BacMap

Definition	Corynebacterium jeikeium K411, complete genome.
Accession	NC_007164
Length	2,462,499

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The map label for this gene is gabD [H]

Identifier: 68535520

GI number: 68535520

Start: 543001

End: 544524

Strand: Direct

Name: gabD [H]

Synonym: jk0450

Alternate gene names: 68535520

Gene position: 543001-544524 (Clockwise)

Preceding gene: 68535518

Following gene: 68535523

Centisome position: 22.05

GC content: 63.58

Gene sequence:

>1524_bases
ATGACTTCACTCAACATTCCTTCTGAATTCAGCACCACTCTTCAGGCCGCGGGGCTTTCCTTCGAGGTGCCCACGGGGTT
GTTCTTAGGTGGGGCCTGGCGCTCTGGGTCTGCAGGTGAAACTATTTCGGTTATTGACGCCGCCACGGGGAAGCCTTTCG
CGGATGTCGCCGCGGCAACAGAGGATGATGCGCGGGAGGCCATGGATAAGGCCGTGGAGGTTCAGGCGGACTGGGCCGAA
TCCACCCCGCGGGAGCGTTCCGAGCTTCTGCGTCGGCTGTTTGATTTGGTGCACGAGCATGCGGATCAGCTGGCTGCTTT
GCAGTCCCTGGAGCTGGGGCGCGCGCTGCCTGATTCCAAGGGCGAGGTGACCTACGCTGCCGAGTATCTGCGCTGGTTCA
GCGAGCGGGCGGCGGCTATTTCTGGCGAGTATCGCGTGGCTCCGGCGGGTAACGGGCGCATCGTGACCACGCACCGTCCG
GTGGGACCGGTGCTGGCGATCACCCCGTGGAACTTCCCACTGGCGATGGTTACCCGCAAGCTGGCGCCAGCGCTGGCGGC
GGGCTGCACCGTGATTGCCAAGCCGGCGCAGCTAACTCCGCTGACGATGCTTTACTTCGCGGAGCTGGGGCGCATCGCGG
GCATTCCTGATGGTGTGTTCCAAGTGCTGCCGACATCTTCGGCGCGCCGCGTTTCCGCCCTGTTGGATGATGATCGCCTG
CGCAAGCTGACTTTTACCGGTTCTACGGAGGTGGGTCAGGCCCTGGCCGCCACCGCGGCGCAGAAGACGATCCGCACTTC
GCTGGAACTCGGCGGTAACGCACCTTTCGTCGTGTTGGAGCACGCGGATGTGGACAAGGCTGTGGAGCAGGCCATCGCGG
CGAAGATGCGCGGCGCGGGTCAGGTTTGCGTGGCCGCGAACCGCTTCATCGTTCACGAATCCCTGGCTGAGGAGTTCGAG
GCTGGGTTGGTGCAGAAAATGAGTGAGTTCGTGATGGGGCCAGGCACCGACCCGAAGACGACTATGGGGCCGCTGGTCAG
TCAGGAGCAGCGCGATGGCGTGCGCGACATGGTGGCCAAGGCCGTCGAGGAGGGAGCCCACGTCGCGCTCGGCGGAAACG
AGGCCCTGGACAAGCTGGGGGAGACGCACCCTGACCTGGATCCGAATGGTTTCTGGTATCCCGCAACGGTGCTTACGGGC
GTGACGCCACAGTTTGAGATCGCTAACCAGGAGATCTTCGGTCCCGTCGCGGCCGTGCAGCGCGTCTCCAGCGATGAAGA
AGCTTTGAAGGTCGCCAACGATACAGTCTTCGGCTTGGCTGGCTATGTGATGGGCGAGGACATGAAGAAGACCCTGCGCT
TCGCCGAGCGGATGGAGGCCGGCATGGTCGGTGTGAACCGTGGCGCGCTATCGGATGCGTCTGCCCCCTTCGGTGGCGTA
AAGCAGTCGGGTCTGGGGCGCGAGGGTGGATTCGAGGGGATCGAGGAGTACCTCGACACCGTATACCTGGCGCTCGACGT
TTAA

Upstream 100 bases:

>100_bases
CCTTTCGTCGCTGCAATTATCACTTTCCACGGTAGTGGAAAAGGTGCAGGCGCGTGGCGGTCTGCAAGCCTGCCTCCGAA
AGGCGCGTATATGTGGGTGT

Downstream 100 bases:

>100_bases
GCCAGCTCTAGGTCGGCGCGCTAGTCGAGGGCGCTAGTCGAGGGCGCTGAGCGTGGCCTCGTGTAGCAGGCCGTTGGTGG
CGACGGCGGACCCGCCGTGC

Product: putative NAD-dependent aldehyde dehydrogenase

Products: NA

Alternate protein names: SSDH [H]

Number of amino acids: Translated: 507; Mature: 506

Protein sequence:

>507_residues
MTSLNIPSEFSTTLQAAGLSFEVPTGLFLGGAWRSGSAGETISVIDAATGKPFADVAAATEDDAREAMDKAVEVQADWAE
STPRERSELLRRLFDLVHEHADQLAALQSLELGRALPDSKGEVTYAAEYLRWFSERAAAISGEYRVAPAGNGRIVTTHRP
VGPVLAITPWNFPLAMVTRKLAPALAAGCTVIAKPAQLTPLTMLYFAELGRIAGIPDGVFQVLPTSSARRVSALLDDDRL
RKLTFTGSTEVGQALAATAAQKTIRTSLELGGNAPFVVLEHADVDKAVEQAIAAKMRGAGQVCVAANRFIVHESLAEEFE
AGLVQKMSEFVMGPGTDPKTTMGPLVSQEQRDGVRDMVAKAVEEGAHVALGGNEALDKLGETHPDLDPNGFWYPATVLTG
VTPQFEIANQEIFGPVAAVQRVSSDEEALKVANDTVFGLAGYVMGEDMKKTLRFAERMEAGMVGVNRGALSDASAPFGGV
KQSGLGREGGFEGIEEYLDTVYLALDV

Sequences:

>Translated_507_residues
MTSLNIPSEFSTTLQAAGLSFEVPTGLFLGGAWRSGSAGETISVIDAATGKPFADVAAATEDDAREAMDKAVEVQADWAE
STPRERSELLRRLFDLVHEHADQLAALQSLELGRALPDSKGEVTYAAEYLRWFSERAAAISGEYRVAPAGNGRIVTTHRP
VGPVLAITPWNFPLAMVTRKLAPALAAGCTVIAKPAQLTPLTMLYFAELGRIAGIPDGVFQVLPTSSARRVSALLDDDRL
RKLTFTGSTEVGQALAATAAQKTIRTSLELGGNAPFVVLEHADVDKAVEQAIAAKMRGAGQVCVAANRFIVHESLAEEFE
AGLVQKMSEFVMGPGTDPKTTMGPLVSQEQRDGVRDMVAKAVEEGAHVALGGNEALDKLGETHPDLDPNGFWYPATVLTG
VTPQFEIANQEIFGPVAAVQRVSSDEEALKVANDTVFGLAGYVMGEDMKKTLRFAERMEAGMVGVNRGALSDASAPFGGV
KQSGLGREGGFEGIEEYLDTVYLALDV
>Mature_506_residues
TSLNIPSEFSTTLQAAGLSFEVPTGLFLGGAWRSGSAGETISVIDAATGKPFADVAAATEDDAREAMDKAVEVQADWAES
TPRERSELLRRLFDLVHEHADQLAALQSLELGRALPDSKGEVTYAAEYLRWFSERAAAISGEYRVAPAGNGRIVTTHRPV
GPVLAITPWNFPLAMVTRKLAPALAAGCTVIAKPAQLTPLTMLYFAELGRIAGIPDGVFQVLPTSSARRVSALLDDDRLR
KLTFTGSTEVGQALAATAAQKTIRTSLELGGNAPFVVLEHADVDKAVEQAIAAKMRGAGQVCVAANRFIVHESLAEEFEA
GLVQKMSEFVMGPGTDPKTTMGPLVSQEQRDGVRDMVAKAVEEGAHVALGGNEALDKLGETHPDLDPNGFWYPATVLTGV
TPQFEIANQEIFGPVAAVQRVSSDEEALKVANDTVFGLAGYVMGEDMKKTLRFAERMEAGMVGVNRGALSDASAPFGGVK
QSGLGREGGFEGIEEYLDTVYLALDV

Specific function: Catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate [H]

COG id: COG1012

COG function: function code C; NAD-dependent aldehyde dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldehyde dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4507229, Length=484, Percent_Identity=41.7355371900826, Blast_Score=332, Evalue=4e-91,
Organism=Homo sapiens, GI25777721, Length=497, Percent_Identity=40.4426559356137, Blast_Score=322, Evalue=4e-88,
Organism=Homo sapiens, GI21361176, Length=481, Percent_Identity=34.0956340956341, Blast_Score=278, Evalue=1e-74,
Organism=Homo sapiens, GI25777724, Length=482, Percent_Identity=35.0622406639004, Blast_Score=270, Evalue=2e-72,
Organism=Homo sapiens, GI153266822, Length=492, Percent_Identity=34.9593495934959, Blast_Score=263, Evalue=3e-70,
Organism=Homo sapiens, GI21614513, Length=490, Percent_Identity=34.6938775510204, Blast_Score=261, Evalue=2e-69,
Organism=Homo sapiens, GI25777730, Length=495, Percent_Identity=34.7474747474747, Blast_Score=258, Evalue=9e-69,
Organism=Homo sapiens, GI238814322, Length=496, Percent_Identity=32.8629032258064, Blast_Score=256, Evalue=3e-68,
Organism=Homo sapiens, GI25777728, Length=419, Percent_Identity=36.7541766109785, Blast_Score=250, Evalue=2e-66,
Organism=Homo sapiens, GI25777732, Length=486, Percent_Identity=33.1275720164609, Blast_Score=249, Evalue=3e-66,
Organism=Homo sapiens, GI12007648, Length=449, Percent_Identity=30.7349665924276, Blast_Score=244, Evalue=2e-64,
Organism=Homo sapiens, GI115387104, Length=470, Percent_Identity=30, Blast_Score=231, Evalue=1e-60,
Organism=Homo sapiens, GI25777726, Length=482, Percent_Identity=32.1576763485477, Blast_Score=231, Evalue=1e-60,
Organism=Homo sapiens, GI25952152, Length=449, Percent_Identity=28.7305122494432, Blast_Score=191, Evalue=2e-48,
Organism=Homo sapiens, GI188035924, Length=508, Percent_Identity=29.1338582677165, Blast_Score=182, Evalue=9e-46,
Organism=Homo sapiens, GI310128103, Length=508, Percent_Identity=29.1338582677165, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI310128093, Length=507, Percent_Identity=28.9940828402367, Blast_Score=179, Evalue=5e-45,
Organism=Homo sapiens, GI11095441, Length=447, Percent_Identity=25.0559284116331, Blast_Score=158, Evalue=1e-38,
Organism=Homo sapiens, GI310128091, Length=507, Percent_Identity=27.810650887574, Blast_Score=155, Evalue=1e-37,
Organism=Homo sapiens, GI301500698, Length=257, Percent_Identity=31.1284046692607, Blast_Score=152, Evalue=6e-37,
Organism=Homo sapiens, GI223972651, Length=479, Percent_Identity=28.8100208768267, Blast_Score=144, Evalue=2e-34,
Organism=Homo sapiens, GI206597441, Length=420, Percent_Identity=26.9047619047619, Blast_Score=125, Evalue=1e-28,
Organism=Homo sapiens, GI206597439, Length=420, Percent_Identity=26.9047619047619, Blast_Score=125, Evalue=1e-28,
Organism=Homo sapiens, GI22907049, Length=420, Percent_Identity=26.9047619047619, Blast_Score=125, Evalue=1e-28,
Organism=Homo sapiens, GI310128089, Length=272, Percent_Identity=30.1470588235294, Blast_Score=124, Evalue=3e-28,
Organism=Homo sapiens, GI73695881, Length=335, Percent_Identity=29.8507462686567, Blast_Score=122, Evalue=6e-28,
Organism=Homo sapiens, GI73695879, Length=335, Percent_Identity=29.8507462686567, Blast_Score=122, Evalue=6e-28,
Organism=Homo sapiens, GI4502043, Length=380, Percent_Identity=28.1578947368421, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI238814371, Length=380, Percent_Identity=28.1578947368421, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI310128097, Length=269, Percent_Identity=30.1115241635688, Blast_Score=119, Evalue=5e-27,
Organism=Homo sapiens, GI4557303, Length=334, Percent_Identity=26.9461077844311, Blast_Score=119, Evalue=6e-27,
Organism=Homo sapiens, GI73466520, Length=341, Percent_Identity=26.3929618768328, Blast_Score=119, Evalue=7e-27,
Organism=Homo sapiens, GI310128087, Length=316, Percent_Identity=30.0632911392405, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI71773324, Length=338, Percent_Identity=28.698224852071, Blast_Score=117, Evalue=3e-26,
Organism=Homo sapiens, GI310128095, Length=271, Percent_Identity=28.7822878228782, Blast_Score=107, Evalue=4e-23,
Organism=Homo sapiens, GI223972653, Length=477, Percent_Identity=25.1572327044025, Blast_Score=101, Evalue=2e-21,
Organism=Homo sapiens, GI238859541, Length=467, Percent_Identity=24.6252676659529, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI25777736, Length=467, Percent_Identity=24.6252676659529, Blast_Score=93, Evalue=5e-19,
Organism=Homo sapiens, GI25777734, Length=467, Percent_Identity=24.6252676659529, Blast_Score=93, Evalue=5e-19,
Organism=Homo sapiens, GI310128099, Length=267, Percent_Identity=28.4644194756554, Blast_Score=86, Evalue=1e-16,
Organism=Homo sapiens, GI310128101, Length=267, Percent_Identity=28.4644194756554, Blast_Score=85, Evalue=1e-16,
Organism=Escherichia coli, GI1789015, Length=478, Percent_Identity=41.2133891213389, Blast_Score=382, Evalue=1e-107,
Organism=Escherichia coli, GI87081896, Length=483, Percent_Identity=36.0248447204969, Blast_Score=286, Evalue=2e-78,
Organism=Escherichia coli, GI1786504, Length=474, Percent_Identity=36.2869198312236, Blast_Score=275, Evalue=7e-75,
Organism=Escherichia coli, GI1787558, Length=500, Percent_Identity=34.2, Blast_Score=273, Evalue=2e-74,
Organism=Escherichia coli, GI87081926, Length=457, Percent_Identity=34.1356673960613, Blast_Score=246, Evalue=2e-66,
Organism=Escherichia coli, GI1787684, Length=488, Percent_Identity=30.1229508196721, Blast_Score=238, Evalue=1e-63,
Organism=Escherichia coli, GI87082295, Length=486, Percent_Identity=33.5390946502058, Blast_Score=230, Evalue=1e-61,
Organism=Escherichia coli, GI1787715, Length=477, Percent_Identity=32.0754716981132, Blast_Score=216, Evalue=3e-57,
Organism=Escherichia coli, GI1787250, Length=470, Percent_Identity=29.5744680851064, Blast_Score=157, Evalue=2e-39,
Organism=Escherichia coli, GI1788042, Length=475, Percent_Identity=28, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI1787653, Length=459, Percent_Identity=25.4901960784314, Blast_Score=84, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17534119, Length=477, Percent_Identity=38.3647798742138, Blast_Score=325, Evalue=3e-89,
Organism=Caenorhabditis elegans, GI133930964, Length=505, Percent_Identity=36.6336633663366, Blast_Score=299, Evalue=2e-81,
Organism=Caenorhabditis elegans, GI25143876, Length=481, Percent_Identity=34.5114345114345, Blast_Score=282, Evalue=2e-76,
Organism=Caenorhabditis elegans, GI25143874, Length=481, Percent_Identity=34.5114345114345, Blast_Score=282, Evalue=3e-76,
Organism=Caenorhabditis elegans, GI17562198, Length=489, Percent_Identity=34.9693251533742, Blast_Score=269, Evalue=2e-72,
Organism=Caenorhabditis elegans, GI25144435, Length=500, Percent_Identity=35.2, Blast_Score=267, Evalue=8e-72,
Organism=Caenorhabditis elegans, GI32564736, Length=428, Percent_Identity=36.214953271028, Blast_Score=243, Evalue=1e-64,
Organism=Caenorhabditis elegans, GI71995606, Length=499, Percent_Identity=29.8597194388778, Blast_Score=223, Evalue=1e-58,
Organism=Caenorhabditis elegans, GI17551164, Length=516, Percent_Identity=28.6821705426357, Blast_Score=217, Evalue=1e-56,
Organism=Caenorhabditis elegans, GI71995613, Length=436, Percent_Identity=29.8165137614679, Blast_Score=189, Evalue=3e-48,
Organism=Caenorhabditis elegans, GI115534176, Length=495, Percent_Identity=27.0707070707071, Blast_Score=169, Evalue=3e-42,
Organism=Caenorhabditis elegans, GI71986308, Length=465, Percent_Identity=27.0967741935484, Blast_Score=164, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI17564084, Length=419, Percent_Identity=27.9236276849642, Blast_Score=134, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI25146394, Length=340, Percent_Identity=28.5294117647059, Blast_Score=128, Evalue=8e-30,
Organism=Caenorhabditis elegans, GI32566756, Length=340, Percent_Identity=28.5294117647059, Blast_Score=128, Evalue=8e-30,
Organism=Caenorhabditis elegans, GI25146391, Length=340, Percent_Identity=28.5294117647059, Blast_Score=128, Evalue=8e-30,
Organism=Caenorhabditis elegans, GI17534447, Length=473, Percent_Identity=24.5243128964059, Blast_Score=88, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI32564151, Length=431, Percent_Identity=24.5939675174014, Blast_Score=83, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI115532534, Length=347, Percent_Identity=24.4956772334294, Blast_Score=74, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6319478, Length=472, Percent_Identity=40.8898305084746, Blast_Score=362, Evalue=1e-101,
Organism=Saccharomyces cerevisiae, GI6325196, Length=486, Percent_Identity=34.9794238683128, Blast_Score=287, Evalue=2e-78,
Organism=Saccharomyces cerevisiae, GI6323822, Length=501, Percent_Identity=34.9301397205589, Blast_Score=281, Evalue=2e-76,
Organism=Saccharomyces cerevisiae, GI6323821, Length=498, Percent_Identity=34.3373493975904, Blast_Score=280, Evalue=3e-76,
Organism=Saccharomyces cerevisiae, GI6320917, Length=497, Percent_Identity=34.0040241448692, Blast_Score=270, Evalue=4e-73,
Organism=Saccharomyces cerevisiae, GI6324950, Length=485, Percent_Identity=32.7835051546392, Blast_Score=254, Evalue=2e-68,
Organism=Saccharomyces cerevisiae, GI6321828, Length=472, Percent_Identity=27.5423728813559, Blast_Score=171, Evalue=4e-43,
Organism=Saccharomyces cerevisiae, GI6321826, Length=469, Percent_Identity=26.0127931769723, Blast_Score=107, Evalue=4e-24,
Organism=Saccharomyces cerevisiae, GI6323757, Length=444, Percent_Identity=25.4504504504505, Blast_Score=97, Evalue=8e-21,
Organism=Drosophila melanogaster, GI281362580, Length=492, Percent_Identity=40.650406504065, Blast_Score=375, Evalue=1e-104,
Organism=Drosophila melanogaster, GI62472918, Length=492, Percent_Identity=40.650406504065, Blast_Score=375, Evalue=1e-104,
Organism=Drosophila melanogaster, GI62472926, Length=492, Percent_Identity=40.650406504065, Blast_Score=375, Evalue=1e-104,
Organism=Drosophila melanogaster, GI62472936, Length=492, Percent_Identity=40.650406504065, Blast_Score=375, Evalue=1e-104,
Organism=Drosophila melanogaster, GI21356737, Length=492, Percent_Identity=40.650406504065, Blast_Score=375, Evalue=1e-104,
Organism=Drosophila melanogaster, GI24585660, Length=496, Percent_Identity=35.2822580645161, Blast_Score=286, Evalue=3e-77,
Organism=Drosophila melanogaster, GI24650465, Length=491, Percent_Identity=34.826883910387, Blast_Score=263, Evalue=3e-70,
Organism=Drosophila melanogaster, GI20129399, Length=481, Percent_Identity=33.6798336798337, Blast_Score=247, Evalue=1e-65,
Organism=Drosophila melanogaster, GI24666674, Length=504, Percent_Identity=26.7857142857143, Blast_Score=179, Evalue=6e-45,
Organism=Drosophila melanogaster, GI24638878, Length=443, Percent_Identity=25.7336343115124, Blast_Score=147, Evalue=1e-35,
Organism=Drosophila melanogaster, GI24638876, Length=443, Percent_Identity=25.7336343115124, Blast_Score=147, Evalue=2e-35,
Organism=Drosophila melanogaster, GI45552499, Length=340, Percent_Identity=26.1764705882353, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI281360299, Length=340, Percent_Identity=26.1764705882353, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI281360297, Length=340, Percent_Identity=26.1764705882353, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI281360295, Length=340, Percent_Identity=26.1764705882353, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24586250, Length=340, Percent_Identity=26.1764705882353, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI281360303, Length=340, Percent_Identity=26.1764705882353, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI281360301, Length=340, Percent_Identity=26.1764705882353, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24668425, Length=444, Percent_Identity=24.3243243243243, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24668417, Length=444, Percent_Identity=24.3243243243243, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24668413, Length=444, Percent_Identity=24.3243243243243, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI281360293, Length=156, Percent_Identity=29.4871794871795, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI28571806, Length=463, Percent_Identity=24.4060475161987, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI28571802, Length=463, Percent_Identity=24.4060475161987, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI28571800, Length=463, Percent_Identity=24.4060475161987, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI28571798, Length=457, Percent_Identity=24.507658643326, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI28571796, Length=457, Percent_Identity=24.507658643326, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI28571794, Length=457, Percent_Identity=24.507658643326, Blast_Score=68, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016161
- InterPro:   IPR016163
- InterPro:   IPR016160
- InterPro:   IPR016162
- InterPro:   IPR015590
- InterPro:   IPR010102 [H]

Pfam domain/function: PF00171 Aldedh [H]

EC number: =1.2.1.79 [H]

Molecular weight: Translated: 53866; Mature: 53734

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLNIPSEFSTTLQAAGLSFEVPTGLFLGGAWRSGSAGETISVIDAATGKPFADVAAAT
CCCCCCCHHHHHHHHHCCCEEECCCCEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHCC
EDDAREAMDKAVEVQADWAESTPRERSELLRRLFDLVHEHADQLAALQSLELGRALPDSK
CHHHHHHHHHHHEEECCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GEVTYAAEYLRWFSERAAAISGEYRVAPAGNGRIVTTHRPVGPVLAITPWNFPLAMVTRK
CCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCEEEECCCCCHHHHHHHH
LAPALAAGCTVIAKPAQLTPLTMLYFAELGRIAGIPDGVFQVLPTSSARRVSALLDDDRL
HHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHCCCHH
RKLTFTGSTEVGQALAATAAQKTIRTSLELGGNAPFVVLEHADVDKAVEQAIAAKMRGAG
EEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCCC
QVCVAANRFIVHESLAEEFEAGLVQKMSEFVMGPGTDPKTTMGPLVSQEQRDGVRDMVAK
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHCCHHHHHHH
AVEEGAHVALGGNEALDKLGETHPDLDPNGFWYPATVLTGVTPQFEIANQEIFGPVAAVQ
HHHCCCEEEECCHHHHHHHCCCCCCCCCCCEEEHHHHHHCCCCCCEECCHHHHHHHHHHH
RVSSDEEALKVANDTVFGLAGYVMGEDMKKTLRFAERMEAGMVGVNRGALSDASAPFGGV
HHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
KQSGLGREGGFEGIEEYLDTVYLALDV
HHCCCCCCCCHHHHHHHHHHHHHEECC
>Mature Secondary Structure 
TSLNIPSEFSTTLQAAGLSFEVPTGLFLGGAWRSGSAGETISVIDAATGKPFADVAAAT
CCCCCCHHHHHHHHHCCCEEECCCCEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHCC
EDDAREAMDKAVEVQADWAESTPRERSELLRRLFDLVHEHADQLAALQSLELGRALPDSK
CHHHHHHHHHHHEEECCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GEVTYAAEYLRWFSERAAAISGEYRVAPAGNGRIVTTHRPVGPVLAITPWNFPLAMVTRK
CCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCEEEECCCCCHHHHHHHH
LAPALAAGCTVIAKPAQLTPLTMLYFAELGRIAGIPDGVFQVLPTSSARRVSALLDDDRL
HHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHCCCHH
RKLTFTGSTEVGQALAATAAQKTIRTSLELGGNAPFVVLEHADVDKAVEQAIAAKMRGAG
EEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCCC
QVCVAANRFIVHESLAEEFEAGLVQKMSEFVMGPGTDPKTTMGPLVSQEQRDGVRDMVAK
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHCCHHHHHHH
AVEEGAHVALGGNEALDKLGETHPDLDPNGFWYPATVLTGVTPQFEIANQEIFGPVAAVQ
HHHCCCEEEECCHHHHHHHCCCCCCCCCCCEEEHHHHHHCCCCCCEECCHHHHHHHHHHH
RVSSDEEALKVANDTVFGLAGYVMGEDMKKTLRFAERMEAGMVGVNRGALSDASAPFGGV
HHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
KQSGLGREGGFEGIEEYLDTVYLALDV
HHCCCCCCCCHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8297211; 9205837; 9278503 [H]