Click here to switch to the map view.

The map label for this gene is ywmC [H]

Identifier: 68535223

GI number: 68535223

Start: 194520

End: 196460

Strand: Direct

Name: ywmC [H]

Synonym: jk0158

Alternate gene names: 68535223

Gene position: 194520-196460 (Clockwise)

Preceding gene: 68535222

Following gene: 68535227

Centisome position: 7.9

GC content: 60.74

Gene sequence:

>1941_bases
ATGGCTAAAAGAAGCTCGCTGTTATTCGCAATTGCGCTGATCGCAGCACTGGTGACAATCGTCGTACCACCGGCACAGGA
AGCTCGGGCGGAGGACGAGGAGGGTAAGAACATCCCGCCGACGATGCTGATCTTGGATGCCTCCGGATCGATGAAAACTC
CGGACGCCGGTGGACAGACGCGCATGGCTGCCGCGAAGGATGCGGCGCAGCTGTTTTCTGTGGCCGTGCCCAGCGACGCG
GAGTTGGGATTCATGGTCTACGGAACGGAGGTCGGCAACTCGCCGGAAGAACGCGACGCCGGCTGTAAGGACGTAAAAAC
CCTGTTGCCGGTGGAAAAGGGGAACGTAACCAAGATTCCCGCAGAAGTCGGCAAAGTGGAGGCTTCCGGTCACACACCGA
TGGGCCCAGCTTTGAGGCAAGCCGCCGAGGAGCTGCCGAAGGACGGCGAGCGCTCGATCGTGCTGGTATCCGACGGCGAG
GACACCTGCGCCCCACCACCAGTGTGCGAGGTGGCCAAGGATCTGAAGAAGGAAGGCATTGACCTCACCATCAATACCGT
TGGCTTCCTAGTGGATTCCAAGGCCCGCAAGGAGCTGGAGTGTATCGCCGAGGCAGGCGGCGGCGAGTACATGGATGCCA
AGGACACCGTGAGTTTGGCTGATTCCATGAAGCGGCTGACTACCCGCACGGCCCAGACCACTGAGACAGAAGCGGAGGAG
ATCAGCGGAGGAGATGATTACTCATCGGCGGCTAAGGTGCCGGCCGATGTGGAGACGTTCTCCACGAAGCTGCGTGAAAA
GTCCGGTGGGGACCGGGCGGACGAGGACGGCGCCGAGTACTTCAGTACCCCCATCGCCGAAGGCGAGCGCCTGGCGCTCA
GCGTGGCCACGATGCCTCCGCCCTCCCAGGGCGATGGGCTGGGGAAGTCTAACTTTGCGCTCAAGTTGGACGCAGAGGAG
CTAGATTGCTACCTGGACAACAGTGGAGACACCGGGATCATCGATTCCAACGGACCGTTCTTCTCCTCCTACACAACGAA
GCGAGCAGGCGAAGACTGCCCAGCAGGTGACTTCAAGTTCAAGGTAGTGCGCAAGAGTGGCCCGTACGAGGGGCAGGAGA
TTCCCGCGGAGGTCACCATCAAGCGCTTCGCGAACGAAGACCTCAATGGTGTTCCGGAGCCTTTCGAGGAAGAGAGCTTC
TCCCATGAGGATTCCCCGCAAGCTGCCGAAGACGTGGAGACGGTGAAGCCGGGGGCGTGGTTCCACGACGCCGCGGAGCT
CAAGGCGGACGGCAAGTCTACGGTGAAGGCCGAAATCGTGCCGGGCGAAACTCACGTGTTCAAGATCAAGGCTGAGTATG
GGCAGAAGCTGCGGGGTGGGATGAAGCTGGTCGCGGCTCCTGACAAGGAGCTGGCGCGCATCTCTCAATTGCAGGTGCGA
ACCTTGAACTCTGCGCGACAGGCGGCTTCTTCGCAGGAAAGTCAATCTGTCAGCCCGCCCACTGAGGGTCAGTCCGTTGC
CTTCGGCCACGCCGCCAGGCTGAACTATCGCAACATGGTGGGTGATGGTGAGGAACAACCGAGTGATGTTGCGGCGCGGA
AATCTTGGCTGGATGGGGACCAGTACATCGTGGTTTTCTTCAACAACAGCTGGGGTGGCGGCGAACACCGGGACGTTTCA
GAGGTGAAGAACGAGGTCGCCACCTATGAGCTCACCACAGAGCTCACGGGGGAGAAGATTCCCGGCCCGAAGTTCTCGGA
AGCTTCGCATCCGCAGGACGAGGACAGTGAAGACAACTCCAAGCAGGCTGCTGAATCCGAGGAGAAAGACAACGAAGAGT
CCGGCTCGAGCAACAACCTGATCTGGTACAGCGTCGTCGTGGGCGTGCTGGTAGCCCTGGGCGGTGGCGGCGTGGCCCTC
GCCTACAGCCGCAAGCGCTAA

Upstream 100 bases:

>100_bases
ACAAGACAGAGGTTAAGGACTAGCCAACCTCAAAAAGGCCTGCCATTGTTTCCCCTTCGATATAAGCTGATCCGCAGGAA
TTACTGAAGGGCGTTAATCA

Downstream 100 bases:

>100_bases
GCGCTCCAATCCATAAACTAAGCCCCCAACTCCAGCGGAGGTAATCCGCGAAGGGAGTTGGGGGCTTTAAGCGTTTTCGC
CCTGGAGCCTCGCCCGGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 646; Mature: 645

Protein sequence:

>646_residues
MAKRSSLLFAIALIAALVTIVVPPAQEARAEDEEGKNIPPTMLILDASGSMKTPDAGGQTRMAAAKDAAQLFSVAVPSDA
ELGFMVYGTEVGNSPEERDAGCKDVKTLLPVEKGNVTKIPAEVGKVEASGHTPMGPALRQAAEELPKDGERSIVLVSDGE
DTCAPPPVCEVAKDLKKEGIDLTINTVGFLVDSKARKELECIAEAGGGEYMDAKDTVSLADSMKRLTTRTAQTTETEAEE
ISGGDDYSSAAKVPADVETFSTKLREKSGGDRADEDGAEYFSTPIAEGERLALSVATMPPPSQGDGLGKSNFALKLDAEE
LDCYLDNSGDTGIIDSNGPFFSSYTTKRAGEDCPAGDFKFKVVRKSGPYEGQEIPAEVTIKRFANEDLNGVPEPFEEESF
SHEDSPQAAEDVETVKPGAWFHDAAELKADGKSTVKAEIVPGETHVFKIKAEYGQKLRGGMKLVAAPDKELARISQLQVR
TLNSARQAASSQESQSVSPPTEGQSVAFGHAARLNYRNMVGDGEEQPSDVAARKSWLDGDQYIVVFFNNSWGGGEHRDVS
EVKNEVATYELTTELTGEKIPGPKFSEASHPQDEDSEDNSKQAAESEEKDNEESGSSNNLIWYSVVVGVLVALGGGGVAL
AYSRKR

Sequences:

>Translated_646_residues
MAKRSSLLFAIALIAALVTIVVPPAQEARAEDEEGKNIPPTMLILDASGSMKTPDAGGQTRMAAAKDAAQLFSVAVPSDA
ELGFMVYGTEVGNSPEERDAGCKDVKTLLPVEKGNVTKIPAEVGKVEASGHTPMGPALRQAAEELPKDGERSIVLVSDGE
DTCAPPPVCEVAKDLKKEGIDLTINTVGFLVDSKARKELECIAEAGGGEYMDAKDTVSLADSMKRLTTRTAQTTETEAEE
ISGGDDYSSAAKVPADVETFSTKLREKSGGDRADEDGAEYFSTPIAEGERLALSVATMPPPSQGDGLGKSNFALKLDAEE
LDCYLDNSGDTGIIDSNGPFFSSYTTKRAGEDCPAGDFKFKVVRKSGPYEGQEIPAEVTIKRFANEDLNGVPEPFEEESF
SHEDSPQAAEDVETVKPGAWFHDAAELKADGKSTVKAEIVPGETHVFKIKAEYGQKLRGGMKLVAAPDKELARISQLQVR
TLNSARQAASSQESQSVSPPTEGQSVAFGHAARLNYRNMVGDGEEQPSDVAARKSWLDGDQYIVVFFNNSWGGGEHRDVS
EVKNEVATYELTTELTGEKIPGPKFSEASHPQDEDSEDNSKQAAESEEKDNEESGSSNNLIWYSVVVGVLVALGGGGVAL
AYSRKR
>Mature_645_residues
AKRSSLLFAIALIAALVTIVVPPAQEARAEDEEGKNIPPTMLILDASGSMKTPDAGGQTRMAAAKDAAQLFSVAVPSDAE
LGFMVYGTEVGNSPEERDAGCKDVKTLLPVEKGNVTKIPAEVGKVEASGHTPMGPALRQAAEELPKDGERSIVLVSDGED
TCAPPPVCEVAKDLKKEGIDLTINTVGFLVDSKARKELECIAEAGGGEYMDAKDTVSLADSMKRLTTRTAQTTETEAEEI
SGGDDYSSAAKVPADVETFSTKLREKSGGDRADEDGAEYFSTPIAEGERLALSVATMPPPSQGDGLGKSNFALKLDAEEL
DCYLDNSGDTGIIDSNGPFFSSYTTKRAGEDCPAGDFKFKVVRKSGPYEGQEIPAEVTIKRFANEDLNGVPEPFEEESFS
HEDSPQAAEDVETVKPGAWFHDAAELKADGKSTVKAEIVPGETHVFKIKAEYGQKLRGGMKLVAAPDKELARISQLQVRT
LNSARQAASSQESQSVSPPTEGQSVAFGHAARLNYRNMVGDGEEQPSDVAARKSWLDGDQYIVVFFNNSWGGGEHRDVSE
VKNEVATYELTTELTGEKIPGPKFSEASHPQDEDSEDNSKQAAESEEKDNEESGSSNNLIWYSVVVGVLVALGGGGVALA
YSRKR

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ywmD [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002035 [H]

Pfam domain/function: PF00092 VWA [H]

EC number: NA

Molecular weight: Translated: 68905; Mature: 68774

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKRSSLLFAIALIAALVTIVVPPAQEARAEDEEGKNIPPTMLILDASGSMKTPDAGGQT
CCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC
RMAAAKDAAQLFSVAVPSDAELGFMVYGTEVGNSPEERDAGCKDVKTLLPVEKGNVTKIP
HHHHHHHHHHHHEEECCCCCCEEEEEEECCCCCCCHHHCCCHHHHHHHCCCCCCCEEECC
AEVGKVEASGHTPMGPALRQAAEELPKDGERSIVLVSDGEDTCAPPPVCEVAKDLKKEGI
HHHCEEECCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCC
DLTINTVGFLVDSKARKELECIAEAGGGEYMDAKDTVSLADSMKRLTTRTAQTTETEAEE
CEEEEEEEEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHH
ISGGDDYSSAAKVPADVETFSTKLREKSGGDRADEDGAEYFSTPIAEGERLALSVATMPP
CCCCCCCCHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCEEEEEEECCCC
PSQGDGLGKSNFALKLDAEELDCYLDNSGDTGIIDSNGPFFSSYTTKRAGEDCPAGDFKF
CCCCCCCCCCCEEEEEEHHHCEEEECCCCCEEEECCCCCEECCCCHHHCCCCCCCCCEEE
KVVRKSGPYEGQEIPAEVTIKRFANEDLNGVPEPFEEESFSHEDSPQAAEDVETVKPGAW
EEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHCCCCCC
FHDAAELKADGKSTVKAEIVPGETHVFKIKAEYGQKLRGGMKLVAAPDKELARISQLQVR
CCCHHHHCCCCCCCEEEEEECCCEEEEEEEHHHHHHHHCCEEEEECCCHHHHHHHHHHHH
TLNSARQAASSQESQSVSPPTEGQSVAFGHAARLNYRNMVGDGEEQPSDVAARKSWLDGD
HHHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHCCHHHCCCCCCCCCHHHHHHHHHCCCC
QYIVVFFNNSWGGGEHRDVSEVKNEVATYELTTELTGEKIPGPKFSEASHPQDEDSEDNS
CEEEEEEECCCCCCCCCCHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCH
KQAAESEEKDNEESGSSNNLIWYSVVVGVLVALGGGGVALAYSRKR
HHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHCCCCCEEEEEECCC
>Mature Secondary Structure 
AKRSSLLFAIALIAALVTIVVPPAQEARAEDEEGKNIPPTMLILDASGSMKTPDAGGQT
CCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC
RMAAAKDAAQLFSVAVPSDAELGFMVYGTEVGNSPEERDAGCKDVKTLLPVEKGNVTKIP
HHHHHHHHHHHHEEECCCCCCEEEEEEECCCCCCCHHHCCCHHHHHHHCCCCCCCEEECC
AEVGKVEASGHTPMGPALRQAAEELPKDGERSIVLVSDGEDTCAPPPVCEVAKDLKKEGI
HHHCEEECCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCC
DLTINTVGFLVDSKARKELECIAEAGGGEYMDAKDTVSLADSMKRLTTRTAQTTETEAEE
CEEEEEEEEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHH
ISGGDDYSSAAKVPADVETFSTKLREKSGGDRADEDGAEYFSTPIAEGERLALSVATMPP
CCCCCCCCHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCEEEEEEECCCC
PSQGDGLGKSNFALKLDAEELDCYLDNSGDTGIIDSNGPFFSSYTTKRAGEDCPAGDFKF
CCCCCCCCCCCEEEEEEHHHCEEEECCCCCEEEECCCCCEECCCCHHHCCCCCCCCCEEE
KVVRKSGPYEGQEIPAEVTIKRFANEDLNGVPEPFEEESFSHEDSPQAAEDVETVKPGAW
EEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHCCCCCC
FHDAAELKADGKSTVKAEIVPGETHVFKIKAEYGQKLRGGMKLVAAPDKELARISQLQVR
CCCHHHHCCCCCCCEEEEEECCCEEEEEEEHHHHHHHHCCEEEEECCCHHHHHHHHHHHH
TLNSARQAASSQESQSVSPPTEGQSVAFGHAARLNYRNMVGDGEEQPSDVAARKSWLDGD
HHHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHCCHHHCCCCCCCCCHHHHHHHHHCCCC
QYIVVFFNNSWGGGEHRDVSEVKNEVATYELTTELTGEKIPGPKFSEASHPQDEDSEDNS
CEEEEEEECCCCCCCCCCHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCH
KQAAESEEKDNEESGSSNNLIWYSVVVGVLVALGGGGVALAYSRKR
HHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]