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The map label for this gene is atpF

Identifier: 71891797

GI number: 71891797

Start: 3765

End: 4247

Strand: Direct

Name: atpF

Synonym: BPEN_004

Alternate gene names: 71891797

Gene position: 3765-4247 (Clockwise)

Preceding gene: 71891796

Following gene: 71891798

Centisome position: 0.48

GC content: 30.23

Gene sequence:

>483_bases
GTGAATCTTAATGCAACAATATTAGGTCAAACTATTTCATTTGTTTTGTTTGTTTGGTTTTGTATGAAGTATGTGTGGTA
TCCATTTATATCTATTATTGAGAAACGCCAAAAAGAAATTTCTGATAATTTAGTTTCTGCTACTCATGCCAAAACAGAAT
CTGAGCGTGTCAATGCTGAAGCTTTGCTTTGTTTGAGACAGGCTCGGGTCAAAGCTCAAGAAATTATAAAACAAGCAAAT
AAATGTAAAATGCAAATAATTAATGAAGCTAAACATGAAGCTGAAAAGGAGCAAAGTAGAATTTTATCTCAAGCGCGAGA
ACAGATTATTTATGAAAGAAAACGTGTTACTGACGAATTAAGAAAGCAAATTAGCGAACTTGTAATTGAGGGTACAGAGA
AAGTTATAGAACATTCTATAAATGAAATGATTGATATAGATCTTTTAAATAATATTATTAATACGTTGTCATATAAGGAT
TAG

Upstream 100 bases:

>100_bases
CTGTAGGTCTTGGTTTGTATGTGATGTTTTCTGCGGTTTAACAATGAAAATTAATTGCATGTATTTATTATATTGATTAT
TAAATATCAGGATTTGCGCT

Downstream 100 bases:

>100_bases
ATGTCTAGTATGCTTGTGGTTGCGCGTACGTATGCTCAAGCTATATTTGATATAGCTGTAGAACAGAAAAATATAAACAA
GTGGAAATCAGTTCTTGATT

Product: F0F1 ATP synthase subunit B

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MNLNATILGQTISFVLFVWFCMKYVWYPFISIIEKRQKEISDNLVSATHAKTESERVNAEALLCLRQARVKAQEIIKQAN
KCKMQIINEAKHEAEKEQSRILSQAREQIIYERKRVTDELRKQISELVIEGTEKVIEHSINEMIDIDLLNNIINTLSYKD

Sequences:

>Translated_160_residues
MNLNATILGQTISFVLFVWFCMKYVWYPFISIIEKRQKEISDNLVSATHAKTESERVNAEALLCLRQARVKAQEIIKQAN
KCKMQIINEAKHEAEKEQSRILSQAREQIIYERKRVTDELRKQISELVIEGTEKVIEHSINEMIDIDLLNNIINTLSYKD
>Mature_160_residues
MNLNATILGQTISFVLFVWFCMKYVWYPFISIIEKRQKEISDNLVSATHAKTESERVNAEALLCLRQARVKAQEIIKQAN
KCKMQIINEAKHEAEKEQSRILSQAREQIIYERKRVTDELRKQISELVIEGTEKVIEHSINEMIDIDLLNNIINTLSYKD

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

Organism=Escherichia coli, GI1790174, Length=156, Percent_Identity=51.9230769230769, Blast_Score=167, Evalue=3e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_BLOPB (Q494C7)

Other databases:

- EMBL:   CP000016
- RefSeq:   YP_277526.1
- ProteinModelPortal:   Q494C7
- STRING:   Q494C7
- GeneID:   3562785
- GenomeReviews:   CP000016_GR
- KEGG:   bpn:BPEN_004
- eggNOG:   COG0711
- HOGENOM:   HBG617328
- OMA:   ANATRQA
- ProtClustDB:   PRK05759
- BioCyc:   CBLO291272:BPEN_004-MONOMER
- HAMAP:   MF_01398
- InterPro:   IPR002146
- InterPro:   IPR005864
- TIGRFAMs:   TIGR01144

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 18711; Mature: 18711

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x10d575ac)-;

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLNATILGQTISFVLFVWFCMKYVWYPFISIIEKRQKEISDNLVSATHAKTESERVNAE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALLCLRQARVKAQEIIKQANKCKMQIINEAKHEAEKEQSRILSQAREQIIYERKRVTDEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKQISELVIEGTEKVIEHSINEMIDIDLLNNIINTLSYKD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
>Mature Secondary Structure
MNLNATILGQTISFVLFVWFCMKYVWYPFISIIEKRQKEISDNLVSATHAKTESERVNAE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALLCLRQARVKAQEIIKQANKCKMQIINEAKHEAEKEQSRILSQAREQIIYERKRVTDEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKQISELVIEGTEKVIEHSINEMIDIDLLNNIINTLSYKD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA