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The map label for this gene is rfaB [C]

Identifier: 68535227

GI number: 68535227

Start: 201356

End: 202516

Strand: Direct

Name: rfaB [C]

Synonym: jk0162

Alternate gene names: 68535227

Gene position: 201356-202516 (Clockwise)

Preceding gene: 68535223

Following gene: 68535230

Centisome position: 8.18

GC content: 66.15

Gene sequence:

>1161_bases
ATGAAAGTACTGCTTCTCTGCTGGCGCGACACAAACCACCCCGAAGGTGGCGGCAGCGAACGTTACTTAGAGCGCGTGGG
GGAGTACCTGGTCAACCAGGGCCACCAGGTGGTGTTCCGCACCGCCCACTATCCCGGCTCCAAACGTTCGCAGCAGGTCG
GGCCTAACTTCCGCTTCTCTCGCGGTGGCCGAAACCTGTCGGTCTACCCCCGCGCGCTGGCGGCGATTCTGGCCGCCCGC
CGGGGGCGCGGGTCGCTGGCGGATATTGGCCGCCCGGACGTTGTGGTGGACACGCAAAACGGTGTGCCCTTCTTCGCCTC
CCTGGTCAGCGGCGCGCCCACTGTCGTCTTGACCCACCACTGCCACCGCGAGCAGTGGTCCGTCGCCGGCCCGATCCTCT
CCCGCATCGGTTGGCTGATCGAGTCCACCATCTCGCCGTGGATTCATCGTCGTCGCCGCTGGGTTACCGTTTCCGCCCCC
TCCGCCGAGGAGCTGGTGGAGCTTGGCGTGCCGCGCGGCAACATCGAGATCATTCGTAACGGTATCGATCCGGTTGCGCC
TTCTTTGATTCCGGACGCCCCCAGCCCCAACTCCGACGATGCCAACGAGGAGCAGACGATTCACCTGGTGGCGCTTTCCC
GGTTGGTCCCCCACAAGCAAATCGAGCACGCACTGGACGCGCTGGCCGCCGTGGCACGCACTCATCCGAATGTGCGCCTG
GATGTGATCGGCGACGGATGGTGGGCAGACCGCCTACGGGACTATGCCCGCGAGCTGGGAATTGAGCCGCTTGTGGTGTT
CCACGGCTTCGTGTCCGAGGAATTGAAGCACCGTATCCTCAACCGCGCCTCTGTGCACGTGATGCCCTCCCGCAAGGAGG
GCTGGGGCCTGGCCGTGATCGAGGCGGGACAGCACGGGGTGCCGACGGTTGGTTACGAGTCCTCTGCCGGGCTGCGCGAT
TCCGTCATCGACGGGGAGACCGGCCTGCTGTGCTCTTCCCCCGGCGGGCTGATGAACGCGGTCGAATACCTGTTGGATAA
CCCGGAGAAGCGCCGGGAGATGGGCCGGGCCGCGAAGCGCCGGGCCGAGGAGTTTTCCTGGGATGCCACCGGCGAGGCCT
GGGAGAAACTACTGCGCCAGGAGGTCGCGCGCGGGCGCTAA

Upstream 100 bases:

>100_bases
GTTCATCGAGTGTCTATCTTTTCAGGTTGCGCCGACTCTTTGCACGGATTCACCAAACCCGGCGAAGTCGCAGGCGGTGG
CGACTAACATAGTGTCCATC

Downstream 100 bases:

>100_bases
TCAGCGCTAATCAGCGCTGTGGGTTTTGCCTGTCTTGTCGGGCAGCGGCCGGTTACGGCCGCTCAGCTGCAGCCGGCGGG
TGACGCGCCACAGCCACGCA

Product: putative glycosyltransferase

Products: NA

Alternate protein names: Stealth protein SCO2592 [H]

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MKVLLLCWRDTNHPEGGGSERYLERVGEYLVNQGHQVVFRTAHYPGSKRSQQVGPNFRFSRGGRNLSVYPRALAAILAAR
RGRGSLADIGRPDVVVDTQNGVPFFASLVSGAPTVVLTHHCHREQWSVAGPILSRIGWLIESTISPWIHRRRRWVTVSAP
SAEELVELGVPRGNIEIIRNGIDPVAPSLIPDAPSPNSDDANEEQTIHLVALSRLVPHKQIEHALDALAAVARTHPNVRL
DVIGDGWWADRLRDYARELGIEPLVVFHGFVSEELKHRILNRASVHVMPSRKEGWGLAVIEAGQHGVPTVGYESSAGLRD
SVIDGETGLLCSSPGGLMNAVEYLLDNPEKRREMGRAAKRRAEEFSWDATGEAWEKLLRQEVARGR

Sequences:

>Translated_386_residues
MKVLLLCWRDTNHPEGGGSERYLERVGEYLVNQGHQVVFRTAHYPGSKRSQQVGPNFRFSRGGRNLSVYPRALAAILAAR
RGRGSLADIGRPDVVVDTQNGVPFFASLVSGAPTVVLTHHCHREQWSVAGPILSRIGWLIESTISPWIHRRRRWVTVSAP
SAEELVELGVPRGNIEIIRNGIDPVAPSLIPDAPSPNSDDANEEQTIHLVALSRLVPHKQIEHALDALAAVARTHPNVRL
DVIGDGWWADRLRDYARELGIEPLVVFHGFVSEELKHRILNRASVHVMPSRKEGWGLAVIEAGQHGVPTVGYESSAGLRD
SVIDGETGLLCSSPGGLMNAVEYLLDNPEKRREMGRAAKRRAEEFSWDATGEAWEKLLRQEVARGR
>Mature_386_residues
MKVLLLCWRDTNHPEGGGSERYLERVGEYLVNQGHQVVFRTAHYPGSKRSQQVGPNFRFSRGGRNLSVYPRALAAILAAR
RGRGSLADIGRPDVVVDTQNGVPFFASLVSGAPTVVLTHHCHREQWSVAGPILSRIGWLIESTISPWIHRRRRWVTVSAP
SAEELVELGVPRGNIEIIRNGIDPVAPSLIPDAPSPNSDDANEEQTIHLVALSRLVPHKQIEHALDALAAVARTHPNVRL
DVIGDGWWADRLRDYARELGIEPLVVFHGFVSEELKHRILNRASVHVMPSRKEGWGLAVIEAGQHGVPTVGYESSAGLRD
SVIDGETGLLCSSPGGLMNAVEYLLDNPEKRREMGRAAKRRAEEFSWDATGEAWEKLLRQEVARGR

Specific function: Adds A Galactose Goup To A Glucose Group Of Lps. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the stealth family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 42735; Mature: 42735

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLLLCWRDTNHPEGGGSERYLERVGEYLVNQGHQVVFRTAHYPGSKRSQQVGPNFRFS
CEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHCCCCCEEC
RGGRNLSVYPRALAAILAARRGRGSLADIGRPDVVVDTQNGVPFFASLVSGAPTVVLTHH
CCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCHHHHHHHCCCCEEEEEEC
CHREQWSVAGPILSRIGWLIESTISPWIHRRRRWVTVSAPSAEELVELGVPRGNIEIIRN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCCCCCHHEEEC
GIDPVAPSLIPDAPSPNSDDANEEQTIHLVALSRLVPHKQIEHALDALAAVARTHPNVRL
CCCCCCCCCCCCCCCCCCCCCCCHHEEHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEE
DVIGDGWWADRLRDYARELGIEPLVVFHGFVSEELKHRILNRASVHVMPSRKEGWGLAVI
EEEECCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEE
EAGQHGVPTVGYESSAGLRDSVIDGETGLLCSSPGGLMNAVEYLLDNPEKRREMGRAAKR
ECCCCCCCCCCCCCCCCCCHHCCCCCCCEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHH
RAEEFSWDATGEAWEKLLRQEVARGR
HHHHCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKVLLLCWRDTNHPEGGGSERYLERVGEYLVNQGHQVVFRTAHYPGSKRSQQVGPNFRFS
CEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHCCCCCEEC
RGGRNLSVYPRALAAILAARRGRGSLADIGRPDVVVDTQNGVPFFASLVSGAPTVVLTHH
CCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCHHHHHHHCCCCEEEEEEC
CHREQWSVAGPILSRIGWLIESTISPWIHRRRRWVTVSAPSAEELVELGVPRGNIEIIRN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCCCCCHHEEEC
GIDPVAPSLIPDAPSPNSDDANEEQTIHLVALSRLVPHKQIEHALDALAAVARTHPNVRL
CCCCCCCCCCCCCCCCCCCCCCCHHEEHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEE
DVIGDGWWADRLRDYARELGIEPLVVFHGFVSEELKHRILNRASVHVMPSRKEGWGLAVI
EEEECCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEE
EAGQHGVPTVGYESSAGLRDSVIDGETGLLCSSPGGLMNAVEYLLDNPEKRREMGRAAKR
ECCCCCCCCCCCCCCCCCCHHCCCCCCCEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHH
RAEEFSWDATGEAWEKLLRQEVARGR
HHHHCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]