| Definition | Corynebacterium jeikeium K411, complete genome. |
|---|---|
| Accession | NC_007164 |
| Length | 2,462,499 |
Click here to switch to the map view.
The map label for this gene is comEA [H]
Identifier: 68535643
GI number: 68535643
Start: 690665
End: 691549
Strand: Direct
Name: comEA [H]
Synonym: jk0571
Alternate gene names: 68535643
Gene position: 690665-691549 (Clockwise)
Preceding gene: 68535642
Following gene: 68535644
Centisome position: 28.05
GC content: 65.31
Gene sequence:
>885_bases ATGTCCACACGACGCATGAGGCAGAGTTCTGCTGACAAGGTCCGCGCCCGCGCCGAGGCTTTGGCCCAACCCATGCCGGA GCATGAACTCGCCAACGTTGACCTAGACACGCATACCGTCATAAGCAGCACTGCGTCCCGGGGGCTTGTCGTCACAGTGG TCGTGGCAGTTCTCATCAGCGTCGCATTTTTCGCCTGCCAACGGCAGGATTCGGACGACGGGGCAGGCGGCGCCGACATG CTGGCGACCACGAGCGGACCTGGAGCACCTGGCGGCGCCGCTGATACGGGCATGGGCGGCGCCGTTCCGGCAAGCGATAC GGGGCAGGCCACAGCCGGGGATGGTAGTCAGTCTGACGAGCAAGCCGAAAGCCAGGAAGTCGTCGTGAGCGTGCAGGGGA TGGTGCACCATCCGGGGCTGCTCCGGGTGCAGGCCACCACCCGGGTGGGCGAAGCCATAGAGGCCGCAGGCGGAGGTCTT CCCAAGGCAGTTGTATTGGGCATCAATCTGGCAGAGCCGGTCAGTGATGGAATGCAGATCGTTGTCGATGATCGCGGCTC GCGCGTGGTGTACGCCGGGGGTGCGCAATCCGCGCCGGGCGGGACCGCAGGAGCGGGCGCGGGCGGGGCGAACCAGGGTG GTGGGGCAGGCGGTGGTTCTGCGCGTGGGGCGGACGGCGCAAACGGCGCAGACGCCAAGGTGAACCTCAATACCGCTGAC GCCACGCAGTTGGAAACCATAAGTGGCATCGGTCCTGCCACTGCTGAGGCCATCATCGATTGGAGAGAATCCAACGGTCC ATTCACCAGCGTTGAGCAGCTCCTGGACGTCCGCGGCATCGGCCCAGCGAAGTTCGAAGCGATGCGCGATGCCGTCACTA TCTAG
Upstream 100 bases:
>100_bases TATCCACAGGGGAGGGGTTTTCCACAGCTTCCTGGAGTTTTGACGTTCCAGCTGTGGTATCCGGCGGTCAGTAGTCCGCT AGACATGTTCTGATCGGCGC
Downstream 100 bases:
>100_bases CTCCTTTGCGACGGGTCTATGGACGTCCGCGGCACCGCAAGAATCGCCGGAGCCGTTCAGCCCGGAGGCCGTCACCAAAG CTCGTGGCGTCGATCTGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MSTRRMRQSSADKVRARAEALAQPMPEHELANVDLDTHTVISSTASRGLVVTVVVAVLISVAFFACQRQDSDDGAGGADM LATTSGPGAPGGAADTGMGGAVPASDTGQATAGDGSQSDEQAESQEVVVSVQGMVHHPGLLRVQATTRVGEAIEAAGGGL PKAVVLGINLAEPVSDGMQIVVDDRGSRVVYAGGAQSAPGGTAGAGAGGANQGGGAGGGSARGADGANGADAKVNLNTAD ATQLETISGIGPATAEAIIDWRESNGPFTSVEQLLDVRGIGPAKFEAMRDAVTI
Sequences:
>Translated_294_residues MSTRRMRQSSADKVRARAEALAQPMPEHELANVDLDTHTVISSTASRGLVVTVVVAVLISVAFFACQRQDSDDGAGGADM LATTSGPGAPGGAADTGMGGAVPASDTGQATAGDGSQSDEQAESQEVVVSVQGMVHHPGLLRVQATTRVGEAIEAAGGGL PKAVVLGINLAEPVSDGMQIVVDDRGSRVVYAGGAQSAPGGTAGAGAGGANQGGGAGGGSARGADGANGADAKVNLNTAD ATQLETISGIGPATAEAIIDWRESNGPFTSVEQLLDVRGIGPAKFEAMRDAVTI >Mature_293_residues STRRMRQSSADKVRARAEALAQPMPEHELANVDLDTHTVISSTASRGLVVTVVVAVLISVAFFACQRQDSDDGAGGADML ATTSGPGAPGGAADTGMGGAVPASDTGQATAGDGSQSDEQAESQEVVVSVQGMVHHPGLLRVQATTRVGEAIEAAGGGLP KAVVLGINLAEPVSDGMQIVVDDRGSRVVYAGGAQSAPGGTAGAGAGGANQGGGAGGGSARGADGANGADAKVNLNTADA TQLETISGIGPATAEAIIDWRESNGPFTSVEQLLDVRGIGPAKFEAMRDAVTI
Specific function: Needed for both DNA binding and transport. It is absolutely required for the uptake of transforming DNA but not for binding. Its role in binding may be indirect [H]
COG id: COG1555
COG function: function code L; DNA uptake protein and related DNA-binding proteins
Gene ontology:
Cell location: Cell membrane; Single-pass type II membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 HhH domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004787 - InterPro: IPR004509 - InterPro: IPR000445 - InterPro: IPR003583 - InterPro: IPR010994 - InterPro: IPR019554 [H]
Pfam domain/function: PF00633 HHH; PF10531 SLBB [H]
EC number: NA
Molecular weight: Translated: 29054; Mature: 28923
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTRRMRQSSADKVRARAEALAQPMPEHELANVDLDTHTVISSTASRGLVVTVVVAVLIS CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHH VAFFACQRQDSDDGAGGADMLATTSGPGAPGGAADTGMGGAVPASDTGQATAGDGSQSDE HHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH QAESQEVVVSVQGMVHHPGLLRVQATTRVGEAIEAAGGGLPKAVVLGINLAEPVSDGMQI HHHHCEEEEEEECCCCCCCEEEEEEHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEE VVDDRGSRVVYAGGAQSAPGGTAGAGAGGANQGGGAGGGSARGADGANGADAKVNLNTAD EEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC ATQLETISGIGPATAEAIIDWRESNGPFTSVEQLLDVRGIGPAKFEAMRDAVTI CHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure STRRMRQSSADKVRARAEALAQPMPEHELANVDLDTHTVISSTASRGLVVTVVVAVLIS CCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHH VAFFACQRQDSDDGAGGADMLATTSGPGAPGGAADTGMGGAVPASDTGQATAGDGSQSDE HHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH QAESQEVVVSVQGMVHHPGLLRVQATTRVGEAIEAAGGGLPKAVVLGINLAEPVSDGMQI HHHHCEEEEEEECCCCCCCEEEEEEHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEE VVDDRGSRVVYAGGAQSAPGGTAGAGAGGANQGGGAGGGSARGADGANGADAKVNLNTAD EEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC ATQLETISGIGPATAEAIIDWRESNGPFTSVEQLLDVRGIGPAKFEAMRDAVTI CHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7968523; 8969508; 9384377; 7768800 [H]