Definition Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome.
Accession NC_007086
Length 5,148,708

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The map label for this gene is ybcJ [C]

Identifier: 66767798

GI number: 66767798

Start: 1771948

End: 1772190

Strand: Reverse

Name: ybcJ [C]

Synonym: XC_1472

Alternate gene names: 66767798

Gene position: 1772190-1771948 (Counterclockwise)

Preceding gene: 66767799

Following gene: 66767797

Centisome position: 34.42

GC content: 63.79

Gene sequence:

>243_bases
ATGCAATTTCTGGAATTCGACCTGGACGGCGAGTACATCGAGCTCAACCAGCTACTCAAGCTGGCCGGCATCGCCGACAG
CGGTGGCCAGGGCAAGGCGATCGTCGCCAGTGGCGCGGTCAGCGTCGATGGTGTGCAGGAGCTGCGCAAGACCGCCAAGA
TCCGGCCGGGCCAACTGGTGCAGTTGGATGACGTGGAGATCCGGGTGCTGGCGATGGATCCAGAGGCGGACCCGGCGGAA
TGA

Upstream 100 bases:

>100_bases
ACGCACAGAACGCCTCGCCAGTACACCCACGTCATTGCGCAGTGGTGTTGCCAGCCGCTCCAGGCGGATAATCGCCCCCC
TCCCTGTCACCGAGCACACC

Downstream 100 bases:

>100_bases
CAGTGGGCAGGTGAGCTGGCGCACCATCGCGCGCTCGGCCGACGACCCGGAGCGCGATGTCTGCAGTGTTTCGATTGCGG
CCGATTCGGCCACACCGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MQFLEFDLDGEYIELNQLLKLAGIADSGGQGKAIVASGAVSVDGVQELRKTAKIRPGQLVQLDDVEIRVLAMDPEADPAE

Sequences:

>Translated_80_residues
MQFLEFDLDGEYIELNQLLKLAGIADSGGQGKAIVASGAVSVDGVQELRKTAKIRPGQLVQLDDVEIRVLAMDPEADPAE
>Mature_80_residues
MQFLEFDLDGEYIELNQLLKLAGIADSGGQGKAIVASGAVSVDGVQELRKTAKIRPGQLVQLDDVEIRVLAMDPEADPAE

Specific function: Unknown

COG id: COG2501

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8568; Mature: 8568

Theoretical pI: Translated: 3.97; Mature: 3.97

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFLEFDLDGEYIELNQLLKLAGIADSGGQGKAIVASGAVSVDGVQELRKTAKIRPGQLV
CCEEEECCCCCEEEHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCEE
QLDDVEIRVLAMDPEADPAE
EECCCEEEEEEECCCCCCCC
>Mature Secondary Structure
MQFLEFDLDGEYIELNQLLKLAGIADSGGQGKAIVASGAVSVDGVQELRKTAKIRPGQLV
CCEEEECCCCCEEEHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCEE
QLDDVEIRVLAMDPEADPAE
EECCCEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA