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The map label for this gene is atpH

Identifier: 71891798

GI number: 71891798

Start: 4248

End: 4793

Strand: Direct

Name: atpH

Synonym: BPEN_005

Alternate gene names: 71891798

Gene position: 4248-4793 (Clockwise)

Preceding gene: 71891797

Following gene: 71891799

Centisome position: 0.54

GC content: 28.75

Gene sequence:

>546_bases
ATGTCTAGTATGCTTGTGGTTGCGCGTACGTATGCTCAAGCTATATTTGATATAGCTGTAGAACAGAAAAATATAAACAA
GTGGAAATCAGTTCTTGATTTATTTTCTGAGATTAGTCTAAATAGACTAGTACAATCTTTATTTTTTAGATGTTTAGAAC
CAAAAAGATTGTCAGATATATTTATTGCTATTTGTGAAGATTACCAAAAGAAACAAGTTGATACCTTCAGTAAAAATATA
ATCTATATTATGGCGGAAAATAATCGTTTATTATTATTACCAATTGTATTTAAAGAGTTTACTTATTTATGTTCTATATA
TGTTCATACTGTAGAAATAGAAATTATCTCTGCTTGGCCTTTGAAGTATAATCAGCTGAAAAAAATTACTGATATAATGG
CTAAACGTTTATCTAAAACAGTGAATCCAGTACACAAAGTAGATAAAGATATATTGGCTGGTGTAATTATTCGTATTGGA
GATACTGTGATTGATGGAAGTATACGTGGACGTATTTTTCGCTTAAATCACGTACTACAATCTTAA

Upstream 100 bases:

>100_bases
AATTGAGGGTACAGAGAAAGTTATAGAACATTCTATAAATGAAATGATTGATATAGATCTTTTAAATAATATTATTAATA
CGTTGTCATATAAGGATTAG

Downstream 100 bases:

>100_bases
TATTTTAACAGTAGTTAAAAGGTATAAACAAAAGATTATGCAATTAAATTCAAATGAAATTAGTAAATTAATTAAGCGAC
GTATTGCCCAATTTGATATA

Product: ATP synthase, F1 sector, delta-subunit

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MSSMLVVARTYAQAIFDIAVEQKNINKWKSVLDLFSEISLNRLVQSLFFRCLEPKRLSDIFIAICEDYQKKQVDTFSKNI
IYIMAENNRLLLLPIVFKEFTYLCSIYVHTVEIEIISAWPLKYNQLKKITDIMAKRLSKTVNPVHKVDKDILAGVIIRIG
DTVIDGSIRGRIFRLNHVLQS

Sequences:

>Translated_181_residues
MSSMLVVARTYAQAIFDIAVEQKNINKWKSVLDLFSEISLNRLVQSLFFRCLEPKRLSDIFIAICEDYQKKQVDTFSKNI
IYIMAENNRLLLLPIVFKEFTYLCSIYVHTVEIEIISAWPLKYNQLKKITDIMAKRLSKTVNPVHKVDKDILAGVIIRIG
DTVIDGSIRGRIFRLNHVLQS
>Mature_180_residues
SSMLVVARTYAQAIFDIAVEQKNINKWKSVLDLFSEISLNRLVQSLFFRCLEPKRLSDIFIAICEDYQKKQVDTFSKNII
YIMAENNRLLLLPIVFKEFTYLCSIYVHTVEIEIISAWPLKYNQLKKITDIMAKRLSKTVNPVHKVDKDILAGVIIRIGD
TVIDGSIRGRIFRLNHVLQS

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family

Homologues:

Organism=Escherichia coli, GI1790173, Length=181, Percent_Identity=44.7513812154696, Blast_Score=162, Evalue=9e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPD_BLOPB (Q494C6)

Other databases:

- EMBL:   CP000016
- RefSeq:   YP_277527.1
- ProteinModelPortal:   Q494C6
- SMR:   Q494C6
- STRING:   Q494C6
- GeneID:   3562786
- GenomeReviews:   CP000016_GR
- KEGG:   bpn:BPEN_005
- eggNOG:   COG0712
- HOGENOM:   HBG668108
- OMA:   ISKINIM
- ProtClustDB:   CLSK280617
- BioCyc:   CBLO291272:BPEN_005-MONOMER
- HAMAP:   MF_01416
- InterPro:   IPR000711
- Gene3D:   G3DSA:1.10.520.20
- PANTHER:   PTHR11910
- PRINTS:   PR00125
- TIGRFAMs:   TIGR01145

Pfam domain/function: PF00213 OSCP; SSF47928 ATPsynt_OSCP

EC number: 3.6.3.14

Molecular weight: Translated: 20981; Mature: 20850

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSMLVVARTYAQAIFDIAVEQKNINKWKSVLDLFSEISLNRLVQSLFFRCLEPKRLSDI
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
FIAICEDYQKKQVDTFSKNIIYIMAENNRLLLLPIVFKEFTYLCSIYVHTVEIEIISAWP
HHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEHHHHHHHHHHHHHHHHEEEEEEEEEECC
LKYNQLKKITDIMAKRLSKTVNPVHKVDKDILAGVIIRIGDTVIDGSIRGRIFRLNHVLQ
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHC
S
C
>Mature Secondary Structure 
SSMLVVARTYAQAIFDIAVEQKNINKWKSVLDLFSEISLNRLVQSLFFRCLEPKRLSDI
CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
FIAICEDYQKKQVDTFSKNIIYIMAENNRLLLLPIVFKEFTYLCSIYVHTVEIEIISAWP
HHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEHHHHHHHHHHHHHHHHEEEEEEEEEECC
LKYNQLKKITDIMAKRLSKTVNPVHKVDKDILAGVIIRIGDTVIDGSIRGRIFRLNHVLQ
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHC
S
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA