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The map label for this gene is rng [H]

Identifier: 66767833

GI number: 66767833

Start: 1812735

End: 1814234

Strand: Direct

Name: rng [H]

Synonym: XC_1507

Alternate gene names: 66767833

Gene position: 1812735-1814234 (Clockwise)

Preceding gene: 66767832

Following gene: 66767834

Centisome position: 35.21

GC content: 65.33

Gene sequence:

>1500_bases
ATGTCGGAAGAGATCCTGGTCAACGTCACCCCCCGCGAAACCCGCGTGGCCGTGATCGAGAACGGCATGTTGCAAGAGCT
GCATATCGAACGTGGTTGGCGCCGCGGGGTGGTGGGCAATATCTACAAGGGCAAGGTGCAGCGGGTGATGCCCGGCATGC
AGGCTGCGTTCGTGGAAGTGGGCCTGGAGCGCGCCGCGTTCCTGCATGCCAACGACGTGGTGCGGCCGGCCCCGGCGCCA
GCGAGCGTGGTGGATACCGAAGAAACCCCGATCCCGCCGCCGCCGGCCGCCTCGGTGCCGATCGTGGAGCTGTTGCGCGA
CGGCCAGGACATCGTGGTGCAGGTGGTCAAGGACCCGATCGGCACCAAGGGCGCGCGGCTGACCACGCAGATCAGCATTC
CCTCGCGGTATCTGGTGCTGTTGCCGCAGTCCAAGGTGGTGGGTGTCTCGGCGCGAATCGAAGACGAGGCCGAGCGCCTG
CGCCTGAAGACCATCGTCAGCGAGGTCTCGGCCCAGCATGGCGGCTTCGGCTACATCATCCGCACCAATGCCGAGGGCCA
GCCGGCCGAAGCCCTGGCCGAAGACATCGCCTATCTGTCGCGGGTGTGGAACGTGGTCGAGCGGCGCGGCCGCGAGGCGT
CGGCGTGCAGCATCATTTACGAAGACCTGAGCCTGCCCCTGCGTGCGGTGCGCGACCTGATCCGCAAGGACGTGGAGAAG
GTCAAGGTCGACTCCAACGAGACGTTCGTGCAGCTGCAGGCCTTCGTGGCCAAGTACATGCCGGTGCTGGCCGAGCGGCT
GGAGCTGTACACCGGCGACCGCCCGATCTTCGATCTGTATGGCGTGGAAGACGAAATCGGCCGCGCGCTGGACAAGCAGG
TGCCGCTCAAGTCCGGCGGCTACCTGGTCATCGACCAGACTGAAGCGATGACCACCATCGACGTCAACACCGGTTCGTTC
GTCGGCCAGCGCAATCTGGAAGAAACCGTCTTCCGCACCAATCTGGAGGCGGCGCAGGCGGTGGCCCGGCAGCTGCGGCT
GCGTAACCTGGGCGGCATCATCATCATCGATTTCATCGACATGGATGATCCCGAGCATCGGCGCCAGGTGTTGCGCACGC
TGGAAAAGGCATTGGCCCGCGACCACGCCAAGACCACCGTGTACGAGTTCTCGCCGCTGGGCCTGGTGGAGATGACCCGC
AAGCGCACCGTGGAAAGCCTGGAGCGGCAGTTGTCGGAAACCTGCGGCCAGTGCGGCGGGCGCGGCACCATCAAGACCGC
CGAAACGGTGACCTACGAAATCTTCCGCGAGATCACCCGCGCGGTGCGGCAGTTCGATGCCGCGCGGCTGCTGGTGATCG
CCTCGTCCAAGGTGGTGGCGCGCATCACCGACGAAGAATCCGCGGCGGTGGCCGAACTGGAGGAATTCCTCGGCAAGAGC
ATCCGCTTCCAGTCCGACGACCAATACCTGCAGGAGCAGTTCGACGTGGTGCTGCTGTGA

Upstream 100 bases:

>100_bases
GGAGCGCTTCATTACCCATTTGTCTGGCAGCTATTCCGGCGTGATGGGATTGCCGCTGTTCCAGACCTCGCAATTGCTCA
CAGCCTTCGGAGCGCATTAG

Downstream 100 bases:

>100_bases
GGCAGGGAATGGAGAGTCGGGAATCGGGAATGGGGGAAGAGCGAAAGGCTCTCTGCGGGATACTGTTAACGGCCTTAGAA
TGGGGGAGTGCGCGAACGGA

Product: ribonuclease G

Products: NA

Alternate protein names: RNase G; Cytoplasmic axial filament protein [H]

Number of amino acids: Translated: 499; Mature: 498

Protein sequence:

>499_residues
MSEEILVNVTPRETRVAVIENGMLQELHIERGWRRGVVGNIYKGKVQRVMPGMQAAFVEVGLERAAFLHANDVVRPAPAP
ASVVDTEETPIPPPPAASVPIVELLRDGQDIVVQVVKDPIGTKGARLTTQISIPSRYLVLLPQSKVVGVSARIEDEAERL
RLKTIVSEVSAQHGGFGYIIRTNAEGQPAEALAEDIAYLSRVWNVVERRGREASACSIIYEDLSLPLRAVRDLIRKDVEK
VKVDSNETFVQLQAFVAKYMPVLAERLELYTGDRPIFDLYGVEDEIGRALDKQVPLKSGGYLVIDQTEAMTTIDVNTGSF
VGQRNLEETVFRTNLEAAQAVARQLRLRNLGGIIIIDFIDMDDPEHRRQVLRTLEKALARDHAKTTVYEFSPLGLVEMTR
KRTVESLERQLSETCGQCGGRGTIKTAETVTYEIFREITRAVRQFDAARLLVIASSKVVARITDEESAAVAELEEFLGKS
IRFQSDDQYLQEQFDVVLL

Sequences:

>Translated_499_residues
MSEEILVNVTPRETRVAVIENGMLQELHIERGWRRGVVGNIYKGKVQRVMPGMQAAFVEVGLERAAFLHANDVVRPAPAP
ASVVDTEETPIPPPPAASVPIVELLRDGQDIVVQVVKDPIGTKGARLTTQISIPSRYLVLLPQSKVVGVSARIEDEAERL
RLKTIVSEVSAQHGGFGYIIRTNAEGQPAEALAEDIAYLSRVWNVVERRGREASACSIIYEDLSLPLRAVRDLIRKDVEK
VKVDSNETFVQLQAFVAKYMPVLAERLELYTGDRPIFDLYGVEDEIGRALDKQVPLKSGGYLVIDQTEAMTTIDVNTGSF
VGQRNLEETVFRTNLEAAQAVARQLRLRNLGGIIIIDFIDMDDPEHRRQVLRTLEKALARDHAKTTVYEFSPLGLVEMTR
KRTVESLERQLSETCGQCGGRGTIKTAETVTYEIFREITRAVRQFDAARLLVIASSKVVARITDEESAAVAELEEFLGKS
IRFQSDDQYLQEQFDVVLL
>Mature_498_residues
SEEILVNVTPRETRVAVIENGMLQELHIERGWRRGVVGNIYKGKVQRVMPGMQAAFVEVGLERAAFLHANDVVRPAPAPA
SVVDTEETPIPPPPAASVPIVELLRDGQDIVVQVVKDPIGTKGARLTTQISIPSRYLVLLPQSKVVGVSARIEDEAERLR
LKTIVSEVSAQHGGFGYIIRTNAEGQPAEALAEDIAYLSRVWNVVERRGREASACSIIYEDLSLPLRAVRDLIRKDVEKV
KVDSNETFVQLQAFVAKYMPVLAERLELYTGDRPIFDLYGVEDEIGRALDKQVPLKSGGYLVIDQTEAMTTIDVNTGSFV
GQRNLEETVFRTNLEAAQAVARQLRLRNLGGIIIIDFIDMDDPEHRRQVLRTLEKALARDHAKTTVYEFSPLGLVEMTRK
RTVESLERQLSETCGQCGGRGTIKTAETVTYEIFREITRAVRQFDAARLLVIASSKVVARITDEESAAVAELEEFLGKSI
RFQSDDQYLQEQFDVVLL

Specific function: Involved in the processing of the 5'-end of 16S rRNA. Could be involved in chromosome segregation and cell division. It may be one of the components of the cytoplasmic axial filaments bundles or merely regulate the formation of this structure [H]

COG id: COG1530

COG function: function code J; Ribonucleases G and E

Gene ontology:

Cell location: Cytoplasm, cytoskeleton [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Escherichia coli, GI87082235, Length=499, Percent_Identity=56.312625250501, Blast_Score=531, Evalue=1e-152,
Organism=Escherichia coli, GI1787325, Length=476, Percent_Identity=36.1344537815126, Blast_Score=281, Evalue=8e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR019307
- InterPro:   IPR022967
- InterPro:   IPR004659 [H]

Pfam domain/function: PF10150 RNase_E_G; PF00575 S1 [H]

EC number: 3.1.4.- [C]

Molecular weight: Translated: 55636; Mature: 55505

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEEILVNVTPRETRVAVIENGMLQELHIERGWRRGVVGNIYKGKVQRVMPGMQAAFVEV
CCCCEEEEECCCCCEEEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHH
GLERAAFLHANDVVRPAPAPASVVDTEETPIPPPPAASVPIVELLRDGQDIVVQVVKDPI
HHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHCCC
GTKGARLTTQISIPSRYLVLLPQSKVVGVSARIEDEAERLRLKTIVSEVSAQHGGFGYII
CCCCCEEEEEEECCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEE
RTNAEGQPAEALAEDIAYLSRVWNVVERRGREASACSIIYEDLSLPLRAVRDLIRKDVEK
EECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH
VKVDSNETFVQLQAFVAKYMPVLAERLELYTGDRPIFDLYGVEDEIGRALDKQVPLKSGG
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCCCCCC
YLVIDQTEAMTTIDVNTGSFVGQRNLEETVFRTNLEAAQAVARQLRLRNLGGIIIIDFID
EEEEECCCCEEEEECCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEEC
MDDPEHRRQVLRTLEKALARDHAKTTVYEFSPLGLVEMTRKRTVESLERQLSETCGQCGG
CCCHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
RGTIKTAETVTYEIFREITRAVRQFDAARLLVIASSKVVARITDEESAAVAELEEFLGKS
CCCCCHHHHHHHHHHHHHHHHHHHHCHHEEEEEECCCEEEEECCCHHHHHHHHHHHHCCC
IRFQSDDQYLQEQFDVVLL
CCCCCCHHHHHHHCCEECC
>Mature Secondary Structure 
SEEILVNVTPRETRVAVIENGMLQELHIERGWRRGVVGNIYKGKVQRVMPGMQAAFVEV
CCCEEEEECCCCCEEEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHH
GLERAAFLHANDVVRPAPAPASVVDTEETPIPPPPAASVPIVELLRDGQDIVVQVVKDPI
HHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHCCC
GTKGARLTTQISIPSRYLVLLPQSKVVGVSARIEDEAERLRLKTIVSEVSAQHGGFGYII
CCCCCEEEEEEECCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEE
RTNAEGQPAEALAEDIAYLSRVWNVVERRGREASACSIIYEDLSLPLRAVRDLIRKDVEK
EECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH
VKVDSNETFVQLQAFVAKYMPVLAERLELYTGDRPIFDLYGVEDEIGRALDKQVPLKSGG
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCCCCCC
YLVIDQTEAMTTIDVNTGSFVGQRNLEETVFRTNLEAAQAVARQLRLRNLGGIIIIDFID
EEEEECCCCEEEEECCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEEC
MDDPEHRRQVLRTLEKALARDHAKTTVYEFSPLGLVEMTRKRTVESLERQLSETCGQCGG
CCCHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
RGTIKTAETVTYEIFREITRAVRQFDAARLLVIASSKVVARITDEESAAVAELEEFLGKS
CCCCCHHHHHHHHHHHHHHHHHHHHCHHEEEEEECCCEEEEECCCHHHHHHHHHHHHCCC
IRFQSDDQYLQEQFDVVLL
CCCCCCHHHHHHHCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]