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The map label for this gene is xsa [H]

Identifier: 66768038

GI number: 66768038

Start: 2067310

End: 2068821

Strand: Direct

Name: xsa [H]

Synonym: XC_1714

Alternate gene names: 66768038

Gene position: 2067310-2068821 (Clockwise)

Preceding gene: 66768037

Following gene: 66768039

Centisome position: 40.15

GC content: 68.12

Gene sequence:

>1512_bases
GTGCCAGCGCAGCCCGTGCAGTTGCACGCGCCGGGCAACCCGATCCTGGCCGACGGCAGCACGTATTCGGCCGACCCGGC
GCCGCTGGTGGCCGATGGCAAGCTCTACATCCTGGCCGGGCGCGACACCGCGCCCCCGGAGCGCAACGACTTCGTCATGC
CGGGCTGGCAATTGTTTGTGACCGGCGACCCCGAACGCGGCAACTGGAGCCACTACCGCGACTTTTTGCGCCCGCACGCC
GTGTTCGCCTGGGCCGGCAAACGCCACGCCTATGCAGCGCAGATCGTGCAAGGGCCCGATCGCCGCTACTACCTGTATGC
GCCAGTGCAGCAGCGCAACGCGTCCAGTGCCGATCCATTCGGCATCGGCGTGGCGGTGGCCGACAGCCCACTCGGTCCGT
GGACCGATGCACATCCACAGGGGCCGATCGTGTCGCAGTCGGTGCCCACGCCCAACACCATCCAGAACATCGATCCCACC
GTGCTGGTGGATGACGACGGCCGCGTGTATCTGTACTGGGGCACCTTCGGCGCGCTGTACGGCGTGGAGCTGCAGCGCGA
CATGGTCAGCTTCAAGGGCACGCCGGTGGCGGTGGACACGCTGGGCGGCTATTTCGAGGCGCCCTGGTTGTTCAAGCGCA
AGGGCACCTACTACCTGGCATATGCCGCCAACAATGCCGGGCGCGGCTCGGCATGCACGCCAACGCAGTATCACGCGTGC
ATCGCGTATGCGAGCGCGCCCACGCCACTGGGGCCGTGGACGTATCGCGGCATCGTGCTGCCACCGGTGAGTTCGACCAC
CTCCCATCCGGGCATCGTCGCCTTTGCCGGCCAGTGGTATCTGGTCTACCACACCGCCGATGCCGCCGGCGGTGGGCATT
TCCGTCGCAGCGTGGCGATCGATCGCCTGCAATGGGACGACGGCACGCAGCCGGCCAGCATCCGCACCATCACGCCGACG
CGGCGCCCGCAACCGCCGATGCAGCCGCAGCGCAACCAAGCGCCAGCCGCCTACGCCAGCGCCTCCAACGGCCCGGATAT
TCCCGTGCAGTACTGGATGGCAGCGCTCAACGACGGCATCGTCAAAGCGAATCCGCTGCCGCCACAGCTGTGGGGCAGCT
GGATGCCAGACAACCCGCCGCAGCAATGGATTCAGTACAGCTGGGCACAGCTGGTGACGCTGGACCGCACCCGCATCGTG
TTCTGGGCCGACCAACCGACGGGCGCGCAGATCGGCGTGGCGCCACCGGCGCGCTGGCATCTGGAATATCGCCAGGGTGG
GCACTGGGTGCCTGTGCAGGCCAGTGACCGCTATGGCACACGGACCGGGCGCTATGAGGCTGTGTCGTTCTCACCGGTGA
CCACGCGTTGCGTGCGTGCGGTGTTCGATGCGTCCGGTTCCGGCCCCAGCTACGCCGCCTTCGCCGTGCAGGAGTGGGAA
GTACTGGCACCGCAGCCGCAGCAACTGCCCGCCGCCACGGACGCCGACAGCCGCCACTGCGATGCGCCGTGA

Upstream 100 bases:

>100_bases
AGGCGGCCACGCCATGAAGTGGAGCGTTATGTGCGCGCGTGCGTGCGCACGCATCTTCGCGACGACCTTGTGGTTGGTCA
GTGTTCCGGCATGCGCGGCA

Downstream 100 bases:

>100_bases
TTGCGCTGACGACAACGCAACCGCTGCCTACATTTCTCTCCACCCATCACCGGCTTTCTCACCTGGATCGACCCATGCTC
CTGCAGTTGCAACGTCCCGC

Product: xylosidase/arabinosidase

Products: NA

Alternate protein names: Beta-xylosidase; 1,4-beta-D-xylan xylohydrolase; Xylan 1,4-beta-xylosidase; Alpha-N-arabinofuranosidase; Arabinosidase [H]

Number of amino acids: Translated: 503; Mature: 502

Protein sequence:

>503_residues
MPAQPVQLHAPGNPILADGSTYSADPAPLVADGKLYILAGRDTAPPERNDFVMPGWQLFVTGDPERGNWSHYRDFLRPHA
VFAWAGKRHAYAAQIVQGPDRRYYLYAPVQQRNASSADPFGIGVAVADSPLGPWTDAHPQGPIVSQSVPTPNTIQNIDPT
VLVDDDGRVYLYWGTFGALYGVELQRDMVSFKGTPVAVDTLGGYFEAPWLFKRKGTYYLAYAANNAGRGSACTPTQYHAC
IAYASAPTPLGPWTYRGIVLPPVSSTTSHPGIVAFAGQWYLVYHTADAAGGGHFRRSVAIDRLQWDDGTQPASIRTITPT
RRPQPPMQPQRNQAPAAYASASNGPDIPVQYWMAALNDGIVKANPLPPQLWGSWMPDNPPQQWIQYSWAQLVTLDRTRIV
FWADQPTGAQIGVAPPARWHLEYRQGGHWVPVQASDRYGTRTGRYEAVSFSPVTTRCVRAVFDASGSGPSYAAFAVQEWE
VLAPQPQQLPAATDADSRHCDAP

Sequences:

>Translated_503_residues
MPAQPVQLHAPGNPILADGSTYSADPAPLVADGKLYILAGRDTAPPERNDFVMPGWQLFVTGDPERGNWSHYRDFLRPHA
VFAWAGKRHAYAAQIVQGPDRRYYLYAPVQQRNASSADPFGIGVAVADSPLGPWTDAHPQGPIVSQSVPTPNTIQNIDPT
VLVDDDGRVYLYWGTFGALYGVELQRDMVSFKGTPVAVDTLGGYFEAPWLFKRKGTYYLAYAANNAGRGSACTPTQYHAC
IAYASAPTPLGPWTYRGIVLPPVSSTTSHPGIVAFAGQWYLVYHTADAAGGGHFRRSVAIDRLQWDDGTQPASIRTITPT
RRPQPPMQPQRNQAPAAYASASNGPDIPVQYWMAALNDGIVKANPLPPQLWGSWMPDNPPQQWIQYSWAQLVTLDRTRIV
FWADQPTGAQIGVAPPARWHLEYRQGGHWVPVQASDRYGTRTGRYEAVSFSPVTTRCVRAVFDASGSGPSYAAFAVQEWE
VLAPQPQQLPAATDADSRHCDAP
>Mature_502_residues
PAQPVQLHAPGNPILADGSTYSADPAPLVADGKLYILAGRDTAPPERNDFVMPGWQLFVTGDPERGNWSHYRDFLRPHAV
FAWAGKRHAYAAQIVQGPDRRYYLYAPVQQRNASSADPFGIGVAVADSPLGPWTDAHPQGPIVSQSVPTPNTIQNIDPTV
LVDDDGRVYLYWGTFGALYGVELQRDMVSFKGTPVAVDTLGGYFEAPWLFKRKGTYYLAYAANNAGRGSACTPTQYHACI
AYASAPTPLGPWTYRGIVLPPVSSTTSHPGIVAFAGQWYLVYHTADAAGGGHFRRSVAIDRLQWDDGTQPASIRTITPTR
RPQPPMQPQRNQAPAAYASASNGPDIPVQYWMAALNDGIVKANPLPPQLWGSWMPDNPPQQWIQYSWAQLVTLDRTRIVF
WADQPTGAQIGVAPPARWHLEYRQGGHWVPVQASDRYGTRTGRYEAVSFSPVTTRCVRAVFDASGSGPSYAAFAVQEWEV
LAPQPQQLPAATDADSRHCDAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 43 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006710 [H]

Pfam domain/function: PF04616 Glyco_hydro_43 [H]

EC number: =3.2.1.37; =3.2.1.55 [H]

Molecular weight: Translated: 55034; Mature: 54903

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAQPVQLHAPGNPILADGSTYSADPAPLVADGKLYILAGRDTAPPERNDFVMPGWQLFV
CCCCCEEEECCCCCEEECCCCCCCCCCCEEECCEEEEEECCCCCCCCCCCEECCCEEEEE
TGDPERGNWSHYRDFLRPHAVFAWAGKRHAYAAQIVQGPDRRYYLYAPVQQRNASSADPF
ECCCCCCCHHHHHHHHCCCEEEEECCCCCCEEEHHHCCCCCEEEEECCHHHCCCCCCCCC
GIGVAVADSPLGPWTDAHPQGPIVSQSVPTPNTIQNIDPTVLVDDDGRVYLYWGTFGALY
EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEECCCCEEEEEECCCCCEE
GVELQRDMVSFKGTPVAVDTLGGYFEAPWLFKRKGTYYLAYAANNAGRGSACTPTQYHAC
EEEEHHHHHHHCCCCEEEECCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCCEEE
IAYASAPTPLGPWTYRGIVLPPVSSTTSHPGIVAFAGQWYLVYHTADAAGGGHFRRSVAI
EEEECCCCCCCCCEECCEEECCCCCCCCCCCEEEEECCEEEEEEECCCCCCCCEEEEEEE
DRLQWDDGTQPASIRTITPTRRPQPPMQPQRNQAPAAYASASNGPDIPVQYWMAALNDGI
EEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCC
VKANPLPPQLWGSWMPDNPPQQWIQYSWAQLVTLDRTRIVFWADQPTGAQIGVAPPARWH
EECCCCCHHHCCCCCCCCCHHHHHHHCCCEEEEECCEEEEEEECCCCCCEEECCCCCEEE
LEYRQGGHWVPVQASDRYGTRTGRYEAVSFSPVTTRCVRAVFDASGSGPSYAAFAVQEWE
EEECCCCEEEEEECCCCCCCCCCCEEEEEECHHHHHHHHHHHCCCCCCCCEEEEEEEECE
VLAPQPQQLPAATDADSRHCDAP
EECCCHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PAQPVQLHAPGNPILADGSTYSADPAPLVADGKLYILAGRDTAPPERNDFVMPGWQLFV
CCCCEEEECCCCCEEECCCCCCCCCCCEEECCEEEEEECCCCCCCCCCCEECCCEEEEE
TGDPERGNWSHYRDFLRPHAVFAWAGKRHAYAAQIVQGPDRRYYLYAPVQQRNASSADPF
ECCCCCCCHHHHHHHHCCCEEEEECCCCCCEEEHHHCCCCCEEEEECCHHHCCCCCCCCC
GIGVAVADSPLGPWTDAHPQGPIVSQSVPTPNTIQNIDPTVLVDDDGRVYLYWGTFGALY
EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEECCCCEEEEEECCCCCEE
GVELQRDMVSFKGTPVAVDTLGGYFEAPWLFKRKGTYYLAYAANNAGRGSACTPTQYHAC
EEEEHHHHHHHCCCCEEEECCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCCEEE
IAYASAPTPLGPWTYRGIVLPPVSSTTSHPGIVAFAGQWYLVYHTADAAGGGHFRRSVAI
EEEECCCCCCCCCEECCEEECCCCCCCCCCCEEEEECCEEEEEEECCCCCCCCEEEEEEE
DRLQWDDGTQPASIRTITPTRRPQPPMQPQRNQAPAAYASASNGPDIPVQYWMAALNDGI
EEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCC
VKANPLPPQLWGSWMPDNPPQQWIQYSWAQLVTLDRTRIVFWADQPTGAQIGVAPPARWH
EECCCCCHHHCCCCCCCCCHHHHHHHCCCEEEEECCEEEEEEECCCCCCEEECCCCCEEE
LEYRQGGHWVPVQASDRYGTRTGRYEAVSFSPVTTRCVRAVFDASGSGPSYAAFAVQEWE
EEECCCCEEEEEECCCCCCCCCCCEEEEEECHHHHHHHHHHHCCCCCCCCEEEEEEEECE
VLAPQPQQLPAATDADSRHCDAP
EECCCHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7766665 [H]