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The map label for this gene is tnp3511b [H]

Identifier: 68535602

GI number: 68535602

Start: 643143

End: 644360

Strand: Direct

Name: tnp3511b [H]

Synonym: jk0530

Alternate gene names: 68535602

Gene position: 643143-644360 (Clockwise)

Preceding gene: 68535601

Following gene: 68535603

Centisome position: 26.12

GC content: 54.27

Gene sequence:

>1218_bases
ATGGAGAAACCAGCGCCGAAAATCATCATCGAAACCATGCTCGCTACTGGTATGACTCAAGCCGAAGCAGCTCAACATTT
CGGCGTGACAACCCGTTGGATCCGAACACTTCAAAAGCGTTACAACGAAGGCGGCGTGGAGGCACTGACCCCCAAATCAA
AACGCCCTCATACAAATCCACGCGCCACCACCCCTGACACAGTCGACCGCATCCTCCAACTACGCAACGAACTGACCAAC
CGCGGCACCGACGCAGGAGCCCACACCATCCGCTGGCATCTCGAACAAGAAGACACAACCCCACTGCCAGCAACAGCAAC
GATCCACCGCATCCTCAAAAACAACGGACACGTCACACTCCAACCACAAAAGCGTCCCCGCAGCTCATGGATACGATTCC
AAGCAGACCAACCCAACGAAACATGGCAAATGGACTACAGCGACTGGACCATCGCTGGCCACCAACGCGTCGTTATCCTC
ACAATCCTCGACGACCACTCACGCTACGTACTACGCTGCCAAGCGTTTAACAGCGCAACCGTCACCCATGTCATTGAAGC
CTTCGCCTACACAGCCGCTATCCACGGTTACCCACAATCAACCCTGACCGACAACGGACGAGCATTCACAACCAGCAACG
ACCGCACCAACCCAGCACGCAATGGCTTCGAACAACTCCTCCTAGACCTAGGGATTGAACAGAAAAACGGCAGACCCTAT
CACCCACAAACCCAAGGCAAAGTTGAACGCTTCCACTACACGCTCAAACTGGCACTACGCAACAAACCCCAAGCTAGAGA
CATCGACAACCTCAACGAACAACTCGATGACATTATCGACTACTACAACAACAAACGCCCCCACCGAGCGCTCAACCGAT
GTACCCCTGCAGAGGCCTACAACGCTTTACCCAAAGCGCACCCCCGCCCTGGCGCCAAGACTCATGACTACCGCCTACGC
ACCGACAAAGTCGCCAAAAACGGCAAAACAACACTGCGATGGGGCGGACAACTCAGACGCATCTATATCGGACGCCGATG
GACCGGAGAACCCATCACCATCATGTGCGTAGACAACACAGCGGACATCAAAATCACCGCCACGGGGCAACATATAGCCC
ACTACACACTGACACCTGACAAGATCTACTACAACCAAAAAGACAACGAACTCAACCCCAACCCGGGCAACAAGAATAGA
GAAAGCCCCGGGACATAA

Upstream 100 bases:

>100_bases
CATCGTTCCGGTGAAAAACCACATGCCCTGCAACACGCCAAAGTTGCCCCAAACACGCTGAAACTGATGTCTCGCGACAT
CGTTCCTCCATGCTGAACCC

Downstream 100 bases:

>100_bases
CCGGAACGATGTCTCGAGACATCACATGGCGCCCCCGGCAGGACTCGAACCCGCGACACATGGGGTAGAAACCCACTGCT
CTAATCCACTGAGCTACGGA

Product: transposase for IS3511b

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MEKPAPKIIIETMLATGMTQAEAAQHFGVTTRWIRTLQKRYNEGGVEALTPKSKRPHTNPRATTPDTVDRILQLRNELTN
RGTDAGAHTIRWHLEQEDTTPLPATATIHRILKNNGHVTLQPQKRPRSSWIRFQADQPNETWQMDYSDWTIAGHQRVVIL
TILDDHSRYVLRCQAFNSATVTHVIEAFAYTAAIHGYPQSTLTDNGRAFTTSNDRTNPARNGFEQLLLDLGIEQKNGRPY
HPQTQGKVERFHYTLKLALRNKPQARDIDNLNEQLDDIIDYYNNKRPHRALNRCTPAEAYNALPKAHPRPGAKTHDYRLR
TDKVAKNGKTTLRWGGQLRRIYIGRRWTGEPITIMCVDNTADIKITATGQHIAHYTLTPDKIYYNQKDNELNPNPGNKNR
ESPGT

Sequences:

>Translated_405_residues
MEKPAPKIIIETMLATGMTQAEAAQHFGVTTRWIRTLQKRYNEGGVEALTPKSKRPHTNPRATTPDTVDRILQLRNELTN
RGTDAGAHTIRWHLEQEDTTPLPATATIHRILKNNGHVTLQPQKRPRSSWIRFQADQPNETWQMDYSDWTIAGHQRVVIL
TILDDHSRYVLRCQAFNSATVTHVIEAFAYTAAIHGYPQSTLTDNGRAFTTSNDRTNPARNGFEQLLLDLGIEQKNGRPY
HPQTQGKVERFHYTLKLALRNKPQARDIDNLNEQLDDIIDYYNNKRPHRALNRCTPAEAYNALPKAHPRPGAKTHDYRLR
TDKVAKNGKTTLRWGGQLRRIYIGRRWTGEPITIMCVDNTADIKITATGQHIAHYTLTPDKIYYNQKDNELNPNPGNKNR
ESPGT
>Mature_405_residues
MEKPAPKIIIETMLATGMTQAEAAQHFGVTTRWIRTLQKRYNEGGVEALTPKSKRPHTNPRATTPDTVDRILQLRNELTN
RGTDAGAHTIRWHLEQEDTTPLPATATIHRILKNNGHVTLQPQKRPRSSWIRFQADQPNETWQMDYSDWTIAGHQRVVIL
TILDDHSRYVLRCQAFNSATVTHVIEAFAYTAAIHGYPQSTLTDNGRAFTTSNDRTNPARNGFEQLLLDLGIEQKNGRPY
HPQTQGKVERFHYTLKLALRNKPQARDIDNLNEQLDDIIDYYNNKRPHRALNRCTPAEAYNALPKAHPRPGAKTHDYRLR
TDKVAKNGKTTLRWGGQLRRIYIGRRWTGEPITIMCVDNTADIKITATGQHIAHYTLTPDKIYYNQKDNELNPNPGNKNR
ESPGT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1786462, Length=313, Percent_Identity=29.3929712460064, Blast_Score=120, Evalue=2e-28,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 46283; Mature: 46283

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKPAPKIIIETMLATGMTQAEAAQHFGVTTRWIRTLQKRYNEGGVEALTPKSKRPHTNP
CCCCCHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCC
RATTPDTVDRILQLRNELTNRGTDAGAHTIRWHLEQEDTTPLPATATIHRILKNNGHVTL
CCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEE
QPQKRPRSSWIRFQADQPNETWQMDYSDWTIAGHQRVVILTILDDHSRYVLRCQAFNSAT
CCCCCCCCCEEEEECCCCCCCEEECCCCEEEECCCEEEEEEEECCCCEEEEEEECCCCHH
VTHVIEAFAYTAAIHGYPQSTLTDNGRAFTTSNDRTNPARNGFEQLLLDLGIEQKNGRPY
HHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
HPQTQGKVERFHYTLKLALRNKPQARDIDNLNEQLDDIIDYYNNKRPHRALNRCTPAEAY
CCCCCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHH
NALPKAHPRPGAKTHDYRLRTDKVAKNGKTTLRWGGQLRRIYIGRRWTGEPITIMCVDNT
HCCCCCCCCCCCCCCCEEECHHHHHCCCCEEEEECCEEEEEEEECEECCCCEEEEEECCC
ADIKITATGQHIAHYTLTPDKIYYNQKDNELNPNPGNKNRESPGT
CCEEEEECCCEEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEKPAPKIIIETMLATGMTQAEAAQHFGVTTRWIRTLQKRYNEGGVEALTPKSKRPHTNP
CCCCCHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCC
RATTPDTVDRILQLRNELTNRGTDAGAHTIRWHLEQEDTTPLPATATIHRILKNNGHVTL
CCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEE
QPQKRPRSSWIRFQADQPNETWQMDYSDWTIAGHQRVVILTILDDHSRYVLRCQAFNSAT
CCCCCCCCCEEEEECCCCCCCEEECCCCEEEECCCEEEEEEEECCCCEEEEEEECCCCHH
VTHVIEAFAYTAAIHGYPQSTLTDNGRAFTTSNDRTNPARNGFEQLLLDLGIEQKNGRPY
HHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
HPQTQGKVERFHYTLKLALRNKPQARDIDNLNEQLDDIIDYYNNKRPHRALNRCTPAEAY
CCCCCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHH
NALPKAHPRPGAKTHDYRLRTDKVAKNGKTTLRWGGQLRRIYIGRRWTGEPITIMCVDNT
HCCCCCCCCCCCCCCCEEECHHHHHCCCCEEEEECCEEEEEEEECEECCCCEEEEEECCC
ADIKITATGQHIAHYTLTPDKIYYNQKDNELNPNPGNKNRESPGT
CCEEEEECCCEEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503; 8113168 [H]