKVKLNEYQKELSNHFIYTIKLLNKIEDDYRHLSHNVKK
SANFFLPNTHIQDDIHAFNTKKTTIKNEQLPIAAPLDYSSNTENTIKNHDNE
>Mature_132_residues
MIWICILVSLIIGIIIGAFIMYYKARYLLHNQKTLYNELQDKKVKLNEYQKELSNHFIYTIKLLNKIEDDYRHLSHNVKK
SANFFLPNTHIQDDIHAFNTKKTTIKNEQLPIAAPLDYSSNTENTIKNHDNE

Specific function: Unknown

COG id: COG3105

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1628 [H]

Homologues:

Organism=Escherichia coli, GI87082232, Length=127, Percent_Identity=33.0708661417323, Blast_Score=76, Evalue=8e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009386 [H]

Pfam domain/function: PF06295 DUF1043 [H]

EC number: NA

Molecular weight: Translated: 15594; Mature: 15594

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIWICILVSLIIGIIIGAFIMYYKARYLLHNQKTLYNELQDKKVKLNEYQKELSNHFIYT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKLLNKIEDDYRHLSHNVKKSANFFLPNTHIQDDIHAFNTKKTTIKNEQLPIAAPLDYSS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCEECCCCCCEECCCCCCC
NTENTIKNHDNE
CCCCCCCCCCCC
>Mature Secondary Structure
MIWICILVSLIIGIIIGAFIMYYKARYLLHNQKTLYNELQDKKVKLNEYQKELSNHFIYT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKLLNKIEDDYRHLSHNVKKSANFFLPNTHIQDDIHAFNTKKTTIKNEQLPIAAPLDYSS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCEECCCCCCEECCCCCCC
NTENTIKNHDNE
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]