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The map label for this gene is dcd

Identifier: 68535239

GI number: 68535239

Start: 217429

End: 217995

Strand: Direct

Name: dcd

Synonym: jk0174

Alternate gene names: 68535239

Gene position: 217429-217995 (Clockwise)

Preceding gene: 68535238

Following gene: 68535244

Centisome position: 8.83

GC content: 63.49

Gene sequence:

>567_bases
GTGTTACTTTCAGACCGAGACATCCGCGCCGCCATCAACTCCGGCGAGCTGAAGATCGACCCCCACGACGATCAGATGGT
TCAGCCATCCAGCATCGACGTGCGCCTCGACGGCCTGTTCCGCGTGTTCAATAACTCCAAGTACACGCACATCGACCCGA
AGCAGCCGCAAGAGGAACTCACCACCCTGGTGGAAGTCCCTGACGACGAGGCCTTCATTCTGCACCCCGGCGAGTTCGTC
CTGGGTGCCACCCTGGAATGCTTTGGCATCCCCGCCCACCTGGCGGGTCGCCTAGAAGGCAAGTCCTCCCTGGGCCGCCT
GGGTCTGCTCACGCACTCCACGGCAGGGTTCATCGACCCGGGCTTCACCGGGCACATCACCCTGGAGCTTTCCAACACCG
CTAACCTGCCCATCGCCCTCTACCCGGGCATGAAGATCGGCCAGCTGGCACTATTCACCATGACCAGCCCGGCGGAAGCC
CCCTACGGCAGCGGCACCCTGGGGTCCAAGTACCAGGGGCAACGCGGCCCGACCCCCTCCAAGGCCTACCTGAACTTCCA
GAACTAG

Upstream 100 bases:

>100_bases
AGGAATGGGAAGCCGCGGGCTGGAACTTCCTGGCACTGGGGCGGGGCTAGTACACGGCTAGCTGGCTGCGCACAGCCCCA
CACCCGCTAGGCTATAGAGC

Downstream 100 bases:

>100_bases
CTGGGGCGCGAGGTGGCGTCAATAAAAAAGGCGCCCCAGAAGGGCGCCAGCCTGTAACAGCTACTGCCGGTAGCTAGCCA
GGAAGTTACCCAAGCGCTCG

Product: deoxycytidine triphosphate deaminase

Products: NA

Alternate protein names: dCTP deaminase

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MLLSDRDIRAAINSGELKIDPHDDQMVQPSSIDVRLDGLFRVFNNSKYTHIDPKQPQEELTTLVEVPDDEAFILHPGEFV
LGATLECFGIPAHLAGRLEGKSSLGRLGLLTHSTAGFIDPGFTGHITLELSNTANLPIALYPGMKIGQLALFTMTSPAEA
PYGSGTLGSKYQGQRGPTPSKAYLNFQN

Sequences:

>Translated_188_residues
MLLSDRDIRAAINSGELKIDPHDDQMVQPSSIDVRLDGLFRVFNNSKYTHIDPKQPQEELTTLVEVPDDEAFILHPGEFV
LGATLECFGIPAHLAGRLEGKSSLGRLGLLTHSTAGFIDPGFTGHITLELSNTANLPIALYPGMKIGQLALFTMTSPAEA
PYGSGTLGSKYQGQRGPTPSKAYLNFQN
>Mature_188_residues
MLLSDRDIRAAINSGELKIDPHDDQMVQPSSIDVRLDGLFRVFNNSKYTHIDPKQPQEELTTLVEVPDDEAFILHPGEFV
LGATLECFGIPAHLAGRLEGKSSLGRLGLLTHSTAGFIDPGFTGHITLELSNTANLPIALYPGMKIGQLALFTMTSPAEA
PYGSGTLGSKYQGQRGPTPSKAYLNFQN

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family

Homologues:

Organism=Escherichia coli, GI1788379, Length=190, Percent_Identity=41.0526315789474, Blast_Score=141, Evalue=3e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DCD_CORJK (Q4JXY1)

Other databases:

- EMBL:   CR931997
- RefSeq:   YP_249944.1
- ProteinModelPortal:   Q4JXY1
- SMR:   Q4JXY1
- STRING:   Q4JXY1
- GeneID:   3433765
- GenomeReviews:   CR931997_GR
- KEGG:   cjk:jk0174
- NMPDR:   fig|306537.3.peg.247
- eggNOG:   COG0717
- HOGENOM:   HBG553199
- OMA:   FSGHVTL
- ProtClustDB:   PRK00416
- BioCyc:   CJEI306537:JK0174-MONOMER
- HAMAP:   MF_00146
- InterPro:   IPR011962
- InterPro:   IPR008180
- TIGRFAMs:   TIGR02274

Pfam domain/function: PF00692 dUTPase

EC number: =3.5.4.13

Molecular weight: Translated: 20350; Mature: 20350

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLSDRDIRAAINSGELKIDPHDDQMVQPSSIDVRLDGLFRVFNNSKYTHIDPKQPQEEL
CCCCCCCCEEEECCCEEEECCCCCCEECCCCCEEEEEEEEEEECCCCEEECCCCCCHHHH
TTLVEVPDDEAFILHPGEFVLGATLECFGIPAHLAGRLEGKSSLGRLGLLTHSTAGFIDP
HEEEECCCCCEEEECCCCEEEECEEEEECCCHHHHCCCCCCCCCCEEEEEEECCCCCCCC
GFTGHITLELSNTANLPIALYPGMKIGQLALFTMTSPAEAPYGSGTLGSKYQGQRGPTPS
CCCEEEEEEECCCCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
KAYLNFQN
EEEEEECC
>Mature Secondary Structure
MLLSDRDIRAAINSGELKIDPHDDQMVQPSSIDVRLDGLFRVFNNSKYTHIDPKQPQEEL
CCCCCCCCEEEECCCEEEECCCCCCEECCCCCEEEEEEEEEEECCCCEEECCCCCCHHHH
TTLVEVPDDEAFILHPGEFVLGATLECFGIPAHLAGRLEGKSSLGRLGLLTHSTAGFIDP
HEEEECCCCCEEEECCCCEEEECEEEEECCCHHHHCCCCCCCCCCEEEEEEECCCCCCCC
GFTGHITLELSNTANLPIALYPGMKIGQLALFTMTSPAEAPYGSGTLGSKYQGQRGPTPS
CCCEEEEEEECCCCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
KAYLNFQN
EEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA