| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is maf [C]
Identifier: 66767832
GI number: 66767832
Start: 1812162
End: 1812734
Strand: Direct
Name: maf [C]
Synonym: XC_1506
Alternate gene names: 66767832
Gene position: 1812162-1812734 (Clockwise)
Preceding gene: 66767829
Following gene: 66767833
Centisome position: 35.2
GC content: 66.67
Gene sequence:
>573_bases ATGCTCTATCTTGCCTCCCGATCGCCGCGCCGACACGAACTCCTGCAACGCCTCGACGTGCCGTTCCAGACCCTGGAACT GGACGTGCCCGAAGTGCGCGCGCCGGGTGAATCGCCCGAGCACTATGTGCACCGCGTGGCCTTGGACAAGGCGCGCGCGG GGCTGGCACTGGTACAGGCCGACGATGCCCAGGCCATCGTGCTCGGCTCCGATACCGAAGTGGTGCTGGGCGAGCGCGTG TTCGGCAAGCCGGTCGATGTCGATGATGCGATCGCCATGCTCACAGTGCTGGCGGGGCGCACCCACCAGGTGCTCACCGC GGTGGTGCTGGTCGGAGCACAGCGGCCACCGCTGCAGGCGCTGGTGGTGTCGGAGGTCACCTTCGATGCGCTCGACGCGA CCCGGATCGCCGCTTATGCGGCGTCTGGCGAGCCCATGGGCAAGGCCGGCGCGTACGCGATCCAGGGGCGTGCGGAGCGC TTCATTACCCATTTGTCTGGCAGCTATTCCGGCGTGATGGGATTGCCGCTGTTCCAGACCTCGCAATTGCTCACAGCCTT CGGAGCGCATTAG
Upstream 100 bases:
>100_bases CAGCGTGTTGTGGGACCGATGAATATGCTGTGAGTCGATCGTGCGCGGCGATGGCGCGACAGGCAAGCGTGCAGGGACGG CCAACAGGTATGCTGGGTGG
Downstream 100 bases:
>100_bases ATGTCGGAAGAGATCCTGGTCAACGTCACCCCCCGCGAAACCCGCGTGGCCGTGATCGAGAACGGCATGTTGCAAGAGCT GCATATCGAACGTGGTTGGC
Product: Maf-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MLYLASRSPRRHELLQRLDVPFQTLELDVPEVRAPGESPEHYVHRVALDKARAGLALVQADDAQAIVLGSDTEVVLGERV FGKPVDVDDAIAMLTVLAGRTHQVLTAVVLVGAQRPPLQALVVSEVTFDALDATRIAAYAASGEPMGKAGAYAIQGRAER FITHLSGSYSGVMGLPLFQTSQLLTAFGAH
Sequences:
>Translated_190_residues MLYLASRSPRRHELLQRLDVPFQTLELDVPEVRAPGESPEHYVHRVALDKARAGLALVQADDAQAIVLGSDTEVVLGERV FGKPVDVDDAIAMLTVLAGRTHQVLTAVVLVGAQRPPLQALVVSEVTFDALDATRIAAYAASGEPMGKAGAYAIQGRAER FITHLSGSYSGVMGLPLFQTSQLLTAFGAH >Mature_190_residues MLYLASRSPRRHELLQRLDVPFQTLELDVPEVRAPGESPEHYVHRVALDKARAGLALVQADDAQAIVLGSDTEVVLGERV FGKPVDVDDAIAMLTVLAGRTHQVLTAVVLVGAQRPPLQALVVSEVTFDALDATRIAAYAASGEPMGKAGAYAIQGRAER FITHLSGSYSGVMGLPLFQTSQLLTAFGAH
Specific function: Unknown
COG id: COG0424
COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the maf family
Homologues:
Organism=Homo sapiens, GI117553627, Length=192, Percent_Identity=35.4166666666667, Blast_Score=88, Evalue=5e-18, Organism=Homo sapiens, GI310133124, Length=139, Percent_Identity=36.6906474820144, Blast_Score=75, Evalue=3e-14, Organism=Homo sapiens, GI291045181, Length=136, Percent_Identity=37.5, Blast_Score=75, Evalue=3e-14, Organism=Homo sapiens, GI291045183, Length=185, Percent_Identity=32.4324324324324, Blast_Score=72, Evalue=2e-13, Organism=Escherichia coli, GI1789646, Length=188, Percent_Identity=49.468085106383, Blast_Score=158, Evalue=2e-40, Organism=Escherichia coli, GI87081830, Length=191, Percent_Identity=30.3664921465969, Blast_Score=67, Evalue=6e-13, Organism=Caenorhabditis elegans, GI193202443, Length=192, Percent_Identity=27.0833333333333, Blast_Score=78, Evalue=3e-15, Organism=Drosophila melanogaster, GI78706856, Length=179, Percent_Identity=37.4301675977654, Blast_Score=97, Evalue=6e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1506_XANC8 (Q4UWJ9)
Other databases:
- EMBL: CP000050 - RefSeq: YP_242594.1 - HSSP: Q02169 - ProteinModelPortal: Q4UWJ9 - SMR: Q4UWJ9 - STRING: Q4UWJ9 - GeneID: 3381849 - GenomeReviews: CP000050_GR - KEGG: xcb:XC_1506 - eggNOG: COG0424 - HOGENOM: HBG414045 - OMA: VVGLPLC - PhylomeDB: Q4UWJ9 - ProtClustDB: PRK04694 - BioCyc: XCAM314565:XC_1506-MONOMER - GO: GO:0005737 - HAMAP: MF_00528 - InterPro: IPR003697 - PIRSF: PIRSF006305 - TIGRFAMs: TIGR00172
Pfam domain/function: PF02545 Maf
EC number: NA
Molecular weight: Translated: 20310; Mature: 20310
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: ACT_SITE 31-31
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYLASRSPRRHELLQRLDVPFQTLELDVPEVRAPGESPEHYVHRVALDKARAGLALVQA CEEECCCCCHHHHHHHHHCCCHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEE DDAQAIVLGSDTEVVLGERVFGKPVDVDDAIAMLTVLAGRTHQVLTAVVLVGAQRPPLQA CCCCEEEECCCCCEEECCHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHH LVVSEVTFDALDATRIAAYAASGEPMGKAGAYAIQGRAERFITHLSGSYSGVMGLPLFQT HHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCEECCCHHHH SQLLTAFGAH HHHHHHHCCC >Mature Secondary Structure MLYLASRSPRRHELLQRLDVPFQTLELDVPEVRAPGESPEHYVHRVALDKARAGLALVQA CEEECCCCCHHHHHHHHHCCCHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEE DDAQAIVLGSDTEVVLGERVFGKPVDVDDAIAMLTVLAGRTHQVLTAVVLVGAQRPPLQA CCCCEEEECCCCCEEECCHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHH LVVSEVTFDALDATRIAAYAASGEPMGKAGAYAIQGRAERFITHLSGSYSGVMGLPLFQT HHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCEECCCHHHH SQLLTAFGAH HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA