| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is ada [H]
Identifier: 66767791
GI number: 66767791
Start: 1765949
End: 1767412
Strand: Reverse
Name: ada [H]
Synonym: XC_1465
Alternate gene names: 66767791
Gene position: 1767412-1765949 (Counterclockwise)
Preceding gene: 66767797
Following gene: 66767790
Centisome position: 34.33
GC content: 70.42
Gene sequence:
>1464_bases ATGCACACCGCCATGCCCGACCGGACCCATTGCGACTGCGCGCGACTGGCGCGCGATGCGCGCTTTGATGGGCTGTTTTT CACCGCGGTGCGCAGTACCGGCATCTACTGCCGGCCGGTGTGCCCCGCGCCGCCGCCCAAACCGTCCAATATCAGCTACT ACCCCACCGCTGCGGCGGCCACCGCGGCCGGTTATCGCCCGTGCCTGCGCTGCCGGCCGGAGCTGTCACCGCAGGCGCAG CAGCACCTGGGCGAAGAGAGCGTGCAGCGTGCGCTGGCGATGATTGCCGAAGGCGCGCTGCAGGAGCAGCCGGTGCAGAC GCTGGCCGACGCGGTGGGCATGAGTGCGCGGCAACTGCAACGGCAGTTCGTGCAGCAGCTCGGCGCCACCCCGATCCAGG TGCACGGCACGCGCCGGCTGCTGCTGGCCAAGCAGCTACTCACCGAAACCGCCCTGCCGGTCACCGAAGTGGCACTGGCC GCCGGCTTCAATAGCCTGCGGCGTTTCAACGCGGCCTTTCTGCAAGGCTGTGGCATGCCGCCGTCGGCGTTGCGCAAGCA ACGCAGCGACGTGCCCGGCGGCGACCTGTGTCTGCGGCTGGGCTACCGCCCGCCATTGGATTTGCCGGCGATGCTCACGT TCCTGCAGCGCCGTGCCATTCCCGGCATCGAGCAAGTGGATGCCGATGGATACCGGCGCGTGATCGGCGCGCCTGGCCAG GCCACGTTGATCCATGTCAGCGCTGCACCAACGCGCGACGAACTGCTGCTGCGGATCGGCGCCACCGACCCGCGCCAGAT TCCGCAGATCGTGCGACGCGTGCGCCGGATCTTCGACCTGGATGCAGACCTGCACGCCGTGCATGCCACGCTCGCGCAGG ACCCGCTGCTGGAACAGGCCATCACCCGCCGCCCGGGCTTGCGGGTGCCCGGTGGCTGGGACGGGTTCGAAGTCGCGGTG CGCGCCGTGTTGGGGCAGCAGATCAGCGTGGCCGGCGCGGCCACCCTGGCGGCGCGGTTGGTGGACCGGCATGGCGGCCA TCTCCCCGACATGCCGCCCGGCCTGGACCGCAGTTTCCCCACGCCCGCACAGATGGCCGACGCGCCGCTGGAACAGCTTG GGCTGCCACGCGCACGCGCAGCCACGTTGCGCGCACTGGCATCGGCCTGCGCCCAAGGCCGGCTGCATTTCGGCGCGGGC CAGCGCCTGCCCGACTTTGTCGCCGCCTGCACCGCGCTGCCCGGCATCGGGCCGTGGACCGCGCACTACATCGCCATGCG CGCGTTGTCGCATCCCGATGCGTTTCCGGCAGGAGATCTGATCCTGCAACAGGTGCTCGGTGCCCCCGAGCGCCTGAGCG AACGTGCTACCGAAGCGCGCTCGCAGGCATGGCGGCCCTGGCGCGCCTACGCCGTGCTGCACCTGTGGCATCTTGCCGTC GACCGAAAGGACACCCGCTCATGA
Upstream 100 bases:
>100_bases GCGGCCAGCAGTTGAACCCTGCCATGAACACGGCGGCCCTTCTGCAACCATGTCCGAAAACGGCCAGCCGCAGGCCCAGG CAGCGCATAGACTGGCGCCC
Downstream 100 bases:
>100_bases GCACGCTGCACTACGACACCTTCCCCTCGCCGATTGGTGCGCTGACCGTGGCGGCCGACACCACCGGCGTGCGCCACATC CTGTTCGCGCAGAATCGCCA
Product: DNA methylation and regulatory protein Ada
Products: NA
Alternate protein names: Regulatory protein of adaptative response; Methylated-DNA--protein-cysteine methyltransferase; O-6-methylguanine-DNA alkyltransferase [H]
Number of amino acids: Translated: 487; Mature: 487
Protein sequence:
>487_residues MHTAMPDRTHCDCARLARDARFDGLFFTAVRSTGIYCRPVCPAPPPKPSNISYYPTAAAATAAGYRPCLRCRPELSPQAQ QHLGEESVQRALAMIAEGALQEQPVQTLADAVGMSARQLQRQFVQQLGATPIQVHGTRRLLLAKQLLTETALPVTEVALA AGFNSLRRFNAAFLQGCGMPPSALRKQRSDVPGGDLCLRLGYRPPLDLPAMLTFLQRRAIPGIEQVDADGYRRVIGAPGQ ATLIHVSAAPTRDELLLRIGATDPRQIPQIVRRVRRIFDLDADLHAVHATLAQDPLLEQAITRRPGLRVPGGWDGFEVAV RAVLGQQISVAGAATLAARLVDRHGGHLPDMPPGLDRSFPTPAQMADAPLEQLGLPRARAATLRALASACAQGRLHFGAG QRLPDFVAACTALPGIGPWTAHYIAMRALSHPDAFPAGDLILQQVLGAPERLSERATEARSQAWRPWRAYAVLHLWHLAV DRKDTRS
Sequences:
>Translated_487_residues MHTAMPDRTHCDCARLARDARFDGLFFTAVRSTGIYCRPVCPAPPPKPSNISYYPTAAAATAAGYRPCLRCRPELSPQAQ QHLGEESVQRALAMIAEGALQEQPVQTLADAVGMSARQLQRQFVQQLGATPIQVHGTRRLLLAKQLLTETALPVTEVALA AGFNSLRRFNAAFLQGCGMPPSALRKQRSDVPGGDLCLRLGYRPPLDLPAMLTFLQRRAIPGIEQVDADGYRRVIGAPGQ ATLIHVSAAPTRDELLLRIGATDPRQIPQIVRRVRRIFDLDADLHAVHATLAQDPLLEQAITRRPGLRVPGGWDGFEVAV RAVLGQQISVAGAATLAARLVDRHGGHLPDMPPGLDRSFPTPAQMADAPLEQLGLPRARAATLRALASACAQGRLHFGAG QRLPDFVAACTALPGIGPWTAHYIAMRALSHPDAFPAGDLILQQVLGAPERLSERATEARSQAWRPWRAYAVLHLWHLAV DRKDTRS >Mature_487_residues MHTAMPDRTHCDCARLARDARFDGLFFTAVRSTGIYCRPVCPAPPPKPSNISYYPTAAAATAAGYRPCLRCRPELSPQAQ QHLGEESVQRALAMIAEGALQEQPVQTLADAVGMSARQLQRQFVQQLGATPIQVHGTRRLLLAKQLLTETALPVTEVALA AGFNSLRRFNAAFLQGCGMPPSALRKQRSDVPGGDLCLRLGYRPPLDLPAMLTFLQRRAIPGIEQVDADGYRRVIGAPGQ ATLIHVSAAPTRDELLLRIGATDPRQIPQIVRRVRRIFDLDADLHAVHATLAQDPLLEQAITRRPGLRVPGGWDGFEVAV RAVLGQQISVAGAATLAARLVDRHGGHLPDMPPGLDRSFPTPAQMADAPLEQLGLPRARAATLRALASACAQGRLHFGAG QRLPDFVAACTALPGIGPWTAHYIAMRALSHPDAFPAGDLILQQVLGAPERLSERATEARSQAWRPWRAYAVLHLWHLAV DRKDTRS
Specific function: The methylated ADA protein acts as a positive regulator of its own synthesis, as well as that of other proteins. The transcription-activating function of the ADA protein resides in its N-terminus [H]
COG id: COG0122
COG function: function code L; 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1788383, Length=281, Percent_Identity=33.4519572953737, Blast_Score=137, Evalue=1e-33, Organism=Escherichia coli, GI1788542, Length=150, Percent_Identity=41.3333333333333, Blast_Score=89, Evalue=8e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004026 - InterPro: IPR010316 - InterPro: IPR011257 - InterPro: IPR003265 - InterPro: IPR003583 - InterPro: IPR009057 - InterPro: IPR012287 - InterPro: IPR018062 - InterPro: IPR018060 - InterPro: IPR023170 - InterPro: IPR012294 [H]
Pfam domain/function: PF02805 Ada_Zn_binding; PF06029 AlkA_N; PF00730 HhH-GPD [H]
EC number: =2.1.1.63 [H]
Molecular weight: Translated: 52834; Mature: 52834
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTAMPDRTHCDCARLARDARFDGLFFTAVRSTGIYCRPVCPAPPPKPSNISYYPTAAAA CCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHH TAAGYRPCLRCRPELSPQAQQHLGEESVQRALAMIAEGALQEQPVQTLADAVGMSARQLQ HHHCCCHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH RQFVQQLGATPIQVHGTRRLLLAKQLLTETALPVTEVALAAGFNSLRRFNAAFLQGCGMP HHHHHHHCCCCEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC PSALRKQRSDVPGGDLCLRLGYRPPLDLPAMLTFLQRRAIPGIEQVDADGYRRVIGAPGQ HHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHCCCHHHHHHCCCCC ATLIHVSAAPTRDELLLRIGATDPRQIPQIVRRVRRIFDLDADLHAVHATLAQDPLLEQA EEEEEEECCCCHHHEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHH ITRRPGLRVPGGWDGFEVAVRAVLGQQISVAGAATLAARLVDRHGGHLPDMPPGLDRSFP HHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC TPAQMADAPLEQLGLPRARAATLRALASACAQGRLHFGAGQRLPDFVAACTALPGIGPWT CCHHHHCCCHHHHCCCHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHCCCCCHHH AHYIAMRALSHPDAFPAGDLILQQVLGAPERLSERATEARSQAWRPWRAYAVLHLWHLAV HHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH DRKDTRS CCHHCCC >Mature Secondary Structure MHTAMPDRTHCDCARLARDARFDGLFFTAVRSTGIYCRPVCPAPPPKPSNISYYPTAAAA CCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHH TAAGYRPCLRCRPELSPQAQQHLGEESVQRALAMIAEGALQEQPVQTLADAVGMSARQLQ HHHCCCHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH RQFVQQLGATPIQVHGTRRLLLAKQLLTETALPVTEVALAAGFNSLRRFNAAFLQGCGMP HHHHHHHCCCCEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC PSALRKQRSDVPGGDLCLRLGYRPPLDLPAMLTFLQRRAIPGIEQVDADGYRRVIGAPGQ HHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHCCCHHHHHHCCCCC ATLIHVSAAPTRDELLLRIGATDPRQIPQIVRRVRRIFDLDADLHAVHATLAQDPLLEQA EEEEEEECCCCHHHEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHH ITRRPGLRVPGGWDGFEVAVRAVLGQQISVAGAATLAARLVDRHGGHLPDMPPGLDRSFP HHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC TPAQMADAPLEQLGLPRARAATLRALASACAQGRLHFGAGQRLPDFVAACTALPGIGPWT CCHHHHCCCHHHHCCCHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHCCCCCHHH AHYIAMRALSHPDAFPAGDLILQQVLGAPERLSERATEARSQAWRPWRAYAVLHLWHLAV HHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH DRKDTRS CCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]