| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is 66768275
Identifier: 66768275
GI number: 66768275
Start: 2359079
End: 2359588
Strand: Direct
Name: 66768275
Synonym: XC_1954
Alternate gene names: NA
Gene position: 2359079-2359588 (Clockwise)
Preceding gene: 66768274
Following gene: 66768276
Centisome position: 45.82
GC content: 66.08
Gene sequence:
>510_bases ATGGCGCAAGCACTGAGTAAGCTCGAACGCATCCCCAAGTTGAGCCGGTTCGGCTGGCTGATGGGGCTGTATGCGGAAAA CTTCCAGCACCTCACCCGGCTGTTCGCGCCGGCCGACCTCGCTCCGGGTTCGTATGTGTCCTCGATCGGCGACGGCCTGG ACCTGCGGCTGGACGTCATCGAATGCCACCGCTACACGGTGGAACTGCGGCTGACCTACGACCTGTGTGACCCGGTCACC GGCGAGCCGGACCCGTCCGCATACGTGCGCTTGTATCGGGATGCGCGCCAGGCCGAAACCACGCATTGCTACGTCGGCCG CCGCTGGCAGGACACCATGGGCATGTTCCCGCCGCCTGCCGAGCTCATCAGCCACCGCATGCGCATGAATACGTTCCTGG GCAAGTGGCTGGATTATCTGGCCGAGCGCGGCCATGGCGTCGCCACGCTGCGCTTGGACACCGACTACGTCGCGCCGCCG CGCGCCAATGCGCAGCCCGCTGTCAGCTGA
Upstream 100 bases:
>100_bases ACGTATTGAAGCGGGCGGGGCAGTGCTCCGCCAAGAGTGGCCCGGCCTTCGGCCGCCGTCAATGCTGCCCGTGCGGCAGC CCAGCGTGTAGGATCGATGC
Downstream 100 bases:
>100_bases TCGCTGCGCGGCGCGCAGCTTCGGTCATACTGATGTGCTTCGTGTCTGATCGTTCGCCATGCCGCATACCCCGATTGTCG CCACGCTCGGCTACCTGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MAQALSKLERIPKLSRFGWLMGLYAENFQHLTRLFAPADLAPGSYVSSIGDGLDLRLDVIECHRYTVELRLTYDLCDPVT GEPDPSAYVRLYRDARQAETTHCYVGRRWQDTMGMFPPPAELISHRMRMNTFLGKWLDYLAERGHGVATLRLDTDYVAPP RANAQPAVS
Sequences:
>Translated_169_residues MAQALSKLERIPKLSRFGWLMGLYAENFQHLTRLFAPADLAPGSYVSSIGDGLDLRLDVIECHRYTVELRLTYDLCDPVT GEPDPSAYVRLYRDARQAETTHCYVGRRWQDTMGMFPPPAELISHRMRMNTFLGKWLDYLAERGHGVATLRLDTDYVAPP RANAQPAVS >Mature_168_residues AQALSKLERIPKLSRFGWLMGLYAENFQHLTRLFAPADLAPGSYVSSIGDGLDLRLDVIECHRYTVELRLTYDLCDPVTG EPDPSAYVRLYRDARQAETTHCYVGRRWQDTMGMFPPPAELISHRMRMNTFLGKWLDYLAERGHGVATLRLDTDYVAPPR ANAQPAVS
Specific function: Unknown
COG id: COG3151
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19203; Mature: 19072
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQALSKLERIPKLSRFGWLMGLYAENFQHLTRLFAPADLAPGSYVSSIGDGLDLRLDVI CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEEEE ECHRYTVELRLTYDLCDPVTGEPDPSAYVRLYRDARQAETTHCYVGRRWQDTMGMFPPPA EECEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHCCCCCCHH ELISHRMRMNTFLGKWLDYLAERGHGVATLRLDTDYVAPPRANAQPAVS HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure AQALSKLERIPKLSRFGWLMGLYAENFQHLTRLFAPADLAPGSYVSSIGDGLDLRLDVI HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEEEE ECHRYTVELRLTYDLCDPVTGEPDPSAYVRLYRDARQAETTHCYVGRRWQDTMGMFPPPA EECEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHCCCCCCHH ELISHRMRMNTFLGKWLDYLAERGHGVATLRLDTDYVAPPRANAQPAVS HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA