| Definition | Corynebacterium jeikeium K411, complete genome. |
|---|---|
| Accession | NC_007164 |
| Length | 2,462,499 |
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The map label for this gene is yceA [C]
Identifier: 68535305
GI number: 68535305
Start: 297023
End: 297952
Strand: Direct
Name: yceA [C]
Synonym: jk0240
Alternate gene names: 68535305
Gene position: 297023-297952 (Clockwise)
Preceding gene: 68535304
Following gene: 68535308
Centisome position: 12.06
GC content: 62.04
Gene sequence:
>930_bases ATGGGACATAGCGCAACCGACCTCAACGAAACTCGAATCCTGCTGTACTACTGCTTCACCCCGATCGACGACCCGACCGC GGTGATGCTGTGGCAGCGCGCGCTATGCGAACAGCTGGAGCTTAAAGGCCGCATCCTCATCAGCAAGCACGGCATCAACG GCACCGTCGGCGGCTCGCTGGCCAGCTGCAAGCAGTACGTGCGCCGCACCCGCGAATTCCCGGGCTTCAAGAAGATGGAA TTCAAGTGGTCCGCGGGCTCGGCCGACGACTTCCCGCGCCTGTCCGTGAAGGTGCGCGAAGAAATCGTGGCTTTCGGCGC TCCGGACGAGCTGAAGGTAGACGAAAACGGTGTGATTGGCGGCGGCGTGCACCTGAAGCCGGAGGAAGTGAACAAGCTGG TGGAGGAGCGCGGCGACGAGGTCGTCTTCTTCGACGGGCGCAACGCCATGGAAGCGGAGATCGGCAAGTTCAAAAACGCC ATCGTGCCGGATGTGCGCACCACCCACGACTTCATCAGCGAGATCGAATCCGGCAAGTACGACGACCTCAAGGACAAGCC GGTTGTCACGTACTGCACGGGTGGCATCCGCTGTGAAATCCTGAGCTCGCTGATGAAGAACCGCGGGTTCGAGGAGGTTT ACCAGATCGACGGCGGCATCGTCCGCTACGGCGAAAAGTACGGGGACAAGGGGCTTTGGGAGGGTTCCCTGTATGTTTTC GACGGGCGCATGCACATGGAATTTAGTGATGACGCCGCTACGCTGGGCCGCTGCCGAGCATGTGGGCACGCGACCAACGA CTTCCACAACTGCGTGAACGAACAGTGCCGCGAGCAGATCCTGCTGTGCGAGGAGTGCGCCGCGGACCCGGAGAGCGCCA CGTGCGGGCGCAAGGAGTGCGCTGAGGTCGCAGCGGAGATGGTGGGCTAG
Upstream 100 bases:
>100_bases ATCGACCAAGCCCGGCAGCGCGCCGAAGAGGCCGCCGGGTACATCGAGGTGCGGCCGACGGTTTTCGCAGAAGGCGGGCA GTAGACCTAAAATCCGAGGT
Downstream 100 bases:
>100_bases AGTTTCAGCTCCATAGTGACGTGGGGGATGCCCTCCTCGTCGAAAGGCTCGCCAACCGGCTGGAAGCCGAACTTCGCGTA GAAGTCCTGCGCTTGGGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MGHSATDLNETRILLYYCFTPIDDPTAVMLWQRALCEQLELKGRILISKHGINGTVGGSLASCKQYVRRTREFPGFKKME FKWSAGSADDFPRLSVKVREEIVAFGAPDELKVDENGVIGGGVHLKPEEVNKLVEERGDEVVFFDGRNAMEAEIGKFKNA IVPDVRTTHDFISEIESGKYDDLKDKPVVTYCTGGIRCEILSSLMKNRGFEEVYQIDGGIVRYGEKYGDKGLWEGSLYVF DGRMHMEFSDDAATLGRCRACGHATNDFHNCVNEQCREQILLCEECAADPESATCGRKECAEVAAEMVG
Sequences:
>Translated_309_residues MGHSATDLNETRILLYYCFTPIDDPTAVMLWQRALCEQLELKGRILISKHGINGTVGGSLASCKQYVRRTREFPGFKKME FKWSAGSADDFPRLSVKVREEIVAFGAPDELKVDENGVIGGGVHLKPEEVNKLVEERGDEVVFFDGRNAMEAEIGKFKNA IVPDVRTTHDFISEIESGKYDDLKDKPVVTYCTGGIRCEILSSLMKNRGFEEVYQIDGGIVRYGEKYGDKGLWEGSLYVF DGRMHMEFSDDAATLGRCRACGHATNDFHNCVNEQCREQILLCEECAADPESATCGRKECAEVAAEMVG >Mature_308_residues GHSATDLNETRILLYYCFTPIDDPTAVMLWQRALCEQLELKGRILISKHGINGTVGGSLASCKQYVRRTREFPGFKKMEF KWSAGSADDFPRLSVKVREEIVAFGAPDELKVDENGVIGGGVHLKPEEVNKLVEERGDEVVFFDGRNAMEAEIGKFKNAI VPDVRTTHDFISEIESGKYDDLKDKPVVTYCTGGIRCEILSSLMKNRGFEEVYQIDGGIVRYGEKYGDKGLWEGSLYVFD GRMHMEFSDDAATLGRCRACGHATNDFHNCVNEQCREQILLCEECAADPESATCGRKECAEVAAEMVG
Specific function: Unknown. [C]
COG id: COG1054
COG function: function code R; Predicted sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 rhodanese domain
Homologues:
Organism=Homo sapiens, GI111038120, Length=299, Percent_Identity=37.7926421404682, Blast_Score=194, Evalue=1e-49, Organism=Escherichia coli, GI1787294, Length=278, Percent_Identity=31.6546762589928, Blast_Score=125, Evalue=3e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y240_CORJK (Q4JXR5)
Other databases:
- EMBL: CR931997 - RefSeq: YP_250010.1 - ProteinModelPortal: Q4JXR5 - SMR: Q4JXR5 - STRING: Q4JXR5 - GeneID: 3432764 - GenomeReviews: CR931997_GR - KEGG: cjk:jk0240 - NMPDR: fig|306537.3.peg.672 - eggNOG: COG1054 - HOGENOM: HBG366219 - OMA: FDNALDY - ProtClustDB: PRK00142 - BioCyc: CJEI306537:JK0240-MONOMER - HAMAP: MF_00469 - InterPro: IPR001763 - InterPro: IPR020936 - Gene3D: G3DSA:3.40.250.10 - SMART: SM00450
Pfam domain/function: PF00581 Rhodanese; SSF52821 Rhodanese-like
EC number: NA
Molecular weight: Translated: 34453; Mature: 34322
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS50206 RHODANESE_3
Important sites: ACT_SITE 192-192
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGHSATDLNETRILLYYCFTPIDDPTAVMLWQRALCEQLELKGRILISKHGINGTVGGSL CCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCH ASCKQYVRRTREFPGFKKMEFKWSAGSADDFPRLSVKVREEIVAFGAPDELKVDENGVIG HHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCEEE GGVHLKPEEVNKLVEERGDEVVFFDGRNAMEAEIGKFKNAIVPDVRTTHDFISEIESGKY CCEEECHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC DDLKDKPVVTYCTGGIRCEILSSLMKNRGFEEVYQIDGGIVRYGEKYGDKGLWEGSLYVF CCCCCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHHCCCEEECCHHCCCCCCCCCEEEEE DGRMHMEFSDDAATLGRCRACGHATNDFHNCVNEQCREQILLCEECAADPESATCGRKEC ECEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH AEVAAEMVG HHHHHHHCC >Mature Secondary Structure GHSATDLNETRILLYYCFTPIDDPTAVMLWQRALCEQLELKGRILISKHGINGTVGGSL CCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCH ASCKQYVRRTREFPGFKKMEFKWSAGSADDFPRLSVKVREEIVAFGAPDELKVDENGVIG HHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCEEE GGVHLKPEEVNKLVEERGDEVVFFDGRNAMEAEIGKFKNAIVPDVRTTHDFISEIESGKY CCEEECHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC DDLKDKPVVTYCTGGIRCEILSSLMKNRGFEEVYQIDGGIVRYGEKYGDKGLWEGSLYVF CCCCCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHHCCCEEECCHHCCCCCCCCCEEEEE DGRMHMEFSDDAATLGRCRACGHATNDFHNCVNEQCREQILLCEECAADPESATCGRKEC ECEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH AEVAAEMVG HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA