| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is dinD [H]
Identifier: 66767533
GI number: 66767533
Start: 1465576
End: 1466436
Strand: Reverse
Name: dinD [H]
Synonym: XC_1206
Alternate gene names: 66767533
Gene position: 1466436-1465576 (Counterclockwise)
Preceding gene: 66767534
Following gene: 66767532
Centisome position: 28.48
GC content: 61.32
Gene sequence:
>861_bases TTGGCTATGAGTGACGAAAAAAAAGATATCGCCACACATGCTGACGAGGGCTTCCCGGCACACGACAGTGCCGCAGTCCG GCGCACATGGCACCAAGGCCAATGGTGGTTTGCGGTCATCGACGTGGTCGTCGCACTCACAGACTCGGAGAGTCCGGAAA ACTATCTACGCAACTTGCGTCGCCGCGACGAAGCACTTTCCGGCAGTTGGGACGCCCTGGTGATGCCCTTGCGCGTCACC ACGGCGGGCGGGCCGCAGTTGTTGAATTGCACAACGCTGGAAGGCGCATTACGCATCATTCAATCGATCCCCTCGCCAAA GGCCGAACCCTTCAAGCGCTGGCTGGCGCGCATCGGCAACGAACGTCTCCAGGGCGAAGAAGCCGTCGATTTCGATGCCC TGAGCGAGAACCAGCGACGTCTGTTCCTGCGCGACCAGATGAGCCAGCACAACAAGGATCTGGCCGCCGCAGCGAAACAG GCCGGTGTAGAGACGCCGCTGGAGTACGCCGTCTTCCAGGACCACGGCTACAAGGGGTTGTATGGCGGCCTGGGCGCAAA GGACATCCATGCGCGCAAAGCCCTGAAGAAGAGCCAGACGATCCTCGACCACATGGGCAGCACCGAACTGGCCGCCAACC TGTTCCGTGCCACGCAGGCCGAAGAAAAGCTGCGCCGCGACAACGTGCAGGGCAAGACGGCCGCCAACCGGACGCATCTG GAGGTGGGCCAGACAGTGCGCAAAACCATTCAGGAACTGGGTGGAACTTTGCCGGAAAACCTGCCCGCACCGGAAACCAG CATCAAGCGGCTGCAGAAGGACGCCAGGCCGGCATCGGGCAACGACAAGGCCAAGAAATGA
Upstream 100 bases:
>100_bases GAAGCAGAGATCGACCTGATGGCAGTGCGCCGCGAGCGCGAGCAGTTGAAGGGCGAGCTGGCAACACTCGAAATGCAGAT GGCCGCCTATCTCAAGGAGC
Downstream 100 bases:
>100_bases ACAGCCAGCATGGCGCATGGCAAATCAAGCACTTGCCGCAAGGGGTGGGGGGTCAATTTGACCCCCCCCTTCCCAGCGCA ATCCGGACCACCGCCTTACC
Product: DNA-damage-inducible protein d
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MAMSDEKKDIATHADEGFPAHDSAAVRRTWHQGQWWFAVIDVVVALTDSESPENYLRNLRRRDEALSGSWDALVMPLRVT TAGGPQLLNCTTLEGALRIIQSIPSPKAEPFKRWLARIGNERLQGEEAVDFDALSENQRRLFLRDQMSQHNKDLAAAAKQ AGVETPLEYAVFQDHGYKGLYGGLGAKDIHARKALKKSQTILDHMGSTELAANLFRATQAEEKLRRDNVQGKTAANRTHL EVGQTVRKTIQELGGTLPENLPAPETSIKRLQKDARPASGNDKAKK
Sequences:
>Translated_286_residues MAMSDEKKDIATHADEGFPAHDSAAVRRTWHQGQWWFAVIDVVVALTDSESPENYLRNLRRRDEALSGSWDALVMPLRVT TAGGPQLLNCTTLEGALRIIQSIPSPKAEPFKRWLARIGNERLQGEEAVDFDALSENQRRLFLRDQMSQHNKDLAAAAKQ AGVETPLEYAVFQDHGYKGLYGGLGAKDIHARKALKKSQTILDHMGSTELAANLFRATQAEEKLRRDNVQGKTAANRTHL EVGQTVRKTIQELGGTLPENLPAPETSIKRLQKDARPASGNDKAKK >Mature_285_residues AMSDEKKDIATHADEGFPAHDSAAVRRTWHQGQWWFAVIDVVVALTDSESPENYLRNLRRRDEALSGSWDALVMPLRVTT AGGPQLLNCTTLEGALRIIQSIPSPKAEPFKRWLARIGNERLQGEEAVDFDALSENQRRLFLRDQMSQHNKDLAAAAKQA GVETPLEYAVFQDHGYKGLYGGLGAKDIHARKALKKSQTILDHMGSTELAANLFRATQAEEKLRRDNVQGKTAANRTHLE VGQTVRKTIQELGGTLPENLPAPETSIKRLQKDARPASGNDKAKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082303, Length=146, Percent_Identity=63.013698630137, Blast_Score=199, Evalue=2e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31753; Mature: 31622
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMSDEKKDIATHADEGFPAHDSAAVRRTWHQGQWWFAVIDVVVALTDSESPENYLRNLR CCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHH RRDEALSGSWDALVMPLRVTTAGGPQLLNCTTLEGALRIIQSIPSPKAEPFKRWLARIGN HHHHHHCCCCCCEEEEEEEEECCCCCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCH ERLQGEEAVDFDALSENQRRLFLRDQMSQHNKDLAAAAKQAGVETPLEYAVFQDHGYKGL HHCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCC YGGLGAKDIHARKALKKSQTILDHMGSTELAANLFRATQAEEKLRRDNVQGKTAANRTHL CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHH EVGQTVRKTIQELGGTLPENLPAPETSIKRLQKDARPASGNDKAKK HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure AMSDEKKDIATHADEGFPAHDSAAVRRTWHQGQWWFAVIDVVVALTDSESPENYLRNLR CCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHH RRDEALSGSWDALVMPLRVTTAGGPQLLNCTTLEGALRIIQSIPSPKAEPFKRWLARIGN HHHHHHCCCCCCEEEEEEEEECCCCCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCH ERLQGEEAVDFDALSENQRRLFLRDQMSQHNKDLAAAAKQAGVETPLEYAVFQDHGYKGL HHCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCC YGGLGAKDIHARKALKKSQTILDHMGSTELAANLFRATQAEEKLRRDNVQGKTAANRTHL CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHH EVGQTVRKTIQELGGTLPENLPAPETSIKRLQKDARPASGNDKAKK HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2664418; 7686882; 9278503; 2158980; 1925027; 8195095; 8057377; 8002613 [H]