| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is yhbJ [C]
Identifier: 66767634
GI number: 66767634
Start: 1597946
End: 1598794
Strand: Reverse
Name: yhbJ [C]
Synonym: XC_1307
Alternate gene names: 66767634
Gene position: 1598794-1597946 (Counterclockwise)
Preceding gene: 66767635
Following gene: 66767633
Centisome position: 31.05
GC content: 67.02
Gene sequence:
>849_bases ATGATCGTCAGCGGGTTGTCCGGCTCCGGCAAGTCGGTGGCGCTGAAGACCTTCGAAGACCTCGACTATTACTGTTCGGA CAATCTGCCGGTCGAGTTGCTGCCGGACTTTGTGCGCAGCCGGCTGCGGGGCAACCCGCTCGGCGACCAGCGCCTGGCAG TGGGCATCGATGTGCGCAGCCGCAGCGACCTGACCCAGCTGGCGCAGTGGCGGCAGGCCGCGCAGGAATACGGCATCGAG GCACGCCTGCTGTTTTTCGAAGCCAGCGACGAAGCCCTGCTCAAGCGTTACGCCGATACCCGCCGCCGCCATCCGCTCAG CCAGCTCGGCCTGGCGTTGCCGGAAGCGATCACCCGCGAGCGCGAATTGACCGCGCCGCTGCGTGCGCAGGCCGATGCCA TCATCGATACCAGCGCGCTCAACGTGCACCAACTGCGCCGACGCGTTGTCACCGAGTTCGCGCTGGGCAACAGCGACCGC TTGTCGCTGCTGTTCGAATCCTTCGCCTACAAGCGCGGCGTGCCGGCCGAGGCCGACTTCGTGTTCGATGCGCGTGTGCT GCCCAACCCGCACTGGGACCCGGAGCTGCGCCCACTCACCGGCCGCGATGCCGGCGTGCGCGATTACCTGGACAAGGAGC CGGACGTGATCCGCTATTCGGCGCAGATCGTGGACCTGCTCGATACCTGGCTGCCGCGCCTGCGCAACGACACCCGCAGC TACGTCACCATCGCGTTCGGCTGCACCGGCGGCAAGCACCGCTCGGTGTATCTGGCCGAACGCATGGCCCGGCATGCGCG CGAACAGGGCTGGCCGGAAGTGGCGACGTTTCATCGCGAGCAGGATTGA
Upstream 100 bases:
>100_bases TCCTGCGCACCAAGGGCATCGACCCGGCGGCGATGTTCATCGCCCGCCACAGCAACCTGCTGGAGCGACGCACCCCATGA GCATTGCCGCGTCCACCTTG
Downstream 100 bases:
>100_bases ATCTCGGGATTGGGGAATCGGGATTCGGGAATCGGGAATCGGGAATCGGGAATCGTTGAAGCGTTGTGCTGCGGTCTGCG CCGCGGCTGGTCAGCTGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MIVSGLSGSGKSVALKTFEDLDYYCSDNLPVELLPDFVRSRLRGNPLGDQRLAVGIDVRSRSDLTQLAQWRQAAQEYGIE ARLLFFEASDEALLKRYADTRRRHPLSQLGLALPEAITRERELTAPLRAQADAIIDTSALNVHQLRRRVVTEFALGNSDR LSLLFESFAYKRGVPAEADFVFDARVLPNPHWDPELRPLTGRDAGVRDYLDKEPDVIRYSAQIVDLLDTWLPRLRNDTRS YVTIAFGCTGGKHRSVYLAERMARHAREQGWPEVATFHREQD
Sequences:
>Translated_282_residues MIVSGLSGSGKSVALKTFEDLDYYCSDNLPVELLPDFVRSRLRGNPLGDQRLAVGIDVRSRSDLTQLAQWRQAAQEYGIE ARLLFFEASDEALLKRYADTRRRHPLSQLGLALPEAITRERELTAPLRAQADAIIDTSALNVHQLRRRVVTEFALGNSDR LSLLFESFAYKRGVPAEADFVFDARVLPNPHWDPELRPLTGRDAGVRDYLDKEPDVIRYSAQIVDLLDTWLPRLRNDTRS YVTIAFGCTGGKHRSVYLAERMARHAREQGWPEVATFHREQD >Mature_282_residues MIVSGLSGSGKSVALKTFEDLDYYCSDNLPVELLPDFVRSRLRGNPLGDQRLAVGIDVRSRSDLTQLAQWRQAAQEYGIE ARLLFFEASDEALLKRYADTRRRHPLSQLGLALPEAITRERELTAPLRAQADAIIDTSALNVHQLRRRVVTEFALGNSDR LSLLFESFAYKRGVPAEADFVFDARVLPNPHWDPELRPLTGRDAGVRDYLDKEPDVIRYSAQIVDLLDTWLPRLRNDTRS YVTIAFGCTGGKHRSVYLAERMARHAREQGWPEVATFHREQD
Specific function: Displays ATPase and GTPase activities [H]
COG id: COG1660
COG function: function code R; Predicted P-loop-containing kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0042 family [H]
Homologues:
Organism=Escherichia coli, GI1789598, Length=282, Percent_Identity=47.8723404255319, Blast_Score=260, Evalue=9e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005337 [H]
Pfam domain/function: PF03668 ATP_bind_2 [H]
EC number: NA
Molecular weight: Translated: 32065; Mature: 32065
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVSGLSGSGKSVALKTFEDLDYYCSDNLPVELLPDFVRSRLRGNPLGDQRLAVGIDVRS CEECCCCCCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCC RSDLTQLAQWRQAAQEYGIEARLLFFEASDEALLKRYADTRRRHPLSQLGLALPEAITRE HHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH RELTAPLRAQADAIIDTSALNVHQLRRRVVTEFALGNSDRLSLLFESFAYKRGVPAEADF HHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCE VFDARVLPNPHWDPELRPLTGRDAGVRDYLDKEPDVIRYSAQIVDLLDTWLPRLRNDTRS EEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC YVTIAFGCTGGKHRSVYLAERMARHAREQGWPEVATFHREQD EEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCC >Mature Secondary Structure MIVSGLSGSGKSVALKTFEDLDYYCSDNLPVELLPDFVRSRLRGNPLGDQRLAVGIDVRS CEECCCCCCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCC RSDLTQLAQWRQAAQEYGIEARLLFFEASDEALLKRYADTRRRHPLSQLGLALPEAITRE HHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH RELTAPLRAQADAIIDTSALNVHQLRRRVVTEFALGNSDRLSLLFESFAYKRGVPAEADF HHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCE VFDARVLPNPHWDPELRPLTGRDAGVRDYLDKEPDVIRYSAQIVDLLDTWLPRLRNDTRS EEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC YVTIAFGCTGGKHRSVYLAERMARHAREQGWPEVATFHREQD EEEEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA