| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is yidD [C]
Identifier: 66768180
GI number: 66768180
Start: 2255905
End: 2256186
Strand: Reverse
Name: yidD [C]
Synonym: XC_1859
Alternate gene names: 66768180
Gene position: 2256186-2255905 (Counterclockwise)
Preceding gene: 66768186
Following gene: 66768179
Centisome position: 43.82
GC content: 65.96
Gene sequence:
>282_bases GTGGCATATCATTGGCAAGTGATCGGACGCCTGCTCATCGCGCTGCTGCGCTTCTACAAGCGGTTCATCAGCCCCCTGCT GGGACCGCGCTGCCGTTTTGCGCCCAGCTGCTCGGAGTATGCGATGACTGCCATCGCCCGCTTCGGTCCGCTCCGCGGCA GCTGGCTGGCTGCACGCCGCTTGGGCCGCTGCCATCCGTTCCATCCGGGCGGGTTCGACCCCGTTCCCGATGCGCCCACA TCTTCCCCCTCTTCCTGCCGCTGCAAAGGACCCCATCCATGA
Upstream 100 bases:
>100_bases TAGCAGCCACGAAACGCTCTTCCTTGGTTCCCCCGGGGCCCGGGAAAGCGGGCCTTTATAGCCTACCCCACAGACCCCCG GCAACCACGTATTAATCCAA
Downstream 100 bases:
>100_bases GCCGAACCGTCATCGTCAACGCCCGCCTGGTCAATGAAGGCAAGGAGTTCGACGCCGATCTCCTGATCGAAGGCGGCCGC ATCGCCCGCATCGACAGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MAYHWQVIGRLLIALLRFYKRFISPLLGPRCRFAPSCSEYAMTAIARFGPLRGSWLAARRLGRCHPFHPGGFDPVPDAPT SSPSSCRCKGPHP
Sequences:
>Translated_93_residues MAYHWQVIGRLLIALLRFYKRFISPLLGPRCRFAPSCSEYAMTAIARFGPLRGSWLAARRLGRCHPFHPGGFDPVPDAPT SSPSSCRCKGPHP >Mature_92_residues AYHWQVIGRLLIALLRFYKRFISPLLGPRCRFAPSCSEYAMTAIARFGPLRGSWLAARRLGRCHPFHPGGFDPVPDAPTS SPSSCRCKGPHP
Specific function: Unknown
COG id: COG0759
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0161 family [H]
Homologues:
Organism=Escherichia coli, GI87082322, Length=73, Percent_Identity=58.9041095890411, Blast_Score=99, Evalue=7e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002696 - ProDom: PD004225 [H]
Pfam domain/function: PF01809 DUF37 [H]
EC number: NA
Molecular weight: Translated: 10381; Mature: 10250
Theoretical pI: Translated: 10.92; Mature: 10.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 5.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYHWQVIGRLLIALLRFYKRFISPLLGPRCRFAPSCSEYAMTAIARFGPLRGSWLAARR CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH LGRCHPFHPGGFDPVPDAPTSSPSSCRCKGPHP HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AYHWQVIGRLLIALLRFYKRFISPLLGPRCRFAPSCSEYAMTAIARFGPLRGSWLAARR CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH LGRCHPFHPGGFDPVPDAPTSSPSSCRCKGPHP HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA