| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is cysK [H]
Identifier: 66767314
GI number: 66767314
Start: 1178328
End: 1179287
Strand: Reverse
Name: cysK [H]
Synonym: XC_0982
Alternate gene names: 66767314
Gene position: 1179287-1178328 (Counterclockwise)
Preceding gene: 66767315
Following gene: 66767313
Centisome position: 22.9
GC content: 68.54
Gene sequence:
>960_bases ATGGCCCTGTACGACAACATCCTCGACACCATCGGCCGCACCCCGGTGGTCAAACTCAACCGCCTCGCCCCGGACCACGT GTCCCTGTACGTCAAGGTCGAGTCGTTCAACCCGGGCGGATCGGTCAAGGACCGGCTGGCGCTGGCCATCATCCTGGACG CCGAACAACGCGGCCTGCTCAAGCCCGGCGACACCATCGTGGAAGCCACCTCCGGCAACACCGGCGTGGCGCTGGCCATG GTCGCTGCCGCGCGTGGCTACAAGTTCGTCGCCACCATGGTGGAAACCTTCTCGATCGAGCGCCGCAAGCTCATGCGCGC CTACGGCGCCAAGGTGATCCTGACCCCGGCCGCCGAGCGCGGCAGCGGCATGGTGCGCAAGGCCAAGGAACTGGCCGAAC AACACGGCTGGTTCCTGGCCAGCCAGTTCGCCAACCCCGCCAATCCGGCCTACCACCGCAACACCACCGCCGCCGAGATC CTGCGCGACTTCGCCGGCCACCGGCTGGACCATTTCGTCACCGGCTGGGGCACCGGCGGCACCCTCACCGGCGTGGGCGA AGTACTGCGCGTGGCCCGCCCGGAAGTGCGCATCACCGCCACCGAGCCGGCCGGCGCTGCGCTGCTGCAAGGCCAGGACT GGAAGCCGCACAAGATCCAGGGCTGGACGCCGGACTTCGTGCCGGAGGTGCTCAACCGCGAGGTCGCCCACGAAATCCTC AGCGTGGAAGACACCGACGCGATCAGCGTGGCTCGGCGGCTTGCCGCGGAAGAAGGCATCTTCACCGGCATCTCCGGCGG CGGCACCGTCTCCACTGCCCTGCGGGTGGCCGAAACCGCGGTGCCGGGCGCGGTGATCCTTGCGATGCTGCCGGATACCG GCGAGCGCTACTTCTCCACGCCATTGTTCGCCGACATCAACGAAGGCTCGGACGACGATTGGCTGGCCGGCCTGCCCTGA
Upstream 100 bases:
>100_bases TTCGGCGCCGCGCCGCTCACCGGCCAGCCCGCGCACTCACCCATCGCAACGCCCCACGCGCCCACACTCGCCCACGCAGC CTGATTCCGACGGAGACCCC
Downstream 100 bases:
>100_bases TCGCAGGCAGCGTGACGTCAGCGTTTCTTCCCAAAGGCCGCGCCCGCCAGCGCGGCCTTTGGCATGAAGTGTCCTGCGAT TTGCGGCGCGCTGCGGCGCT
Product: cysteine synthase
Products: NA
Alternate protein names: CSase; O-acetylserine (thiol)-lyase; OAS-TL; O-acetylserine sulfhydrylase [H]
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MALYDNILDTIGRTPVVKLNRLAPDHVSLYVKVESFNPGGSVKDRLALAIILDAEQRGLLKPGDTIVEATSGNTGVALAM VAAARGYKFVATMVETFSIERRKLMRAYGAKVILTPAAERGSGMVRKAKELAEQHGWFLASQFANPANPAYHRNTTAAEI LRDFAGHRLDHFVTGWGTGGTLTGVGEVLRVARPEVRITATEPAGAALLQGQDWKPHKIQGWTPDFVPEVLNREVAHEIL SVEDTDAISVARRLAAEEGIFTGISGGGTVSTALRVAETAVPGAVILAMLPDTGERYFSTPLFADINEGSDDDWLAGLP
Sequences:
>Translated_319_residues MALYDNILDTIGRTPVVKLNRLAPDHVSLYVKVESFNPGGSVKDRLALAIILDAEQRGLLKPGDTIVEATSGNTGVALAM VAAARGYKFVATMVETFSIERRKLMRAYGAKVILTPAAERGSGMVRKAKELAEQHGWFLASQFANPANPAYHRNTTAAEI LRDFAGHRLDHFVTGWGTGGTLTGVGEVLRVARPEVRITATEPAGAALLQGQDWKPHKIQGWTPDFVPEVLNREVAHEIL SVEDTDAISVARRLAAEEGIFTGISGGGTVSTALRVAETAVPGAVILAMLPDTGERYFSTPLFADINEGSDDDWLAGLP >Mature_318_residues ALYDNILDTIGRTPVVKLNRLAPDHVSLYVKVESFNPGGSVKDRLALAIILDAEQRGLLKPGDTIVEATSGNTGVALAMV AAARGYKFVATMVETFSIERRKLMRAYGAKVILTPAAERGSGMVRKAKELAEQHGWFLASQFANPANPAYHRNTTAAEIL RDFAGHRLDHFVTGWGTGGTLTGVGEVLRVARPEVRITATEPAGAALLQGQDWKPHKIQGWTPDFVPEVLNREVAHEILS VEDTDAISVARRLAAEEGIFTGISGGGTVSTALRVAETAVPGAVILAMLPDTGERYFSTPLFADINEGSDDDWLAGLP
Specific function: Two Cysteine Synthase Enzymes Are Found. Both Catalyze The Same Reaction. Cysteine Synthase B Can Also Use Thiosulfate In Place Of Sulfide To Give Cysteine Thiosulfonate As A Product. [C]
COG id: COG0031
COG function: function code E; Cysteine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cysteine synthase/cystathionine beta- synthase family [H]
Homologues:
Organism=Homo sapiens, GI295821202, Length=309, Percent_Identity=38.8349514563107, Blast_Score=206, Evalue=2e-53, Organism=Homo sapiens, GI295821200, Length=309, Percent_Identity=38.8349514563107, Blast_Score=206, Evalue=2e-53, Organism=Homo sapiens, GI4557415, Length=309, Percent_Identity=38.8349514563107, Blast_Score=206, Evalue=2e-53, Organism=Homo sapiens, GI11345492, Length=231, Percent_Identity=29.4372294372294, Blast_Score=65, Evalue=1e-10, Organism=Escherichia coli, GI2367138, Length=298, Percent_Identity=44.2953020134228, Blast_Score=238, Evalue=5e-64, Organism=Escherichia coli, GI1788754, Length=313, Percent_Identity=46.9648562300319, Blast_Score=226, Evalue=1e-60, Organism=Caenorhabditis elegans, GI17535051, Length=306, Percent_Identity=42.8104575163399, Blast_Score=233, Evalue=1e-61, Organism=Caenorhabditis elegans, GI17562970, Length=318, Percent_Identity=42.1383647798742, Blast_Score=223, Evalue=9e-59, Organism=Caenorhabditis elegans, GI115535073, Length=312, Percent_Identity=43.9102564102564, Blast_Score=217, Evalue=5e-57, Organism=Caenorhabditis elegans, GI32566674, Length=294, Percent_Identity=42.5170068027211, Blast_Score=211, Evalue=3e-55, Organism=Caenorhabditis elegans, GI17561720, Length=302, Percent_Identity=40.7284768211921, Blast_Score=188, Evalue=3e-48, Organism=Caenorhabditis elegans, GI32566672, Length=232, Percent_Identity=40.5172413793103, Blast_Score=154, Evalue=6e-38, Organism=Caenorhabditis elegans, GI17534315, Length=330, Percent_Identity=35.4545454545455, Blast_Score=153, Evalue=1e-37, Organism=Caenorhabditis elegans, GI25147552, Length=327, Percent_Identity=33.3333333333333, Blast_Score=147, Evalue=8e-36, Organism=Caenorhabditis elegans, GI17539800, Length=340, Percent_Identity=25.2941176470588, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17561716, Length=119, Percent_Identity=34.453781512605, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71996324, Length=326, Percent_Identity=24.8466257668712, Blast_Score=67, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6321594, Length=333, Percent_Identity=32.4324324324324, Blast_Score=172, Evalue=8e-44, Organism=Saccharomyces cerevisiae, GI6321449, Length=333, Percent_Identity=31.2312312312312, Blast_Score=107, Evalue=3e-24, Organism=Drosophila melanogaster, GI24643623, Length=312, Percent_Identity=39.1025641025641, Blast_Score=188, Evalue=4e-48, Organism=Drosophila melanogaster, GI20129101, Length=312, Percent_Identity=39.1025641025641, Blast_Score=188, Evalue=4e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001216 - InterPro: IPR005856 - InterPro: IPR005859 - InterPro: IPR001926 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =2.5.1.47 [H]
Molecular weight: Translated: 34196; Mature: 34065
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: PS00901 CYS_SYNTHASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALYDNILDTIGRTPVVKLNRLAPDHVSLYVKVESFNPGGSVKDRLALAIILDAEQRGLL CCHHHHHHHHHCCCCEEEEECCCCCEEEEEEEEEECCCCCCHHHHEEEEEEEECCCCCCC KPGDTIVEATSGNTGVALAMVAAARGYKFVATMVETFSIERRKLMRAYGAKVILTPAAER CCCCCEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCC GSGMVRKAKELAEQHGWFLASQFANPANPAYHRNTTAAEILRDFAGHRLDHFVTGWGTGG CCHHHHHHHHHHHHCCCEEEHHCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHEECCCCCC TLTGVGEVLRVARPEVRITATEPAGAALLQGQDWKPHKIQGWTPDFVPEVLNREVAHEIL CHHHHHHHHHHCCCCEEEEECCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH SVEDTDAISVARRLAAEEGIFTGISGGGTVSTALRVAETAVPGAVILAMLPDTGERYFST CCCCCHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCC PLFADINEGSDDDWLAGLP CCEEECCCCCCCCCCCCCC >Mature Secondary Structure ALYDNILDTIGRTPVVKLNRLAPDHVSLYVKVESFNPGGSVKDRLALAIILDAEQRGLL CHHHHHHHHHCCCCEEEEECCCCCEEEEEEEEEECCCCCCHHHHEEEEEEEECCCCCCC KPGDTIVEATSGNTGVALAMVAAARGYKFVATMVETFSIERRKLMRAYGAKVILTPAAER CCCCCEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCC GSGMVRKAKELAEQHGWFLASQFANPANPAYHRNTTAAEILRDFAGHRLDHFVTGWGTGG CCHHHHHHHHHHHHCCCEEEHHCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHEECCCCCC TLTGVGEVLRVARPEVRITATEPAGAALLQGQDWKPHKIQGWTPDFVPEVLNREVAHEIL CHHHHHHHHHHCCCCEEEEECCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH SVEDTDAISVARRLAAEEGIFTGISGGGTVSTALRVAETAVPGAVILAMLPDTGERYFST CCCCCHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCC PLFADINEGSDDDWLAGLP CCEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA