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The map label for this gene is surB [H]

Identifier: 68535285

GI number: 68535285

Start: 273005

End: 275014

Strand: Direct

Name: surB [H]

Synonym: jk0220

Alternate gene names: 68535285

Gene position: 273005-275014 (Clockwise)

Preceding gene: 68535284

Following gene: 68535287

Centisome position: 11.09

GC content: 59.3

Gene sequence:

>2010_bases
ATGATGTTTCTCCGCTCCCGCCGCACGATGACTGCTGTCGCGGCTGCCGCCAGCCTGGTGCTGACCGCCACGGCTGTCCC
ACAGTCCCCGTTCTCCCCGGTAGCTGCCCAGGCCGCCACGGCTAACAAGACGCAGGATACGAGCCTGCCGTTGAAGTGCA
CCCTGTTCGCTGCGGGTGGTCCCAAGAATAAGATCCCGTTCATTGGAAGTGGTTTCATGGAGAATCGGGATTTCACGGGT
AACTTTCATGTGACGATGCCTGGACAAGTAGAAGTCGGTGAGGTGTTTGAAGCTAGCGTAAGCATGGATTCACTTTCCGC
CTCGCATTCACTGTTGCGACGGCTGGGCGGTAGCCCCAGTTTCGAAGAAGGTAGCGCGGCCAATAAAGTGCGTTTCGCAG
TGAAGGGCGATGTCGAGCTAGTCAATTCCAATCTTCCTGCCACGTTGGATAAGGGTAAGGGGGTTTTGACTGTTGATAAG
ATGATGCAACCAAGCAAGTCGGGAGACACGGTAACGATTGCTTTCGCGCCTCTAAAGCTGAAGTTCAAAGCGAAGAAGGC
TGGGTTGGTTGAGATCCAGACCCCTGAGGCTTATAGGACACCGGATAGTCATGGTGGTGTCAGGAACAACAACATGTTCC
ATGGGGAGGGGATTGCAGGCACTGTTTTGGGCAAAACTCCAGGCTTGCGAGTGACCTGTTTGACTGATCGTTTTACGCCG
CTGGGTGCGACCCAGGTAGGTAAAGATGCTGAGTTCAATGAGCCTAAATACTCCGCCATTGAAGTGAAGCAGCAGGATAC
TGCTACCTCGAAGAACACCGCGCAGGCGCCGGAAGGTACCACCTACGCTAAGGGCGCCAACGCTCCGGAGTGGGCGACTG
TCGGTCAGGACGGCACCGTCACCGTCAAGCCAAGCCTAGACGTGAAGCCTGGCGACTACACCGTCCCGGTCGTTGTCACT
TACCCGGACTCTTCTACCGACAATGCCGTTGTAAACGTGACGGTAAAGGAGAAGGGGAAGTCCCTCGCGGAGCAGCACGA
TCCGCAGTTCGGCGAGACCACCGTCGAACAGGAAGGCGCCGCCACCATCGCTGCCCCGGAGGGGCTACCGGAGGGGACGA
AGGTCGCCGCTGGTGAGGGTGTTCCGGAGTGGGTCACCGTTAAGGAGGACGGCTCTATCGAGACAAAGCCCACCCGGGAG
ACCGAGCCCAAGGATTACACCATCCCGGTTACTGTCACCTATCCCGATGGCACTACGGACAAGGCTGAGCTGAAGGTCAC
TGTCACGGAGCGCGCCATTAACGAAATCCACGATCCGACTTACTCTGACGTGACGGTGAAGCAGGGTGACGAAGTGACCG
CTCCGGCTCCGACCGATGTGGCTGAGGGTGCGACCTTCGAGGCCGGCGAAGGTGTACCGTCGTGGATCACCGTCAACCCG
GACGGCACCGTCACCGCCAAGCCGGGCCTGGAGGTTGAGGCCAAGGAGTACACCGTTCCGGTGAAGGTCTCCTACAAGGA
TGGTTCCAGCGACGACACGACCGTGAACATTACCGTCACCGTGAAGCCTGCCAACGAGATCCACGATCCTTCCTTCGAGG
ATGTCTCCGTAAAGCCGGGCGAGACCGTCACATCCAAGGTGTCGGGTGATACCGGCGAAGGTGCTAAGTTCACCGCTGGT
GAGGGCGCCCCGGAGTGGGCCACCGTCAAGCCAGACGGCACTGTGACCCTAAAGCCGGGCAAGGACGTCGAGCCGGGCGA
GTACACCGTACCGGTTGAAATCACCTACTCGGATGGGGCGTCCTCCACCGTGGAGCTGAAGGTGAACGTAGAAAAGCAGG
ACAAACCGAGCGGAAGCTCCGGATCCAGCAACGGTTCCAGCAGCTCCAGCGGAGTCGCTGGTTCCAGCCCGCTGGGTAAG
TTCTTCGCGGCCCTGTTCGGGACGATTGCCATCGGCGCTGGCCTGTTCGGCCTGTACAACTGGGCCCGCGCCCACGGCTA
CGTCCGCTAA

Upstream 100 bases:

>100_bases
GTGGAACCTTAAGAGTGGCGATAGTAGATTCTTAAAGAAGTTGGGGAATTGTTCCCCGCAACGACTTAATGTCGTCTCGC
TCTACTTTGAGGTGCCTCTT

Downstream 100 bases:

>100_bases
CTGCGAGCGCGCTTAGTTGCGCACGAACTGCCCATCCCGCAGGTGGCGGTAAAACGTCACCGACTTCAGCGGGCGGGGAT
GGCGCACCCCATCACGGGTG

Product: putative cell surface protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 669; Mature: 669

Protein sequence:

>669_residues
MMFLRSRRTMTAVAAAASLVLTATAVPQSPFSPVAAQAATANKTQDTSLPLKCTLFAAGGPKNKIPFIGSGFMENRDFTG
NFHVTMPGQVEVGEVFEASVSMDSLSASHSLLRRLGGSPSFEEGSAANKVRFAVKGDVELVNSNLPATLDKGKGVLTVDK
MMQPSKSGDTVTIAFAPLKLKFKAKKAGLVEIQTPEAYRTPDSHGGVRNNNMFHGEGIAGTVLGKTPGLRVTCLTDRFTP
LGATQVGKDAEFNEPKYSAIEVKQQDTATSKNTAQAPEGTTYAKGANAPEWATVGQDGTVTVKPSLDVKPGDYTVPVVVT
YPDSSTDNAVVNVTVKEKGKSLAEQHDPQFGETTVEQEGAATIAAPEGLPEGTKVAAGEGVPEWVTVKEDGSIETKPTRE
TEPKDYTIPVTVTYPDGTTDKAELKVTVTERAINEIHDPTYSDVTVKQGDEVTAPAPTDVAEGATFEAGEGVPSWITVNP
DGTVTAKPGLEVEAKEYTVPVKVSYKDGSSDDTTVNITVTVKPANEIHDPSFEDVSVKPGETVTSKVSGDTGEGAKFTAG
EGAPEWATVKPDGTVTLKPGKDVEPGEYTVPVEITYSDGASSTVELKVNVEKQDKPSGSSGSSNGSSSSSGVAGSSPLGK
FFAALFGTIAIGAGLFGLYNWARAHGYVR

Sequences:

>Translated_669_residues
MMFLRSRRTMTAVAAAASLVLTATAVPQSPFSPVAAQAATANKTQDTSLPLKCTLFAAGGPKNKIPFIGSGFMENRDFTG
NFHVTMPGQVEVGEVFEASVSMDSLSASHSLLRRLGGSPSFEEGSAANKVRFAVKGDVELVNSNLPATLDKGKGVLTVDK
MMQPSKSGDTVTIAFAPLKLKFKAKKAGLVEIQTPEAYRTPDSHGGVRNNNMFHGEGIAGTVLGKTPGLRVTCLTDRFTP
LGATQVGKDAEFNEPKYSAIEVKQQDTATSKNTAQAPEGTTYAKGANAPEWATVGQDGTVTVKPSLDVKPGDYTVPVVVT
YPDSSTDNAVVNVTVKEKGKSLAEQHDPQFGETTVEQEGAATIAAPEGLPEGTKVAAGEGVPEWVTVKEDGSIETKPTRE
TEPKDYTIPVTVTYPDGTTDKAELKVTVTERAINEIHDPTYSDVTVKQGDEVTAPAPTDVAEGATFEAGEGVPSWITVNP
DGTVTAKPGLEVEAKEYTVPVKVSYKDGSSDDTTVNITVTVKPANEIHDPSFEDVSVKPGETVTSKVSGDTGEGAKFTAG
EGAPEWATVKPDGTVTLKPGKDVEPGEYTVPVEITYSDGASSTVELKVNVEKQDKPSGSSGSSNGSSSSSGVAGSSPLGK
FFAALFGTIAIGAGLFGLYNWARAHGYVR
>Mature_669_residues
MMFLRSRRTMTAVAAAASLVLTATAVPQSPFSPVAAQAATANKTQDTSLPLKCTLFAAGGPKNKIPFIGSGFMENRDFTG
NFHVTMPGQVEVGEVFEASVSMDSLSASHSLLRRLGGSPSFEEGSAANKVRFAVKGDVELVNSNLPATLDKGKGVLTVDK
MMQPSKSGDTVTIAFAPLKLKFKAKKAGLVEIQTPEAYRTPDSHGGVRNNNMFHGEGIAGTVLGKTPGLRVTCLTDRFTP
LGATQVGKDAEFNEPKYSAIEVKQQDTATSKNTAQAPEGTTYAKGANAPEWATVGQDGTVTVKPSLDVKPGDYTVPVVVT
YPDSSTDNAVVNVTVKEKGKSLAEQHDPQFGETTVEQEGAATIAAPEGLPEGTKVAAGEGVPEWVTVKEDGSIETKPTRE
TEPKDYTIPVTVTYPDGTTDKAELKVTVTERAINEIHDPTYSDVTVKQGDEVTAPAPTDVAEGATFEAGEGVPSWITVNP
DGTVTAKPGLEVEAKEYTVPVKVSYKDGSSDDTTVNITVTVKPANEIHDPSFEDVSVKPGETVTSKVSGDTGEGAKFTAG
EGAPEWATVKPDGTVTLKPGKDVEPGEYTVPVEITYSDGASSTVELKVNVEKQDKPSGSSGSSNGSSSSSGVAGSSPLGK
FFAALFGTIAIGAGLFGLYNWARAHGYVR

Specific function: May play a role in both virulence and immunity [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall; Peptidoglycan-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014933
- InterPro:   IPR005877
- InterPro:   IPR019948
- InterPro:   IPR019950
- InterPro:   IPR019931
- InterPro:   IPR012706
- InterPro:   IPR001899 [H]

Pfam domain/function: PF08829 AlphaC_N; PF00746 Gram_pos_anchor; PF08428 Rib; PF04650 YSIRK_signal [H]

EC number: NA

Molecular weight: Translated: 69967; Mature: 69967

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: PS50268 CADHERIN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMFLRSRRTMTAVAAAASLVLTATAVPQSPFSPVAAQAATANKTQDTSLPLKCTLFAAGG
CCEECCCCHHHHHHHHHEEEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCEEEEEEECCC
PKNKIPFIGSGFMENRDFTGNFHVTMPGQVEVGEVFEASVSMDSLSASHSLLRRLGGSPS
CCCCCCEEECCCCCCCCCCCEEEEEECCCEEHHHHHEECCCHHHHHHHHHHHHHHCCCCC
FEEGSAANKVRFAVKGDVELVNSNLPATLDKGKGVLTVDKMMQPSKSGDTVTIAFAPLKL
CCCCCCCCEEEEEEECCEEEECCCCCEEECCCCCEEEEHHHCCCCCCCCEEEEEEEEEEE
KFKAKKAGLVEIQTPEAYRTPDSHGGVRNNNMFHGEGIAGTVLGKTPGLRVTCLTDRFTP
EEEECCCCEEEEECCCHHCCCCCCCCCCCCCEEECCCCEEEEECCCCCCEEEEEECCCCC
LGATQVGKDAEFNEPKYSAIEVKQQDTATSKNTAQAPEGTTYAKGANAPEWATVGQDGTV
CCCHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCEECCCCCEE
TVKPSLDVKPGDYTVPVVVTYPDSSTDNAVVNVTVKEKGKSLAEQHDPQFGETTVEQEGA
EECCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEHHCCHHHHHHCCCCCCCCCHHCCCC
ATIAAPEGLPEGTKVAAGEGVPEWVTVKEDGSIETKPTRETEPKDYTIPVTVTYPDGTTD
EEEECCCCCCCCCEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCC
KAELKVTVTERAINEIHDPTYSDVTVKQGDEVTAPAPTDVAEGATFEAGEGVPSWITVNP
CEEEEEEEHHHHHHHHCCCCCCCEEEECCCEECCCCCCCHHCCCEEECCCCCCCEEEECC
DGTVTAKPGLEVEAKEYTVPVKVSYKDGSSDDTTVNITVTVKPANEIHDPSFEDVSVKPG
CCCEEECCCCEEEECEEEEEEEEEECCCCCCCCEEEEEEEEECCHHCCCCCCCCEECCCC
ETVTSKVSGDTGEGAKFTAGEGAPEWATVKPDGTVTLKPGKDVEPGEYTVPVEITYSDGA
CCEEEECCCCCCCCCEEECCCCCCCEEEECCCCEEEECCCCCCCCCCEEEEEEEEECCCC
SSTVELKVNVEKQDKPSGSSGSSNGSSSSSGVAGSSPLGKFFAALFGTIAIGAGLFGLYN
CEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
WARAHGYVR
HHHHCCCCC
>Mature Secondary Structure
MMFLRSRRTMTAVAAAASLVLTATAVPQSPFSPVAAQAATANKTQDTSLPLKCTLFAAGG
CCEECCCCHHHHHHHHHEEEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCEEEEEEECCC
PKNKIPFIGSGFMENRDFTGNFHVTMPGQVEVGEVFEASVSMDSLSASHSLLRRLGGSPS
CCCCCCEEECCCCCCCCCCCEEEEEECCCEEHHHHHEECCCHHHHHHHHHHHHHHCCCCC
FEEGSAANKVRFAVKGDVELVNSNLPATLDKGKGVLTVDKMMQPSKSGDTVTIAFAPLKL
CCCCCCCCEEEEEEECCEEEECCCCCEEECCCCCEEEEHHHCCCCCCCCEEEEEEEEEEE
KFKAKKAGLVEIQTPEAYRTPDSHGGVRNNNMFHGEGIAGTVLGKTPGLRVTCLTDRFTP
EEEECCCCEEEEECCCHHCCCCCCCCCCCCCEEECCCCEEEEECCCCCCEEEEEECCCCC
LGATQVGKDAEFNEPKYSAIEVKQQDTATSKNTAQAPEGTTYAKGANAPEWATVGQDGTV
CCCHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCEECCCCCEE
TVKPSLDVKPGDYTVPVVVTYPDSSTDNAVVNVTVKEKGKSLAEQHDPQFGETTVEQEGA
EECCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEHHCCHHHHHHCCCCCCCCCHHCCCC
ATIAAPEGLPEGTKVAAGEGVPEWVTVKEDGSIETKPTRETEPKDYTIPVTVTYPDGTTD
EEEECCCCCCCCCEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCC
KAELKVTVTERAINEIHDPTYSDVTVKQGDEVTAPAPTDVAEGATFEAGEGVPSWITVNP
CEEEEEEEHHHHHHHHCCCCCCCEEEECCCEECCCCCCCHHCCCEEECCCCCCCEEEECC
DGTVTAKPGLEVEAKEYTVPVKVSYKDGSSDDTTVNITVTVKPANEIHDPSFEDVSVKPG
CCCEEECCCCEEEECEEEEEEEEEECCCCCCCCEEEEEEEEECCHHCCCCCCCCEECCCC
ETVTSKVSGDTGEGAKFTAGEGAPEWATVKPDGTVTLKPGKDVEPGEYTVPVEITYSDGA
CCEEEECCCCCCCCCEEECCCCCCCEEEECCCCEEEECCCCCCCCCCEEEEEEEEECCCC
SSTVELKVNVEKQDKPSGSSGSSNGSSSSSGVAGSSPLGKFFAALFGTIAIGAGLFGLYN
CEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
WARAHGYVR
HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1438195 [H]