| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is ybaP [C]
Identifier: 66768140
GI number: 66768140
Start: 2212278
End: 2213243
Strand: Direct
Name: ybaP [C]
Synonym: XC_1819
Alternate gene names: 66768140
Gene position: 2212278-2213243 (Clockwise)
Preceding gene: 66768139
Following gene: 66768144
Centisome position: 42.97
GC content: 67.81
Gene sequence:
>966_bases ATGCGCTGGATGACACGGGCGCGTCGCGCGCTGCTGCCCGCCTGCGCCGGCCTGCTGGCGATCGCTGCGTTGTGGGGCGG CACAGCGGCTGCCGCCTCGGCACCTGGCATCGCTGCTGCCGCCAGCCCGCCGGTGCCGCTGCTGTGGAAGGTCGATGGCA AGGGCGGCACCCTGTATCTGCTTGGTTCGTTCCATCTGCTCAAGCCCGACGACTACCCGCTGTCACCGGATGTGCTGCAG GCCTTTGCGCAGGCCGACCGGCTCACCTTCGAACTGCCACCGGCCGATGTGCAGTCGCCCGAATTGGCGGCCAAGATGCT GCGTGCCGCCCGCCGCAGCGATGGCAAGCGCCTGCAGGATGCACTCGAAGCCCCAACCTGGCAGGCGCTCGCCACGCAGG CGCGCAAGCACGGCATCCCGCTGGAGAGCCTGCAGCCGATGAAACCGTGGTTTGTCGCCCTGACGCTCAGCCTGGCCGAG ATGCGACGCCAGGGCATGCAGGCCGATGCAGGGCTGGACAATTACCTGATGCAGCTGGCGCAGGCACGTGGCAAACCGGC CGATGGCCTGGAGCGCGCGGACGAACAGATCGCCCTGCTCGACAGCATGACTGCGACCGAACAACAGCAACTGCTGGCCG AAACCCTCGATGAGGCCGGTGCCGCCGATCAGGTCAATGCGCTGCACGATGCCTGGCGCCGTGGTGACGTCCATCTGCTG ACCACGCAAATGGCCGAAGACATGCGCAAGCAGTATCCCGCGCTGTATCAAGACATCAACGTGGAGCGCAATGCGCGCTG GGTGCCGCGTCTGGAGCAGCGGCTGGGCAAGCAGGGCGGCACTACGCTGGTGGTGGTCGGTGCCTTGCACCTGCTGGGTC GCGACGGGGTGGTGGAGCGTCTGCGTGCACGCGGGTATCGCGTGGAGCGGATCTGCAAGGCCTGCGCGGAGCAGGCTGGC CACTGA
Upstream 100 bases:
>100_bases GCGCGTTCACGCCGTTTGCGACCTGCCCGTTGCCACCGCCGGAAAATCGCATCGACCTGGCCGTATCGGCGGGCGAAAAA GCCTACAAGGCAGCGCATTG
Downstream 100 bases:
>100_bases TGTGATGACGGGCGCGGCGCAGGTTGCGCCACGCCAGTCAGGGCTTAGCCGCGGTTGCGGGCCTTGCCGGTGGTGCCGGT CGCGTTGCTGCTGCTGGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: GumN Protein; Gumn Family Protein; SLA2 Protein; GumN-Family Protein; Lipoprotein; GumN Protein Superfamily; Secreted Protein
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MRWMTRARRALLPACAGLLAIAALWGGTAAAASAPGIAAAASPPVPLLWKVDGKGGTLYLLGSFHLLKPDDYPLSPDVLQ AFAQADRLTFELPPADVQSPELAAKMLRAARRSDGKRLQDALEAPTWQALATQARKHGIPLESLQPMKPWFVALTLSLAE MRRQGMQADAGLDNYLMQLAQARGKPADGLERADEQIALLDSMTATEQQQLLAETLDEAGAADQVNALHDAWRRGDVHLL TTQMAEDMRKQYPALYQDINVERNARWVPRLEQRLGKQGGTTLVVVGALHLLGRDGVVERLRARGYRVERICKACAEQAG H
Sequences:
>Translated_321_residues MRWMTRARRALLPACAGLLAIAALWGGTAAAASAPGIAAAASPPVPLLWKVDGKGGTLYLLGSFHLLKPDDYPLSPDVLQ AFAQADRLTFELPPADVQSPELAAKMLRAARRSDGKRLQDALEAPTWQALATQARKHGIPLESLQPMKPWFVALTLSLAE MRRQGMQADAGLDNYLMQLAQARGKPADGLERADEQIALLDSMTATEQQQLLAETLDEAGAADQVNALHDAWRRGDVHLL TTQMAEDMRKQYPALYQDINVERNARWVPRLEQRLGKQGGTTLVVVGALHLLGRDGVVERLRARGYRVERICKACAEQAG H >Mature_321_residues MRWMTRARRALLPACAGLLAIAALWGGTAAAASAPGIAAAASPPVPLLWKVDGKGGTLYLLGSFHLLKPDDYPLSPDVLQ AFAQADRLTFELPPADVQSPELAAKMLRAARRSDGKRLQDALEAPTWQALATQARKHGIPLESLQPMKPWFVALTLSLAE MRRQGMQADAGLDNYLMQLAQARGKPADGLERADEQIALLDSMTATEQQQLLAETLDEAGAADQVNALHDAWRRGDVHLL TTQMAEDMRKQYPALYQDINVERNARWVPRLEQRLGKQGGTTLVVVGALHLLGRDGVVERLRARGYRVERICKACAEQAG H
Specific function: Unknown
COG id: COG3735
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35059; Mature: 35059
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWMTRARRALLPACAGLLAIAALWGGTAAAASAPGIAAAASPPVPLLWKVDGKGGTLYL CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEEE LGSFHLLKPDDYPLSPDVLQAFAQADRLTFELPPADVQSPELAAKMLRAARRSDGKRLQD EECEEEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHH ALEAPTWQALATQARKHGIPLESLQPMKPWFVALTLSLAEMRRQGMQADAGLDNYLMQLA HHCCCHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH QARGKPADGLERADEQIALLDSMTATEQQQLLAETLDEAGAADQVNALHDAWRRGDVHLL HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEH TTQMAEDMRKQYPALYQDINVERNARWVPRLEQRLGKQGGTTLVVVGALHLLGRDGVVER HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEHHHHHHHHHCCCHHHHH LRARGYRVERICKACAEQAGH HHHCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MRWMTRARRALLPACAGLLAIAALWGGTAAAASAPGIAAAASPPVPLLWKVDGKGGTLYL CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEEE LGSFHLLKPDDYPLSPDVLQAFAQADRLTFELPPADVQSPELAAKMLRAARRSDGKRLQD EECEEEECCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHH ALEAPTWQALATQARKHGIPLESLQPMKPWFVALTLSLAEMRRQGMQADAGLDNYLMQLA HHCCCHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH QARGKPADGLERADEQIALLDSMTATEQQQLLAETLDEAGAADQVNALHDAWRRGDVHLL HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEH TTQMAEDMRKQYPALYQDINVERNARWVPRLEQRLGKQGGTTLVVVGALHLLGRDGVVER HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEHHHHHHHHHCCCHHHHH LRARGYRVERICKACAEQAGH HHHCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA