Click here to switch to the map view.

The map label for this gene is insH10 [H]

Identifier: 66767733

GI number: 66767733

Start: 1696713

End: 1697693

Strand: Reverse

Name: insH10 [H]

Synonym: XC_1407

Alternate gene names: 66767733

Gene position: 1697693-1696713 (Counterclockwise)

Preceding gene: 162017105

Following gene: 66767729

Centisome position: 32.97

GC content: 62.18

Gene sequence:

>981_bases
ATGCAACTGACGTTCGGTGACGCTGAGGGCCTGGGCAAGCGCAAGCAGACGCGCCGGGAGATCTTCCTGGCCGAGATGGA
GCAGGTCGTCCCGTGGCAGCAATTGCTCGGGCTGGTCGCGCCGCACTATCCCGTGTCGGGCCGGCCAGGTCGGCAGCCGT
ACGCACTGGCGAGGATGTTGCGGATTCATTTGCTGCAGCAGTGGTATGCGTTGAGCGATCCGGCGATGGAAGAAGCACTG
CACGAGATCCCGACCTTGCGGCGGTTTGCCCAGCTCGGTGGCTTGGACAACGTTCCGGACGAGACCACGATTCTCAACTT
TCGCCGCCTGCTGGAGACCCATGGCCTTGCCGCGCGGATGCTGGAAGCTGTCAACGCGCATCTGGCGCGCAAGGGCCAGA
GCCTGCGGTCGGGCACGATCGTCGATGCGACGCTGATCGCGGCGCCCAGTTCGACCAAGAACGCCGACCATGCGCGCGAC
CCCGAGATGCATCAGACCAAGAAGGGCAATCAGTGGTATTTCGGGATGAAGGCGCACATCGGCGTGGATGAGTTTTCCGG
GTTGGTGCACCACGTCCATTGCACGGCCGCCAACGTCGCCGACGTCACGGTGACGCACACGTTGCTGCATGGCAAAGAAG
ACAGCGTGTTTGGCGACAGCGGCTACACCGGTGCGGATAAGCGCGAAGAACTGCAGGACTGCGAGGCTGCATTTTTCATT
GCTGCCAAGCGTTCGGTGCTTCAAGCCATCGGCAACAAGCGGGAGCGTGCTCGGGAACAGCGTTGGGAACACTTCAAGGC
CAGCGTGCGCGCGAAGGTGGAGCATCCGTTCCGGGTGATCAAGCGCCAGTTCGGTTACACCAAGGTCCGCTATCGCGGCC
TGGCGAAGAACACCGCGCAGGTGCTGACGCTGTTTGCGCTGTCAAACCTGTGGATGAAGCGAAAGCAGTTATTGCCTGCT
ATGGGGAGCGTGCGCCTGTAA

Upstream 100 bases:

>100_bases
TGATACGCCCAGGGCGCTACGCGCAACGAGGGTCTTGAGTGTCTACGGAACCCTGGGCGTATCAACGCGACACTACCCGC
CTGATGTTGAGGGGTGATCC

Downstream 100 bases:

>100_bases
CGCAGGCAACACCCTGCAAACGCGCCGGAAACGGCAAAAAAATCGAGGATCTGAGCGCCGTCAGCCTAGCCGATGTAGTT
GGGCTCATCCTCCGACGCCG

Product: IS1479 transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MQLTFGDAEGLGKRKQTRREIFLAEMEQVVPWQQLLGLVAPHYPVSGRPGRQPYALARMLRIHLLQQWYALSDPAMEEAL
HEIPTLRRFAQLGGLDNVPDETTILNFRRLLETHGLAARMLEAVNAHLARKGQSLRSGTIVDATLIAAPSSTKNADHARD
PEMHQTKKGNQWYFGMKAHIGVDEFSGLVHHVHCTAANVADVTVTHTLLHGKEDSVFGDSGYTGADKREELQDCEAAFFI
AAKRSVLQAIGNKRERAREQRWEHFKASVRAKVEHPFRVIKRQFGYTKVRYRGLAKNTAQVLTLFALSNLWMKRKQLLPA
MGSVRL

Sequences:

>Translated_326_residues
MQLTFGDAEGLGKRKQTRREIFLAEMEQVVPWQQLLGLVAPHYPVSGRPGRQPYALARMLRIHLLQQWYALSDPAMEEAL
HEIPTLRRFAQLGGLDNVPDETTILNFRRLLETHGLAARMLEAVNAHLARKGQSLRSGTIVDATLIAAPSSTKNADHARD
PEMHQTKKGNQWYFGMKAHIGVDEFSGLVHHVHCTAANVADVTVTHTLLHGKEDSVFGDSGYTGADKREELQDCEAAFFI
AAKRSVLQAIGNKRERAREQRWEHFKASVRAKVEHPFRVIKRQFGYTKVRYRGLAKNTAQVLTLFALSNLWMKRKQLLPA
MGSVRL
>Mature_326_residues
MQLTFGDAEGLGKRKQTRREIFLAEMEQVVPWQQLLGLVAPHYPVSGRPGRQPYALARMLRIHLLQQWYALSDPAMEEAL
HEIPTLRRFAQLGGLDNVPDETTILNFRRLLETHGLAARMLEAVNAHLARKGQSLRSGTIVDATLIAAPSSTKNADHARD
PEMHQTKKGNQWYFGMKAHIGVDEFSGLVHHVHCTAANVADVTVTHTLLHGKEDSVFGDSGYTGADKREELQDCEAAFFI
AAKRSVLQAIGNKRERAREQRWEHFKASVRAKVEHPFRVIKRQFGYTKVRYRGLAKNTAQVLTLFALSNLWMKRKQLLPA
MGSVRL

Specific function: Involved in the transposition of the insertion sequence IS5 [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 11 family [H]

Homologues:

Organism=Escherichia coli, GI1787634, Length=311, Percent_Identity=53.6977491961415, Blast_Score=340, Evalue=1e-94,
Organism=Escherichia coli, GI1788303, Length=311, Percent_Identity=53.6977491961415, Blast_Score=337, Evalue=4e-94,
Organism=Escherichia coli, GI1789921, Length=311, Percent_Identity=53.3762057877814, Blast_Score=337, Evalue=7e-94,
Organism=Escherichia coli, GI1789612, Length=311, Percent_Identity=53.3762057877814, Blast_Score=337, Evalue=7e-94,
Organism=Escherichia coli, GI1789355, Length=311, Percent_Identity=53.3762057877814, Blast_Score=337, Evalue=7e-94,
Organism=Escherichia coli, GI1788518, Length=311, Percent_Identity=53.3762057877814, Blast_Score=337, Evalue=7e-94,
Organism=Escherichia coli, GI1788342, Length=311, Percent_Identity=53.3762057877814, Blast_Score=337, Evalue=7e-94,
Organism=Escherichia coli, GI1787592, Length=311, Percent_Identity=53.3762057877814, Blast_Score=337, Evalue=7e-94,
Organism=Escherichia coli, GI1786877, Length=311, Percent_Identity=53.3762057877814, Blast_Score=337, Evalue=7e-94,
Organism=Escherichia coli, GI1786764, Length=311, Percent_Identity=53.3762057877814, Blast_Score=337, Evalue=7e-94,
Organism=Escherichia coli, GI1786453, Length=311, Percent_Identity=53.3762057877814, Blast_Score=337, Evalue=7e-94,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002559
- InterPro:   IPR008490 [H]

Pfam domain/function: PF05598 DUF772; PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 36817; Mature: 36817

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLTFGDAEGLGKRKQTRREIFLAEMEQVVPWQQLLGLVAPHYPVSGRPGRQPYALARML
CCCCCCCHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
RIHLLQQWYALSDPAMEEALHEIPTLRRFAQLGGLDNVPDETTILNFRRLLETHGLAARM
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHH
LEAVNAHLARKGQSLRSGTIVDATLIAAPSSTKNADHARDPEMHQTKKGNQWYFGMKAHI
HHHHHHHHHHCCCHHCCCCEEEHEEEECCCCCCCCCCCCCCCHHHCCCCCEEEEEEEEEC
GVDEFSGLVHHVHCTAANVADVTVTHTLLHGKEDSVFGDSGYTGADKREELQDCEAAFFI
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
AAKRSVLQAIGNKRERAREQRWEHFKASVRAKVEHPFRVIKRQFGYTKVRYRGLAKNTAQ
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
VLTLFALSNLWMKRKQLLPAMGSVRL
HHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MQLTFGDAEGLGKRKQTRREIFLAEMEQVVPWQQLLGLVAPHYPVSGRPGRQPYALARML
CCCCCCCHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
RIHLLQQWYALSDPAMEEALHEIPTLRRFAQLGGLDNVPDETTILNFRRLLETHGLAARM
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHH
LEAVNAHLARKGQSLRSGTIVDATLIAAPSSTKNADHARDPEMHQTKKGNQWYFGMKAHI
HHHHHHHHHHCCCHHCCCCEEEHEEEECCCCCCCCCCCCCCCHHHCCCCCEEEEEEEEEC
GVDEFSGLVHHVHCTAANVADVTVTHTLLHGKEDSVFGDSGYTGADKREELQDCEAAFFI
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
AAKRSVLQAIGNKRERAREQRWEHFKASVRAKVEHPFRVIKRQFGYTKVRYRGLAKNTAQ
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
VLTLFALSNLWMKRKQLLPAMGSVRL
HHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9097039; 9097040; 9278503 [H]