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The map label for this gene is dedA [C]

Identifier: 68536434

GI number: 68536434

Start: 1595483

End: 1596163

Strand: Direct

Name: dedA [C]

Synonym: jk1349

Alternate gene names: 68536434

Gene position: 1595483-1596163 (Clockwise)

Preceding gene: 68536433

Following gene: 68536443

Centisome position: 64.79

GC content: 57.71

Gene sequence:

>681_bases
ATGACCGATGTAACTGTGCTGGCCCTCGGGCCGCAATGGTTCGACCCGATGTATCTGCTTTCGGGTTCCGGACCTTTCGG
CGCGGCGATCCTGCCCGCCATTTTTGCGATTATCTTCATCGAATCCGGACTATTCTTCCCATTCTTGCCCGGCGATTCCT
TACTCTTCACCGCAGGCCTGCTGGCCAGCCAACCCGATGGCTTCGCACCTCTGTGGCAGGTGCTGCTGATTACCCCGATC
GCGGCGATCCTGGGTGACCAGGTGGGCTATTGGATTGGCCACCGCTTCCACCCTGCGCTACGCAATCGGAAGGACGGACG
TTTCTTTAAGCAAGAGCACCTGCACCGCTCCGAAGCGTTCTTTGAAAAGTACGGTTCGATCACGATCATCCTGTGCCGCT
TCGTGCCCTTCGTGCGCACCTATGCCCCGCTAGTAGCTGGAATGTCAGGCATGCGTTACCGCACGTTCATTGTCTTTAAC
ATCATCGGCGGTGTGCTGTGGGCCAGCGGCATCGTCTACCTGGGATCACTGTTCGGCGGTGTAGAGTTTGTGCGCAACAA
TATCGAGGCCATCTTCCTCGGTCTCGTCGCCTTCTCCGTCGTCCCGATGCTATTCGGATTGATACAGAAAAGCCGGAGTC
AGAGGCAGCAATCCTCCGCTCCGGCTAGCGCCCAGGATTAG

Upstream 100 bases:

>100_bases
GCTGCAAGAGTCACTCCGGGCTGGTTGAGAGTAAATTCGCTAGCTTTTAACAGGCGCCACTCTAACTATTACCGGGCAAA
GTAGAGTAGCGTTTTCCTGC

Downstream 100 bases:

>100_bases
TTTCCGGTCTTATCCGGTGACATCCACCTCGACCGGCCCGGCGATACCCAACTCCAGGACCTTCATCCCGCGGCCTCGGG
CCTCTTCGACCAATGCATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MTDVTVLALGPQWFDPMYLLSGSGPFGAAILPAIFAIIFIESGLFFPFLPGDSLLFTAGLLASQPDGFAPLWQVLLITPI
AAILGDQVGYWIGHRFHPALRNRKDGRFFKQEHLHRSEAFFEKYGSITIILCRFVPFVRTYAPLVAGMSGMRYRTFIVFN
IIGGVLWASGIVYLGSLFGGVEFVRNNIEAIFLGLVAFSVVPMLFGLIQKSRSQRQQSSAPASAQD

Sequences:

>Translated_226_residues
MTDVTVLALGPQWFDPMYLLSGSGPFGAAILPAIFAIIFIESGLFFPFLPGDSLLFTAGLLASQPDGFAPLWQVLLITPI
AAILGDQVGYWIGHRFHPALRNRKDGRFFKQEHLHRSEAFFEKYGSITIILCRFVPFVRTYAPLVAGMSGMRYRTFIVFN
IIGGVLWASGIVYLGSLFGGVEFVRNNIEAIFLGLVAFSVVPMLFGLIQKSRSQRQQSSAPASAQD
>Mature_225_residues
TDVTVLALGPQWFDPMYLLSGSGPFGAAILPAIFAIIFIESGLFFPFLPGDSLLFTAGLLASQPDGFAPLWQVLLITPIA
AILGDQVGYWIGHRFHPALRNRKDGRFFKQEHLHRSEAFFEKYGSITIILCRFVPFVRTYAPLVAGMSGMRYRTFIVFNI
IGGVLWASGIVYLGSLFGGVEFVRNNIEAIFLGLVAFSVVPMLFGLIQKSRSQRQQSSAPASAQD

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=191, Percent_Identity=40.8376963350785, Blast_Score=147, Evalue=8e-37,
Organism=Escherichia coli, GI1789481, Length=148, Percent_Identity=36.4864864864865, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1789384, Length=165, Percent_Identity=32.7272727272727, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1786252, Length=140, Percent_Identity=34.2857142857143, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 24914; Mature: 24782

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDVTVLALGPQWFDPMYLLSGSGPFGAAILPAIFAIIFIESGLFFPFLPGDSLLFTAGL
CCCEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHH
LASQPDGFAPLWQVLLITPIAAILGDQVGYWIGHRFHPALRNRKDGRFFKQEHLHRSEAF
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCHHHHHHHHHHHHH
FEKYGSITIILCRFVPFVRTYAPLVAGMSGMRYRTFIVFNIIGGVLWASGIVYLGSLFGG
HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEFVRNNIEAIFLGLVAFSVVPMLFGLIQKSRSQRQQSSAPASAQD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TDVTVLALGPQWFDPMYLLSGSGPFGAAILPAIFAIIFIESGLFFPFLPGDSLLFTAGL
CCEEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHH
LASQPDGFAPLWQVLLITPIAAILGDQVGYWIGHRFHPALRNRKDGRFFKQEHLHRSEAF
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCHHHHHHHHHHHHH
FEKYGSITIILCRFVPFVRTYAPLVAGMSGMRYRTFIVFNIIGGVLWASGIVYLGSLFGG
HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEFVRNNIEAIFLGLVAFSVVPMLFGLIQKSRSQRQQSSAPASAQD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]