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The map label for this gene is ccmC [H]

Identifier: 66768217

GI number: 66768217

Start: 2291950

End: 2292699

Strand: Reverse

Name: ccmC [H]

Synonym: XC_1896

Alternate gene names: 66768217

Gene position: 2292699-2291950 (Counterclockwise)

Preceding gene: 66768218

Following gene: 66768216

Centisome position: 44.53

GC content: 66.0

Gene sequence:

>750_bases
ATGAACGTCGTCGCCCGCTGGTTCCACCACGTTGCTTCCCCGCCGATCTTCGACCGTTTTACCGCGCGCTGGGCGCCGTG
GTGCTATGCGCTGGCGGCGGTATTGCTGGGCATCGGCATCTGGCAGGCATTATTCGCGGTGCCGGCCGACTACCAGCAGG
GCGACAGCTTCCGCATCCTGTATATCCACGTGCCCAGCGCATGGATGAGCCTGTTCGTGTTCGGGCTGATGGCGCTGTAC
GCGGCCATCGCGCTGATCTGGCGCATCAAGGTGTGCGAGATCCTGGCCATGGCCTGCGCGCCGATCGGCGCCGCCTTTAC
CGTGATCACCCTGCTCACCGGCAGCATCTGGGGCAAGCCGATGTGGGGCGCCTGGTGGGACTGGGACCCGCGCCTGACCA
CCGAATTGATCCTGCTGTTTCTGTACCTGGGCGTGATCGGGCTGTATCACGCCATCGACGACCGCCGTCAGGCCGCGCGG
GCCGCGAGCCTGCTGGCAATCGTCGGCGTTGCGTTGCTGCCGGTGATCCGCTATTCGGTGGTGTGGTGGAATTCGCTGCA
CCAGGGCCAGAGCATCCGTCTGCTGGGCCCGTCCAGTATCGATGCCAGCATGCTGCTGCCGCTGTGGCTGATGGTGATCG
GCACCAAGTTCTGGTTTGCCGGCTCGCTGCTCACGCGGGCGCGTGCCGACAACCTGCGCCGCGAAGCCGGCAAGGCGTGG
ATCGTGCGCGATGCGGAGGGCACGGCATGA

Upstream 100 bases:

>100_bases
GCGATCCGTATTTCACTGAGCTGACCAATGCAGTCGATGCGGCGTTGATGCGACACTCCGCTCCGCGAGCAATTGTCATA
CCGAGAGCCATCGCCATCGC

Downstream 100 bases:

>100_bases
ATTATCTGCCCTATGTGATTGCGGCCTACGCGGTGTTCGCGCTGGTGCTGCTGTGGGATTTGATCGCCGGCCGCTGGCAG
GTGCGCAAAGCCTTGAAAGT

Product: ABC transporter heme permease

Products: NA

Alternate protein names: Cytochrome c-type biogenesis protein CcmC [H]

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MNVVARWFHHVASPPIFDRFTARWAPWCYALAAVLLGIGIWQALFAVPADYQQGDSFRILYIHVPSAWMSLFVFGLMALY
AAIALIWRIKVCEILAMACAPIGAAFTVITLLTGSIWGKPMWGAWWDWDPRLTTELILLFLYLGVIGLYHAIDDRRQAAR
AASLLAIVGVALLPVIRYSVVWWNSLHQGQSIRLLGPSSIDASMLLPLWLMVIGTKFWFAGSLLTRARADNLRREAGKAW
IVRDAEGTA

Sequences:

>Translated_249_residues
MNVVARWFHHVASPPIFDRFTARWAPWCYALAAVLLGIGIWQALFAVPADYQQGDSFRILYIHVPSAWMSLFVFGLMALY
AAIALIWRIKVCEILAMACAPIGAAFTVITLLTGSIWGKPMWGAWWDWDPRLTTELILLFLYLGVIGLYHAIDDRRQAAR
AASLLAIVGVALLPVIRYSVVWWNSLHQGQSIRLLGPSSIDASMLLPLWLMVIGTKFWFAGSLLTRARADNLRREAGKAW
IVRDAEGTA
>Mature_249_residues
MNVVARWFHHVASPPIFDRFTARWAPWCYALAAVLLGIGIWQALFAVPADYQQGDSFRILYIHVPSAWMSLFVFGLMALY
AAIALIWRIKVCEILAMACAPIGAAFTVITLLTGSIWGKPMWGAWWDWDPRLTTELILLFLYLGVIGLYHAIDDRRQAAR
AASLLAIVGVALLPVIRYSVVWWNSLHQGQSIRLLGPSSIDASMLLPLWLMVIGTKFWFAGSLLTRARADNLRREAGKAW
IVRDAEGTA

Specific function: Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmC/CycZ/HelC family [H]

Homologues:

Organism=Escherichia coli, GI1788527, Length=235, Percent_Identity=49.3617021276596, Blast_Score=205, Evalue=2e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR003557 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 27897; Mature: 27897

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVVARWFHHVASPPIFDRFTARWAPWCYALAAVLLGIGIWQALFAVPADYQQGDSFRIL
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
YIHVPSAWMSLFVFGLMALYAAIALIWRIKVCEILAMACAPIGAAFTVITLLTGSIWGKP
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
MWGAWWDWDPRLTTELILLFLYLGVIGLYHAIDDRRQAARAASLLAIVGVALLPVIRYSV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VWWNSLHQGQSIRLLGPSSIDASMLLPLWLMVIGTKFWFAGSLLTRARADNLRREAGKAW
HHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
IVRDAEGTA
EEECCCCCC
>Mature Secondary Structure
MNVVARWFHHVASPPIFDRFTARWAPWCYALAAVLLGIGIWQALFAVPADYQQGDSFRIL
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
YIHVPSAWMSLFVFGLMALYAAIALIWRIKVCEILAMACAPIGAAFTVITLLTGSIWGKP
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
MWGAWWDWDPRLTTELILLFLYLGVIGLYHAIDDRRQAARAASLLAIVGVALLPVIRYSV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VWWNSLHQGQSIRLLGPSSIDASMLLPLWLMVIGTKFWFAGSLLTRARADNLRREAGKAW
HHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
IVRDAEGTA
EEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]