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The map label for this gene is yjgF [C]

Identifier: 71891823

GI number: 71891823

Start: 39009

End: 39410

Strand: Reverse

Name: yjgF [C]

Synonym: BPEN_031

Alternate gene names: 71891823

Gene position: 39410-39009 (Counterclockwise)

Preceding gene: 71891824

Following gene: 71891818

Centisome position: 4.98

GC content: 31.84

Gene sequence:

>402_bases
ATGCTTCAGGTTATCAGTACAAAAAAATCTCCCATCCCTCTTGGACCTTATGTGCAAGCGATAGACATAGGAAACATAAC
ATTTGTATCTGGGCAAATAGGAATGCGCCCAGATACAAATGTTATCCCCGACAACATTTACGATCAAACGTATCAATCAC
TAGAAAATATCAAAAATATCATAGAAACCGCTGGTCTACAAATCAATAATATTATTAAAACTACATTATTCATTGTTGAT
ATCAATGATATTCCTACTATAAATGTCAGCTATATGAAATTTTTTCATTCATCTTCTTTACATGAAGATATAATTTTACC
AACACGTTCCTGTGTAGAGGTTTCTAGATTACCAAAGAATGCTAAAATAGAAATCGATGCTATTGCTACACGTATTTTAT
AA

Upstream 100 bases:

>100_bases
TAATTTTAATCAATAGTAATAGAATAGGATTCTATTATTTTTTATATAAATACTAAAAATAATACCTTATTTTTAACGCA
AATTCATTAGGATAAATTAT

Downstream 100 bases:

>100_bases
ATTTAATAATAATCGTGAAAATAAAACACTAATAAACAACAAACGAACAAATTATTTCGCATAATCCCTATTATTATAGA
AATGCTCTCACGGTTATTTA

Product: putative translation initiation inhibitor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MLQVISTKKSPIPLGPYVQAIDIGNITFVSGQIGMRPDTNVIPDNIYDQTYQSLENIKNIIETAGLQINNIIKTTLFIVD
INDIPTINVSYMKFFHSSSLHEDIILPTRSCVEVSRLPKNAKIEIDAIATRIL

Sequences:

>Translated_133_residues
MLQVISTKKSPIPLGPYVQAIDIGNITFVSGQIGMRPDTNVIPDNIYDQTYQSLENIKNIIETAGLQINNIIKTTLFIVD
INDIPTINVSYMKFFHSSSLHEDIILPTRSCVEVSRLPKNAKIEIDAIATRIL
>Mature_133_residues
MLQVISTKKSPIPLGPYVQAIDIGNITFVSGQIGMRPDTNVIPDNIYDQTYQSLENIKNIIETAGLQINNIIKTTLFIVD
INDIPTINVSYMKFFHSSSLHEDIILPTRSCVEVSRLPKNAKIEIDAIATRIL

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Homo sapiens, GI5032215, Length=128, Percent_Identity=37.5, Blast_Score=103, Evalue=4e-23,
Organism=Escherichia coli, GI87082396, Length=131, Percent_Identity=47.3282442748092, Blast_Score=138, Evalue=1e-34,
Organism=Escherichia coli, GI87082213, Length=131, Percent_Identity=48.8549618320611, Blast_Score=134, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI71982075, Length=127, Percent_Identity=34.6456692913386, Blast_Score=101, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI25148896, Length=127, Percent_Identity=34.6456692913386, Blast_Score=101, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI71982068, Length=127, Percent_Identity=34.6456692913386, Blast_Score=101, Evalue=1e-22,
Organism=Saccharomyces cerevisiae, GI6322138, Length=128, Percent_Identity=35.15625, Blast_Score=86, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6320899, Length=111, Percent_Identity=33.3333333333333, Blast_Score=80, Evalue=1e-16,
Organism=Drosophila melanogaster, GI19921376, Length=128, Percent_Identity=32.8125, Blast_Score=86, Evalue=5e-18,

Paralogues:

None

Copy number: 1320 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR006056
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 14855; Mature: 14855

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: PS01094 UPF0076

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQVISTKKSPIPLGPYVQAIDIGNITFVSGQIGMRPDTNVIPDNIYDQTYQSLENIKNI
CCEEECCCCCCCCCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
IETAGLQINNIIKTTLFIVDINDIPTINVSYMKFFHSSSLHEDIILPTRSCVEVSRLPKN
HHHCCCEECCEEEEEEEEEECCCCCCCCHHHHHHHHCCCCCCCEECCCHHHHHHHHCCCC
AKIEIDAIATRIL
CCEEHHHHHHHCC
>Mature Secondary Structure
MLQVISTKKSPIPLGPYVQAIDIGNITFVSGQIGMRPDTNVIPDNIYDQTYQSLENIKNI
CCEEECCCCCCCCCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
IETAGLQINNIIKTTLFIVDINDIPTINVSYMKFFHSSSLHEDIILPTRSCVEVSRLPKN
HHHCCCEECCEEEEEEEEEECCCCCCCCHHHHHHHHCCCCCCCEECCCHHHHHHHHCCCC
AKIEIDAIATRIL
CCEEHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]