| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is yccK [H]
Identifier: 66767762
GI number: 66767762
Start: 1734031
End: 1735014
Strand: Direct
Name: yccK [H]
Synonym: XC_1436
Alternate gene names: 66767762
Gene position: 1734031-1735014 (Clockwise)
Preceding gene: 66767761
Following gene: 66767764
Centisome position: 33.68
GC content: 66.06
Gene sequence:
>984_bases ATGCATACACGCACACTAGGGCGCAGCGGGCTGCGGGTCTCCGCACTTGGCCTGGGCTGCATGGGGTTGAGCTACGGCTA CGGGCCGGCCACCGAGCGCAAACAGGCGGTGGCACTGCTGCACGCCGCGGTGGAGCAGGGCGTGACCTTGTTCGACACCG CAGAGGCGTACGGGCCGATCGCCAATGAGGAATTGCTGGGTGAGGCGCTTGCGCCGTACGGCGCGCAGGTGGTGGTTGCC ACCAAGTTCGGCTTTCGCGATGGACATGCCGATGCCGGTCTGGACAGCCGGCCCGCGCGTATCCGCGCAGTGGCCGAGGC CAGCCTGCTGCGGTTGAAGCGCGAGCGTATCGATCTGTTCTATCAGCACCGCGTGGATCCCGCGGTGCCGATCGAGGAAG TGGCCGGCACGGTCAAGGATTTGATCGCCGAAGGCAAGGTGGGCCATTTCGGCCTGTCCGAAGCCAGCGCGGACACCATC CGCCGCGCGCATGCGGTGCAACCGGTGGCCGCGGTGCAAAGCGAATACTCGCTGTGGTGGCGCGAACCGGAAGCCAGCGT GCTGCCCACGCTGGAAGAACTGGGGATTGGCTTCGTGCCGTTCAGTCCGCTCGGCAAGGCATTTCTGACAGGCGCGATCC AGCCCGACACGCAATTCGACCAGAGCGACTTCCGTAACAGCGTGCCGCGCTTTGCCGCGGAGGCGCGCCGTGCCAATCAG GCGCTGGTGCAACGCCTGCAAGCCATCGCGGACGACAAGGGCGCGACGCCGGCACAGGTGGCGCTGGCCTGGCTATTGTC GCGCAAGCCCTGGATCGTGCCGATTCCTGGCACCACCAAGCGTCATCGCCTGGACGAAAACATCGGCGGTGCTGCGCTCG TCTTGAGCAGCGACGAGCTGGCACGTATTCAACAGGCACTCGATGCGGTGGAGATTGTCGGTGAGCGCTACAGCCCGGAG CGGCAGAAGCTGGTGGGGAAGTGA
Upstream 100 bases:
>100_bases ACTGCAATCCACCCGGCCTTGGCGGCTAACGTGTGCGCTCGGCGCTGCCACCTCACGTGGGACGCCATCGATCGACGCGG CGCTGCCGCAGGAGCACACG
Downstream 100 bases:
>100_bases GCACGGCGGTGTAACCGCAGTGACGGTATCTGCAAGAGATGTGTCGTAGGAGCGCGCGCGATGGGGCGTTACCGATAACG CTTCATCGCGCGCGCTCCTA
Product: oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MHTRTLGRSGLRVSALGLGCMGLSYGYGPATERKQAVALLHAAVEQGVTLFDTAEAYGPIANEELLGEALAPYGAQVVVA TKFGFRDGHADAGLDSRPARIRAVAEASLLRLKRERIDLFYQHRVDPAVPIEEVAGTVKDLIAEGKVGHFGLSEASADTI RRAHAVQPVAAVQSEYSLWWREPEASVLPTLEELGIGFVPFSPLGKAFLTGAIQPDTQFDQSDFRNSVPRFAAEARRANQ ALVQRLQAIADDKGATPAQVALAWLLSRKPWIVPIPGTTKRHRLDENIGGAALVLSSDELARIQQALDAVEIVGERYSPE RQKLVGK
Sequences:
>Translated_327_residues MHTRTLGRSGLRVSALGLGCMGLSYGYGPATERKQAVALLHAAVEQGVTLFDTAEAYGPIANEELLGEALAPYGAQVVVA TKFGFRDGHADAGLDSRPARIRAVAEASLLRLKRERIDLFYQHRVDPAVPIEEVAGTVKDLIAEGKVGHFGLSEASADTI RRAHAVQPVAAVQSEYSLWWREPEASVLPTLEELGIGFVPFSPLGKAFLTGAIQPDTQFDQSDFRNSVPRFAAEARRANQ ALVQRLQAIADDKGATPAQVALAWLLSRKPWIVPIPGTTKRHRLDENIGGAALVLSSDELARIQQALDAVEIVGERYSPE RQKLVGK >Mature_327_residues MHTRTLGRSGLRVSALGLGCMGLSYGYGPATERKQAVALLHAAVEQGVTLFDTAEAYGPIANEELLGEALAPYGAQVVVA TKFGFRDGHADAGLDSRPARIRAVAEASLLRLKRERIDLFYQHRVDPAVPIEEVAGTVKDLIAEGKVGHFGLSEASADTI RRAHAVQPVAAVQSEYSLWWREPEASVLPTLEELGIGFVPFSPLGKAFLTGAIQPDTQFDQSDFRNSVPRFAAEARRANQ ALVQRLQAIADDKGATPAQVALAWLLSRKPWIVPIPGTTKRHRLDENIGGAALVLSSDELARIQQALDAVEIVGERYSPE RQKLVGK
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436969, Length=325, Percent_Identity=32.6153846153846, Blast_Score=128, Evalue=9e-30, Organism=Homo sapiens, GI4504825, Length=322, Percent_Identity=33.2298136645963, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI27436964, Length=305, Percent_Identity=31.8032786885246, Blast_Score=118, Evalue=8e-27, Organism=Homo sapiens, GI27436966, Length=305, Percent_Identity=31.8032786885246, Blast_Score=117, Evalue=1e-26, Organism=Homo sapiens, GI27436962, Length=305, Percent_Identity=31.8032786885246, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI27436971, Length=305, Percent_Identity=32.1311475409836, Blast_Score=112, Evalue=4e-25, Organism=Homo sapiens, GI223718702, Length=299, Percent_Identity=27.0903010033445, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI41327764, Length=290, Percent_Identity=27.5862068965517, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI41152114, Length=238, Percent_Identity=27.3109243697479, Blast_Score=71, Evalue=2e-12, Organism=Escherichia coli, GI87081735, Length=326, Percent_Identity=31.5950920245399, Blast_Score=146, Evalue=1e-36, Organism=Escherichia coli, GI1789375, Length=326, Percent_Identity=30.9815950920245, Blast_Score=130, Evalue=1e-31, Organism=Escherichia coli, GI1787674, Length=312, Percent_Identity=31.0897435897436, Blast_Score=113, Evalue=1e-26, Organism=Escherichia coli, GI1788070, Length=329, Percent_Identity=28.5714285714286, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1789199, Length=345, Percent_Identity=27.8260869565217, Blast_Score=85, Evalue=6e-18, Organism=Escherichia coli, GI1788081, Length=283, Percent_Identity=27.208480565371, Blast_Score=79, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6325169, Length=355, Percent_Identity=27.0422535211268, Blast_Score=113, Evalue=5e-26, Organism=Saccharomyces cerevisiae, GI6325384, Length=340, Percent_Identity=27.0588235294118, Blast_Score=102, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6323998, Length=322, Percent_Identity=24.5341614906832, Blast_Score=87, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6319958, Length=297, Percent_Identity=22.2222222222222, Blast_Score=77, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6319951, Length=315, Percent_Identity=23.8095238095238, Blast_Score=72, Evalue=9e-14, Organism=Saccharomyces cerevisiae, GI6322615, Length=246, Percent_Identity=21.5447154471545, Blast_Score=64, Evalue=3e-11, Organism=Drosophila melanogaster, GI24640980, Length=342, Percent_Identity=28.3625730994152, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI45549126, Length=339, Percent_Identity=28.6135693215339, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI24646159, Length=168, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24646155, Length=158, Percent_Identity=31.6455696202532, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 35343; Mature: 35343
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTRTLGRSGLRVSALGLGCMGLSYGYGPATERKQAVALLHAAVEQGVTLFDTAEAYGPI CCCCCCCCCCCEEEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEECHHHHCCC ANEELLGEALAPYGAQVVVATKFGFRDGHADAGLDSRPARIRAVAEASLLRLKRERIDLF CCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH YQHRVDPAVPIEEVAGTVKDLIAEGKVGHFGLSEASADTIRRAHAVQPVAAVQSEYSLWW HHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHEE REPEASVLPTLEELGIGFVPFSPLGKAFLTGAIQPDTQFDQSDFRNSVPRFAAEARRANQ CCCCCCCCCCHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH ALVQRLQAIADDKGATPAQVALAWLLSRKPWIVPIPGTTKRHRLDENIGGAALVLSSDEL HHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHCCCCCEEEEECCHHH ARIQQALDAVEIVGERYSPERQKLVGK HHHHHHHHHHHHHHCCCCCHHHHHCCC >Mature Secondary Structure MHTRTLGRSGLRVSALGLGCMGLSYGYGPATERKQAVALLHAAVEQGVTLFDTAEAYGPI CCCCCCCCCCCEEEEHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEECHHHHCCC ANEELLGEALAPYGAQVVVATKFGFRDGHADAGLDSRPARIRAVAEASLLRLKRERIDLF CCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH YQHRVDPAVPIEEVAGTVKDLIAEGKVGHFGLSEASADTIRRAHAVQPVAAVQSEYSLWW HHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHEE REPEASVLPTLEELGIGFVPFSPLGKAFLTGAIQPDTQFDQSDFRNSVPRFAAEARRANQ CCCCCCCCCCHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH ALVQRLQAIADDKGATPAQVALAWLLSRKPWIVPIPGTTKRHRLDENIGGAALVLSSDEL HHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHCCCCCEEEEECCHHH ARIQQALDAVEIVGERYSPERQKLVGK HHHHHHHHHHHHHHCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9274031; 9384377; 9106203 [H]