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The map label for this gene is nrdF [H]

Identifier: 68535550

GI number: 68535550

Start: 584170

End: 585165

Strand: Direct

Name: nrdF [H]

Synonym: jk0480

Alternate gene names: 68535550

Gene position: 584170-585165 (Clockwise)

Preceding gene: 68535548

Following gene: 68535551

Centisome position: 23.72

GC content: 56.53

Gene sequence:

>996_bases
ATGAGTGCGCACGCACCCCACACTCCCGTACACCGCGTCGACGGCGATCCGGTAGCCGCCATCAACTGGAATAGCATTCC
GGACGAAAAGGACCTGGAGGTGTGGGACCGCCTCACTGCCAACTTCTGGCTGCCTGAGAAGGTGCCACTGTCCAACGACG
TCCCCAGCTGGTCCACACTAAATGACATGGAGAAGCAGGCCACCATGCGTGTGTTCACCGGCCTGACCATGCTGGATACG
ATTCAGGGCACAGTTGGTGCAGTAAAGCTGATCGAGGATGCTGCCACTCCGCATGAGGAAGCCGTCTTTACGAATATCTC
CTTTATGGAGAGCGTTCACGCGAAGTCTTATTCCTCTATCTTTATGACGCTGGCCTCCACGCCGGAGATCAACGATGCTT
TCCGTTGGTCCGAAGAGAACGAGAAGCTGCAAAACAAGGCGAAGATCATCCTCGACTTCTACGAGGGCGACGATCCGATG
AAGAAGAAGATTGCCTCTGTGCTGCTGGAGAGCTTCCTCTTCTACTCCGGTTTCTACCTGCCGATGTACTGGTCTTCGCA
TGCGAAGCTGACCAACACCGCAGACATTATCCGCCTGATCATCCGCGATGAGTCTGTGCACGGTTACTACATTGGCTACA
AGTACCAGCGCGCACTGGAAAACGAGACTCCGGAGCGCCAGGAGGAGCTGAAGGAGCACACCTTCGACCTGCTGCTGGAA
CTGTACGACAACGAAGCACAGTACACCGAGGACCTGTACGACGAGCTCGGCTGGACCGAGGACGTGAAGCGCTTCCTGCG
CTACAACGCCAACAAGGCGCTGAACAACCTGGGATATGAGGGACTGTTCCCGGCTGACGAGACTCGCGTCTCCCCGGCGA
TCCTGTCCGCTTTGAACCCGGGTGGCGACGAGAACCACGACTTCTTCTCCGGCTCTGGTTCTTCCTACGTAATTGGTAAG
GCGGAAAACACCGTCGACGACGACTGGGACTTCTAA

Upstream 100 bases:

>100_bases
GCTAGGTACGTCGTAGAAACGGGGTACGATGGGGCGAAGTGCACAAGCTGAGGGTCAGCGAGAAATCAGCACGTTTTGTG
AAGAAGGAGACACGCAAGCG

Downstream 100 bases:

>100_bases
TTAGCACCCCCGAAAACGTGGGATCTGTTAGCTGCGCGCCGTCCACGGCTATTGAAATGCGCGTTAACGGGATACTATGT
AAGCATTCTGCGTCTGTTCG

Product: ribonucleotide-diphosphate reductase subunit beta

Products: NA

Alternate protein names: Ribonucleotide reductase small subunit [H]

Number of amino acids: Translated: 331; Mature: 330

Protein sequence:

>331_residues
MSAHAPHTPVHRVDGDPVAAINWNSIPDEKDLEVWDRLTANFWLPEKVPLSNDVPSWSTLNDMEKQATMRVFTGLTMLDT
IQGTVGAVKLIEDAATPHEEAVFTNISFMESVHAKSYSSIFMTLASTPEINDAFRWSEENEKLQNKAKIILDFYEGDDPM
KKKIASVLLESFLFYSGFYLPMYWSSHAKLTNTADIIRLIIRDESVHGYYIGYKYQRALENETPERQEELKEHTFDLLLE
LYDNEAQYTEDLYDELGWTEDVKRFLRYNANKALNNLGYEGLFPADETRVSPAILSALNPGGDENHDFFSGSGSSYVIGK
AENTVDDDWDF

Sequences:

>Translated_331_residues
MSAHAPHTPVHRVDGDPVAAINWNSIPDEKDLEVWDRLTANFWLPEKVPLSNDVPSWSTLNDMEKQATMRVFTGLTMLDT
IQGTVGAVKLIEDAATPHEEAVFTNISFMESVHAKSYSSIFMTLASTPEINDAFRWSEENEKLQNKAKIILDFYEGDDPM
KKKIASVLLESFLFYSGFYLPMYWSSHAKLTNTADIIRLIIRDESVHGYYIGYKYQRALENETPERQEELKEHTFDLLLE
LYDNEAQYTEDLYDELGWTEDVKRFLRYNANKALNNLGYEGLFPADETRVSPAILSALNPGGDENHDFFSGSGSSYVIGK
AENTVDDDWDF
>Mature_330_residues
SAHAPHTPVHRVDGDPVAAINWNSIPDEKDLEVWDRLTANFWLPEKVPLSNDVPSWSTLNDMEKQATMRVFTGLTMLDTI
QGTVGAVKLIEDAATPHEEAVFTNISFMESVHAKSYSSIFMTLASTPEINDAFRWSEENEKLQNKAKIILDFYEGDDPMK
KKIASVLLESFLFYSGFYLPMYWSSHAKLTNTADIIRLIIRDESVHGYYIGYKYQRALENETPERQEELKEHTFDLLLEL
YDNEAQYTEDLYDELGWTEDVKRFLRYNANKALNNLGYEGLFPADETRVSPAILSALNPGGDENHDFFSGSGSSYVIGKA
ENTVDDDWDF

Specific function: Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides [H]

COG id: COG0208

COG function: function code F; Ribonucleotide reductase, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribonucleoside diphosphate reductase small chain family [H]

Homologues:

Organism=Escherichia coli, GI1789031, Length=314, Percent_Identity=69.7452229299363, Blast_Score=462, Evalue=1e-131,
Organism=Escherichia coli, GI1788567, Length=360, Percent_Identity=24.1666666666667, Blast_Score=83, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009078
- InterPro:   IPR012348
- InterPro:   IPR000358 [H]

Pfam domain/function: PF00268 Ribonuc_red_sm [H]

EC number: =1.17.4.1 [H]

Molecular weight: Translated: 37784; Mature: 37653

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: PS00368 RIBORED_SMALL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAHAPHTPVHRVDGDPVAAINWNSIPDEKDLEVWDRLTANFWLPEKVPLSNDVPSWSTL
CCCCCCCCCCEECCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH
NDMEKQATMRVFTGLTMLDTIQGTVGAVKLIEDAATPHEEAVFTNISFMESVHAKSYSSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
FMTLASTPEINDAFRWSEENEKLQNKAKIILDFYEGDDPMKKKIASVLLESFLFYSGFYL
HHHHCCCCCCCHHHCCCCHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCE
PMYWSSHAKLTNTADIIRLIIRDESVHGYYIGYKYQRALENETPERQEELKEHTFDLLLE
EEEECCCCCCCHHHHHHHHHHCCCCCCEEEECHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LYDNEAQYTEDLYDELGWTEDVKRFLRYNANKALNNLGYEGLFPADETRVSPAILSALNP
HHCCHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHCCCCCCCCCCHHHCCHHHHHHCCC
GGDENHDFFSGSGSSYVIGKAENTVDDDWDF
CCCCCCCCCCCCCCEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
SAHAPHTPVHRVDGDPVAAINWNSIPDEKDLEVWDRLTANFWLPEKVPLSNDVPSWSTL
CCCCCCCCCEECCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH
NDMEKQATMRVFTGLTMLDTIQGTVGAVKLIEDAATPHEEAVFTNISFMESVHAKSYSSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
FMTLASTPEINDAFRWSEENEKLQNKAKIILDFYEGDDPMKKKIASVLLESFLFYSGFYL
HHHHCCCCCCCHHHCCCCHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCE
PMYWSSHAKLTNTADIIRLIIRDESVHGYYIGYKYQRALENETPERQEELKEHTFDLLLE
EEEECCCCCCCHHHHHHHHHHCCCCCCEEEECHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LYDNEAQYTEDLYDELGWTEDVKRFLRYNANKALNNLGYEGLFPADETRVSPAILSALNP
HHCCHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHCCCCCCCCCCHHHCCHHHHHHCCC
GGDENHDFFSGSGSSYVIGKAENTVDDDWDF
CCCCCCCCCCCCCCEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]