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The map label for this gene is panD

Identifier: 68535357

GI number: 68535357

Start: 355500

End: 355916

Strand: Direct

Name: panD

Synonym: jk0292

Alternate gene names: 68535357

Gene position: 355500-355916 (Clockwise)

Preceding gene: 68535356

Following gene: 68535359

Centisome position: 14.44

GC content: 63.07

Gene sequence:

>417_bases
GTGTTGCGAACAATGCTGAAATCAAAGATCCACCGTGCGACGGTCACGCAGGCCGACTTGCACTACGTCGGCTCGTGCAC
CATCGACGCTGATCTGATGGAAGCTGCCGACATCCTCGAGGGCGAGCAGATCGATATCGTCGATATCGATAACGGCAATC
GCCTGACGACCTACGCCATCACCGGCGACCGGGGTACCGGCGTGATCGGCATCAACGGTGCCGCCGCGCGCCTGATCAGC
CCCGGCGACCTCGTCATCATCATCGGCTATGCCCAGTACAGCGAGGAAGACCTGAAGAACTACGCCTCGCGCGTGGTCTT
CGTGGACGGAAACAACAAGCAGGTGGAGCTCGGCGGCGACCCGGCCCAGGTGCCGGACGGCTCGGGGCTAAAGAACCCGC
GCCACCCGGAGGCCTAG

Upstream 100 bases:

>100_bases
GCTCGCGCGCCGCTCGCGCGTTGCCCGGGCGCCATATTGGCGCCGAGCAAAGTAACAGCTAAATAGCTTATTTGGTTAGC
CCCGAGTAAGGTGTTCACCC

Downstream 100 bases:

>100_bases
CTGATCTCGTAGTTCCCGTCGTCGTTGCGCTCTACGTGGATGCGCCATAGCGGGATTCCTTCTTTCTTTAGAGCTTCTTT
AGTCGCCGAGAGAGTCTTCA

Product: aspartate alpha-decarboxylase

Products: NA

Alternate protein names: Aspartate alpha-decarboxylase

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MLRTMLKSKIHRATVTQADLHYVGSCTIDADLMEAADILEGEQIDIVDIDNGNRLTTYAITGDRGTGVIGINGAAARLIS
PGDLVIIIGYAQYSEEDLKNYASRVVFVDGNNKQVELGGDPAQVPDGSGLKNPRHPEA

Sequences:

>Translated_138_residues
MLRTMLKSKIHRATVTQADLHYVGSCTIDADLMEAADILEGEQIDIVDIDNGNRLTTYAITGDRGTGVIGINGAAARLIS
PGDLVIIIGYAQYSEEDLKNYASRVVFVDGNNKQVELGGDPAQVPDGSGLKNPRHPEA
>Mature_138_residues
MLRTMLKSKIHRATVTQADLHYVGSCTIDADLMEAADILEGEQIDIVDIDNGNRLTTYAITGDRGTGVIGINGAAARLIS
PGDLVIIIGYAQYSEEDLKNYASRVVFVDGNNKQVELGGDPAQVPDGSGLKNPRHPEA

Specific function: Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine

COG id: COG0853

COG function: function code H; Aspartate 1-decarboxylase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the panD family

Homologues:

Organism=Escherichia coli, GI1786323, Length=113, Percent_Identity=48.6725663716814, Blast_Score=122, Evalue=7e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PAND_CORJK (Q4JXL3)

Other databases:

- EMBL:   CR931997
- RefSeq:   YP_250062.1
- ProteinModelPortal:   Q4JXL3
- SMR:   Q4JXL3
- STRING:   Q4JXL3
- GeneID:   3432856
- GenomeReviews:   CR931997_GR
- KEGG:   cjk:jk0292
- NMPDR:   fig|306537.3.peg.961
- eggNOG:   COG0853
- HOGENOM:   HBG302821
- OMA:   LYSKIHR
- ProtClustDB:   PRK05449
- BioCyc:   CJEI306537:JK0292-MONOMER
- GO:   GO:0005737
- GO:   GO:0005488
- HAMAP:   MF_00446
- InterPro:   IPR009010
- InterPro:   IPR003190
- Gene3D:   G3DSA:2.40.40.20
- PANTHER:   PTHR21012
- PIRSF:   PIRSF006246
- ProDom:   PD009294
- TIGRFAMs:   TIGR00223

Pfam domain/function: PF02261 Asp_decarbox; SSF50692 Asp_decarb_fold

EC number: =4.1.1.11

Molecular weight: Translated: 14767; Mature: 14767

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: ACT_SITE 25-25 ACT_SITE 58-58 BINDING 57-57

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRTMLKSKIHRATVTQADLHYVGSCTIDADLMEAADILEGEQIDIVDIDNGNRLTTYAI
CCHHHHHHHHHHHHCCCCCEEEEEEEEECHHHHHHHHHCCCCEEEEEECCCCCEEEEEEE
TGDRGTGVIGINGAAARLISPGDLVIIIGYAQYSEEDLKNYASRVVFVDGNNKQVELGGD
ECCCCCEEEEECCCEEEEECCCCEEEEEEECCCCHHHHHHHHCEEEEECCCCCEEEECCC
PAQVPDGSGLKNPRHPEA
CCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLRTMLKSKIHRATVTQADLHYVGSCTIDADLMEAADILEGEQIDIVDIDNGNRLTTYAI
CCHHHHHHHHHHHHCCCCCEEEEEEEEECHHHHHHHHHCCCCEEEEEECCCCCEEEEEEE
TGDRGTGVIGINGAAARLISPGDLVIIIGYAQYSEEDLKNYASRVVFVDGNNKQVELGGD
ECCCCCEEEEECCCEEEEECCCCEEEEEEECCCCHHHHHHHHCEEEEECCCCCEEEECCC
PAQVPDGSGLKNPRHPEA
CCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA