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The map label for this gene is xseB [H]

Identifier: 68536537

GI number: 68536537

Start: 1710032

End: 1710319

Strand: Direct

Name: xseB [H]

Synonym: jk1451

Alternate gene names: 68536537

Gene position: 1710032-1710319 (Clockwise)

Preceding gene: 68536536

Following gene: 68536539

Centisome position: 69.44

GC content: 59.03

Gene sequence:

>288_bases
ATGGCGGACAACACCAACAACGGCGCCAACAACACCGACAACGGCGAGCAGCAGAAGTTTCGCCCGCTCAACCAGCTGAG
TTACGAGCAGGCGCGCGATGAGCTGGTAGAGGTCGTCAAAATCCTCGAGCTCGGGCAGATGAGTCTCGACGAATCTTTGA
ACTACTGGGAACGCGGCGAGGAACTGGCCGCATACTGCGAGGACTACCTCAACGGCGCATCCAAGCGCATCGAACAGGCA
CTACAACAGCGTGAAGCACGCAACGCCGAGGCACAGGACGAAGGCTAG

Upstream 100 bases:

>100_bases
ATGGGCGTGCAGGCGGCACCTGGGGGCGTCATGAATAAAAACAGCAACACAACAGACAGCACCGACAACACCGAGAACGG
CACAGGAGAGGCATAAGACA

Downstream 100 bases:

>100_bases
TTCGCGTCGGAATCGTCAATTGGCTTCGCCGCGGCGATCTTCTCCGCGGCGGTGCGAGTCTGCTCCTGGGAAGCCATCGC
TTCAATAACCAGGCGCACAT

Product: exodeoxyribonuclease VII small subunit

Products: NA

Alternate protein names: Exodeoxyribonuclease VII small subunit; Exonuclease VII small subunit [H]

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MADNTNNGANNTDNGEQQKFRPLNQLSYEQARDELVEVVKILELGQMSLDESLNYWERGEELAAYCEDYLNGASKRIEQA
LQQREARNAEAQDEG

Sequences:

>Translated_95_residues
MADNTNNGANNTDNGEQQKFRPLNQLSYEQARDELVEVVKILELGQMSLDESLNYWERGEELAAYCEDYLNGASKRIEQA
LQQREARNAEAQDEG
>Mature_94_residues
ADNTNNGANNTDNGEQQKFRPLNQLSYEQARDELVEVVKILELGQMSLDESLNYWERGEELAAYCEDYLNGASKRIEQAL
QQREARNAEAQDEG

Specific function: Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides [H]

COG id: COG1722

COG function: function code L; Exonuclease VII small subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xseB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003761
- ProDom:   PD028235 [H]

Pfam domain/function: PF02609 Exonuc_VII_S [H]

EC number: =3.1.11.6 [H]

Molecular weight: Translated: 10840; Mature: 10709

Theoretical pI: Translated: 3.98; Mature: 3.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADNTNNGANNTDNGEQQKFRPLNQLSYEQARDELVEVVKILELGQMSLDESLNYWERGE
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELAAYCEDYLNGASKRIEQALQQREARNAEAQDEG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
ADNTNNGANNTDNGEQQKFRPLNQLSYEQARDELVEVVKILELGQMSLDESLNYWERGE
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELAAYCEDYLNGASKRIEQALQQREARNAEAQDEG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA