| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
Click here to switch to the map view.
The map label for this gene is 66768063
Identifier: 66768063
GI number: 66768063
Start: 2104179
End: 2105309
Strand: Reverse
Name: 66768063
Synonym: XC_1740
Alternate gene names: NA
Gene position: 2105309-2104179 (Counterclockwise)
Preceding gene: 66768064
Following gene: 66768056
Centisome position: 40.89
GC content: 60.65
Gene sequence:
>1131_bases GTGATCAGCAGTCGCGTACTGACCACCTTCACCAGCACTCAGATCGCCAAGCAACTGGGCACACAGAGCGATGCGCCGCC GCCGCGCTGCAACGTCAGCGTGGCGGAAATCGTCTACGCCACCGTCGGCGTCCATAACGAACCCACCACCGCCTCCGCTG CCGTCCTGATCCCCTCCGGCATCAACTGTACGACGTCGTATCCATTGCTGGGATGGGGACAGGGCGCGCAGTTGCAGAGG GCCAGCTCACAGGCACAAGGGTTCCGCGCATCGCGCGGCAACCACGAGGTGATCAGCCAATTTGCGGCACAAGGCTATGC GGTCGTGGCCACCGACTATCTGGGTATTGGCAAGTCGACCTATCCCTTCGCGCCCCATCTTCAAGCTGCCCCTGAAGCCA GCGCCATCGTGGACGCGCTACGCGCCGCGCGTGTCCTGCTTGCACAGCAGCATGCGCCGCTTTCGGGCAAGGTCATGCTC TCCGGTTTTTCCAGTGGTGCCCACGCCGTGATGGCTGCCCAACGCGAGATCGAGCTGCACCTGTCCAGCGAATTCAACCT GGTCGCAAGTGGTCCTATCTCCGGGCCCTATTCCCTCTCCAAGACCGTGCTGAAAAACTGGGGCGGCCCCAAGGCCGAGG GACTCAACACGCTCACGCTCGTACTCAACACCTTTACCTTGATCGGCATGCAGCACACCTACTCCAATCTCTACACGACA CCCATGCAGGTGTTTCAGCAGCCATTGGCGAACAAGGTCGAGAGTCTGTTCCCCGGGAAATTCGATGCGATCACGCTTGG GCTCGAACAACTGACCGACGTCAAGGACGTGTTTCAGCCGGAGTTCGCGCGCGATGTCGTCAGCAACGCCAAAAACGCAT TCATCAAAGACCTCATGCGCAACGATCTGGTCAATTGGACCCCGCGCACGCCCACCTTGCTGTGCGGGGTGCAGGACGAC AATGTGGTGCCATTCAGCGTTGCGCAAGAGGCGCTGGCCGACTTCAAGCGCAATGGCAGCAATCAGGTGAAACTCGTTCC CGTGACATCTGGCGCATTTTTTCCACACGGTGCCAGCAAGGCGCCCTGCATGGCTGCAGTGCGCACCCAGCTGTTGGACA AGCAGCGTTGA
Upstream 100 bases:
>100_bases CATGAAACTGCGCGCTTCTAGCTCCAACCCAAACCGTCTGGCGCTACTGCCCCTCCTGGCACTGCCCTGTATGGCAACCG CAGCAACGCAGCGCGGTGAC
Downstream 100 bases:
>100_bases ACATACCGCGCGTGCAACCTGCGGTTGGAGGAAGGAACGCGCGTCCACGCACGAGCGATGATCCAGTACCGGGCACGCGC AAGCGCGGTCCTTCGGGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 376; Mature: 376
Protein sequence:
>376_residues MISSRVLTTFTSTQIAKQLGTQSDAPPPRCNVSVAEIVYATVGVHNEPTTASAAVLIPSGINCTTSYPLLGWGQGAQLQR ASSQAQGFRASRGNHEVISQFAAQGYAVVATDYLGIGKSTYPFAPHLQAAPEASAIVDALRAARVLLAQQHAPLSGKVML SGFSSGAHAVMAAQREIELHLSSEFNLVASGPISGPYSLSKTVLKNWGGPKAEGLNTLTLVLNTFTLIGMQHTYSNLYTT PMQVFQQPLANKVESLFPGKFDAITLGLEQLTDVKDVFQPEFARDVVSNAKNAFIKDLMRNDLVNWTPRTPTLLCGVQDD NVVPFSVAQEALADFKRNGSNQVKLVPVTSGAFFPHGASKAPCMAAVRTQLLDKQR
Sequences:
>Translated_376_residues MISSRVLTTFTSTQIAKQLGTQSDAPPPRCNVSVAEIVYATVGVHNEPTTASAAVLIPSGINCTTSYPLLGWGQGAQLQR ASSQAQGFRASRGNHEVISQFAAQGYAVVATDYLGIGKSTYPFAPHLQAAPEASAIVDALRAARVLLAQQHAPLSGKVML SGFSSGAHAVMAAQREIELHLSSEFNLVASGPISGPYSLSKTVLKNWGGPKAEGLNTLTLVLNTFTLIGMQHTYSNLYTT PMQVFQQPLANKVESLFPGKFDAITLGLEQLTDVKDVFQPEFARDVVSNAKNAFIKDLMRNDLVNWTPRTPTLLCGVQDD NVVPFSVAQEALADFKRNGSNQVKLVPVTSGAFFPHGASKAPCMAAVRTQLLDKQR >Mature_376_residues MISSRVLTTFTSTQIAKQLGTQSDAPPPRCNVSVAEIVYATVGVHNEPTTASAAVLIPSGINCTTSYPLLGWGQGAQLQR ASSQAQGFRASRGNHEVISQFAAQGYAVVATDYLGIGKSTYPFAPHLQAAPEASAIVDALRAARVLLAQQHAPLSGKVML SGFSSGAHAVMAAQREIELHLSSEFNLVASGPISGPYSLSKTVLKNWGGPKAEGLNTLTLVLNTFTLIGMQHTYSNLYTT PMQVFQQPLANKVESLFPGKFDAITLGLEQLTDVKDVFQPEFARDVVSNAKNAFIKDLMRNDLVNWTPRTPTLLCGVQDD NVVPFSVAQEALADFKRNGSNQVKLVPVTSGAFFPHGASKAPCMAAVRTQLLDKQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40214; Mature: 40214
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISSRVLTTFTSTQIAKQLGTQSDAPPPRCNVSVAEIVYATVGVHNEPTTASAAVLIPSG CCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCC INCTTSYPLLGWGQGAQLQRASSQAQGFRASRGNHEVISQFAAQGYAVVATDYLGIGKST CCCCCCCCCEECCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCEEEEEEEHHCCCCCC YPFAPHLQAAPEASAIVDALRAARVLLAQQHAPLSGKVMLSGFSSGAHAVMAAQREIELH CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHEEEEE LSSEFNLVASGPISGPYSLSKTVLKNWGGPKAEGLNTLTLVLNTFTLIGMQHTYSNLYTT ECCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH PMQVFQQPLANKVESLFPGKFDAITLGLEQLTDVKDVFQPEFARDVVSNAKNAFIKDLMR HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH NDLVNWTPRTPTLLCGVQDDNVVPFSVAQEALADFKRNGSNQVKLVPVTSGAFFPHGASK CCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCC APCMAAVRTQLLDKQR CHHHHHHHHHHHHCCC >Mature Secondary Structure MISSRVLTTFTSTQIAKQLGTQSDAPPPRCNVSVAEIVYATVGVHNEPTTASAAVLIPSG CCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCC INCTTSYPLLGWGQGAQLQRASSQAQGFRASRGNHEVISQFAAQGYAVVATDYLGIGKST CCCCCCCCCEECCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCEEEEEEEHHCCCCCC YPFAPHLQAAPEASAIVDALRAARVLLAQQHAPLSGKVMLSGFSSGAHAVMAAQREIELH CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHEEEEE LSSEFNLVASGPISGPYSLSKTVLKNWGGPKAEGLNTLTLVLNTFTLIGMQHTYSNLYTT ECCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH PMQVFQQPLANKVESLFPGKFDAITLGLEQLTDVKDVFQPEFARDVVSNAKNAFIKDLMR HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH NDLVNWTPRTPTLLCGVQDDNVVPFSVAQEALADFKRNGSNQVKLVPVTSGAFFPHGASK CCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCC APCMAAVRTQLLDKQR CHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA