| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is recG [H]
Identifier: 66767279
GI number: 66767279
Start: 1136662
End: 1138803
Strand: Reverse
Name: recG [H]
Synonym: XC_0947
Alternate gene names: 66767279
Gene position: 1138803-1136662 (Counterclockwise)
Preceding gene: 66767280
Following gene: 66767278
Centisome position: 22.12
GC content: 69.37
Gene sequence:
>2142_bases GTGCCGCGCGCGCGTTCCGTCACCCCAAGCCTGGCCGTCGCTGGCCAGGCGCCGCTTTCCAGCTTGCCCGGGGTCGGCCC GAAAGTGGCCGAGAAATTTGCCGCGCGCGGCATTCTCAGCCTGCAGGATCTGTGGCTGCACCTGCCGCTGCGCTACGAAG ACCGCACCCGCCTGACCACCATCGCGCAGTTGCAGGGCGGGGTACCGGCGCAGATCGAGGGGCGTGTGGAGGCGATGGAG CGCGGCTTCCGCTTTCGCCCGGTGTTGCGCGTGGCGATGTCGGACGACTCGTGCGGCACGCTGGTGCTGCGCTTCTTCCA CTTTCGCGCGGCCCAGGTTGCGCAGTTTTCCCCGGGCACGCGCTTGCGCGTGTTCGGCACGCCCAAGCCCGGCCAGAACG GCTGGGAAATCGTTCACCCCAGTTACCGCGTCCTGGCGCCGGATGAAGATGCGGGCCTGGGCGATTGCCTGGACCCGGTG TATCCGGTGCTGGAAGGTGTCGGGCCGGCCACGCTGCGCAAGCTGATCGGCCAGGCATTGGAGCGCTTGCCGCCGGAGGC CGCGCTGGAACTGCTGCCGCCGCACTGGTTGCAGGACGAACAGCTGCCGTCGCTACGCAGCGCGCTGCTGACCATGCATC GCCCACCGGTGGACACCGACCCGCAGCAACTGCTGGCCGGCGGACATCCGGCGCAACAGCGATTGGCCATCGAAGAACTG CTGGCGCATCAAGTGAGCCTGCGCCGGCAACGCATCGCGCTGCAGCGCTTCCGCGCACCGCAGTTGCGCGGTGGCCGCTT GGTGCAGCAGTTACGCAAGGCCTTGCCGTTCCAGCTCACCGGCGCGCAGCAGCGCGTGTTCGAGCAGATCGCCCACGATC TGGCGCAGCCGGCACCGATGCTGCGGCTGGTGCAGGGCGATGTGGGCAGCGGCAAGACCGTGGTGGCGGCACTGGCCGCG ATGTTGGCGGTCGAACACGGCAAACAAGTGGCCCTGGCTGCGCCCACCGAGCTGCTGGCCGAGCAGCATCTGGCCAACCT GCGTGGCTGGCTGGAACCGCTGGGCGTGCGCATCGTCTGGCTGGCCGGCAAGGTCACCGGCAAGGCGCGCGTCGCGGCGA TGGCCGAAGTAGCCTCCGGGCAGGCACAGGTGGTGGTGGGCACGCATGCGCTGATGCAGGACGCGGTGGTCTTCCACGAT CTGGCGCTGGCCATCATCGACGAGCAGCACCGCTTCGGCGTGCATCAGCGCCTGGCGCTGCGCGACAAGGGCGCGGCTGC CGGCAGCGTGCCGCATCAACTGGTGATGACCGCCACGCCGATCCCGCGCACGCTGGCAATGGCGGCCTACGCGGATCTGC ACGTCTCGGCCATCGACGAACTGCCGCCCGGTCGCACGCCGGTGCAGACCATCGTGCTGAGCGCCGAGCGCCGGCCCGAG CTGGTGGAGCGCATTCGCGCGGCCTGTGCCGAAGGCCGGCAGGCGTACTGGGTCTGTACCCTGATCGAAGAAAGCGAAGA CACCGACAAGGGCGCGCAGAACGGCCCGCCGCGCATCGAAGCACAGGCCGCGCAGGTCACCTTCGAAACGCTCTCGGCGC AACTGCCGGGCGTGCGCGTGGCGCTGGTACACGGGCGCATGAAACCGGCCGAAAAGCAGCAGGCCATGCTGGATTTCAAG CAGGGCCGCACCGATCTGCTGGTCGCCACCACCGTGATCGAAGTGGGCGTGGATGTGCCCAACGCCTCGCTGATGATCAT CGAGAACGCCGAGCGTCTCGGCCTGGCCCAGTTGCACCAGTTACGCGGGCGGGTCGGGCGCGGCGCGGCGGCGTCCAGCT GCGTGCTGCTCTATCAGGGCCCGCTGTCGCTGATGGCACGCCAGCGGTTGGAGACCATGCGCCAGACCAACGATGGCTTC GTGATTGCCGAAAGGGATCTGGAGCTGCGTGGCCCCGGCGAGTTGCTGGGTACGCGCCAGACCGGTCTGGCGAGTTTCCG CATCGCCGACCTGGCGCGCGATGCCGGCCTGCTGCCGCGGGTGCAGGTGCTGGCGGAGCGCTTGCTCGACGAAGCGCCGG AGATCGCCGACCGCGTGGTCGCACGCTGGATCGGTGGCGCAGTGCGGTATGCGGCCGCTTGA
Upstream 100 bases:
>100_bases CCCGGCGCGCTCGACCATCGAGGTGTCGGGCCTGCCCAAGGGCGCTGGCTTCGAGGTCGACGCAGTGATGGTGCTCGACT GACCGAAGGCGCGATTCGCC
Downstream 100 bases:
>100_bases GTGGCGGGGATTGGGGATTTGGGAGTGGGGATTTGTCAGAGCGGGGCTGCTGCCTCATCTGATTCGCTTGCCTCGCCGAT CCTTGCGAAGATGCGACAAC
Product: ATP-dependent DNA helicase RecG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 713; Mature: 712
Protein sequence:
>713_residues MPRARSVTPSLAVAGQAPLSSLPGVGPKVAEKFAARGILSLQDLWLHLPLRYEDRTRLTTIAQLQGGVPAQIEGRVEAME RGFRFRPVLRVAMSDDSCGTLVLRFFHFRAAQVAQFSPGTRLRVFGTPKPGQNGWEIVHPSYRVLAPDEDAGLGDCLDPV YPVLEGVGPATLRKLIGQALERLPPEAALELLPPHWLQDEQLPSLRSALLTMHRPPVDTDPQQLLAGGHPAQQRLAIEEL LAHQVSLRRQRIALQRFRAPQLRGGRLVQQLRKALPFQLTGAQQRVFEQIAHDLAQPAPMLRLVQGDVGSGKTVVAALAA MLAVEHGKQVALAAPTELLAEQHLANLRGWLEPLGVRIVWLAGKVTGKARVAAMAEVASGQAQVVVGTHALMQDAVVFHD LALAIIDEQHRFGVHQRLALRDKGAAAGSVPHQLVMTATPIPRTLAMAAYADLHVSAIDELPPGRTPVQTIVLSAERRPE LVERIRAACAEGRQAYWVCTLIEESEDTDKGAQNGPPRIEAQAAQVTFETLSAQLPGVRVALVHGRMKPAEKQQAMLDFK QGRTDLLVATTVIEVGVDVPNASLMIIENAERLGLAQLHQLRGRVGRGAAASSCVLLYQGPLSLMARQRLETMRQTNDGF VIAERDLELRGPGELLGTRQTGLASFRIADLARDAGLLPRVQVLAERLLDEAPEIADRVVARWIGGAVRYAAA
Sequences:
>Translated_713_residues MPRARSVTPSLAVAGQAPLSSLPGVGPKVAEKFAARGILSLQDLWLHLPLRYEDRTRLTTIAQLQGGVPAQIEGRVEAME RGFRFRPVLRVAMSDDSCGTLVLRFFHFRAAQVAQFSPGTRLRVFGTPKPGQNGWEIVHPSYRVLAPDEDAGLGDCLDPV YPVLEGVGPATLRKLIGQALERLPPEAALELLPPHWLQDEQLPSLRSALLTMHRPPVDTDPQQLLAGGHPAQQRLAIEEL LAHQVSLRRQRIALQRFRAPQLRGGRLVQQLRKALPFQLTGAQQRVFEQIAHDLAQPAPMLRLVQGDVGSGKTVVAALAA MLAVEHGKQVALAAPTELLAEQHLANLRGWLEPLGVRIVWLAGKVTGKARVAAMAEVASGQAQVVVGTHALMQDAVVFHD LALAIIDEQHRFGVHQRLALRDKGAAAGSVPHQLVMTATPIPRTLAMAAYADLHVSAIDELPPGRTPVQTIVLSAERRPE LVERIRAACAEGRQAYWVCTLIEESEDTDKGAQNGPPRIEAQAAQVTFETLSAQLPGVRVALVHGRMKPAEKQQAMLDFK QGRTDLLVATTVIEVGVDVPNASLMIIENAERLGLAQLHQLRGRVGRGAAASSCVLLYQGPLSLMARQRLETMRQTNDGF VIAERDLELRGPGELLGTRQTGLASFRIADLARDAGLLPRVQVLAERLLDEAPEIADRVVARWIGGAVRYAAA >Mature_712_residues PRARSVTPSLAVAGQAPLSSLPGVGPKVAEKFAARGILSLQDLWLHLPLRYEDRTRLTTIAQLQGGVPAQIEGRVEAMER GFRFRPVLRVAMSDDSCGTLVLRFFHFRAAQVAQFSPGTRLRVFGTPKPGQNGWEIVHPSYRVLAPDEDAGLGDCLDPVY PVLEGVGPATLRKLIGQALERLPPEAALELLPPHWLQDEQLPSLRSALLTMHRPPVDTDPQQLLAGGHPAQQRLAIEELL AHQVSLRRQRIALQRFRAPQLRGGRLVQQLRKALPFQLTGAQQRVFEQIAHDLAQPAPMLRLVQGDVGSGKTVVAALAAM LAVEHGKQVALAAPTELLAEQHLANLRGWLEPLGVRIVWLAGKVTGKARVAAMAEVASGQAQVVVGTHALMQDAVVFHDL ALAIIDEQHRFGVHQRLALRDKGAAAGSVPHQLVMTATPIPRTLAMAAYADLHVSAIDELPPGRTPVQTIVLSAERRPEL VERIRAACAEGRQAYWVCTLIEESEDTDKGAQNGPPRIEAQAAQVTFETLSAQLPGVRVALVHGRMKPAEKQQAMLDFKQ GRTDLLVATTVIEVGVDVPNASLMIIENAERLGLAQLHQLRGRVGRGAAASSCVLLYQGPLSLMARQRLETMRQTNDGFV IAERDLELRGPGELLGTRQTGLASFRIADLARDAGLLPRVQVLAERLLDEAPEIADRVVARWIGGAVRYAAA
Specific function: Critical role in recombination and DNA repair. Help process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3' to 5' polarity. RecG unwind branched dup
COG id: COG1200
COG function: function code LK; RecG-like helicase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI2367254, Length=698, Percent_Identity=57.163323782235, Blast_Score=721, Evalue=0.0, Organism=Escherichia coli, GI1787357, Length=399, Percent_Identity=39.8496240601504, Blast_Score=249, Evalue=6e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR004609 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR016027 - InterPro: IPR004365 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C; PF01336 tRNA_anti [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 77409; Mature: 77278
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRARSVTPSLAVAGQAPLSSLPGVGPKVAEKFAARGILSLQDLWLHLPLRYEDRTRLTT CCCCCCCCCCCEECCCCCHHHCCCCCHHHHHHHHHCCCHHHHHHHEECCCCCCCCHHHHH IAQLQGGVPAQIEGRVEAMERGFRFRPVLRVAMSDDSCGTLVLRFFHFRAAQVAQFSPGT HHHHCCCCCCCCCCHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCC RLRVFGTPKPGQNGWEIVHPSYRVLAPDEDAGLGDCLDPVYPVLEGVGPATLRKLIGQAL EEEEEECCCCCCCCCEEECCCEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH ERLPPEAALELLPPHWLQDEQLPSLRSALLTMHRPPVDTDPQQLLAGGHPAQQRLAIEEL HHCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHH LAHQVSLRRQRIALQRFRAPQLRGGRLVQQLRKALPFQLTGAQQRVFEQIAHDLAQPAPM HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCEEECCHHHHHHHHHHHHHHCCCHH LRLVQGDVGSGKTVVAALAAMLAVEHGKQVALAAPTELLAEQHLANLRGWLEPLGVRIVW HHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHCEEEEE LAGKVTGKARVAAMAEVASGQAQVVVGTHALMQDAVVFHDLALAIIDEQHRFGVHQRLAL EECCCCCHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHH RDKGAAAGSVPHQLVMTATPIPRTLAMAAYADLHVSAIDELPPGRTPVQTIVLSAERRPE HCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHEECCCCCHH LVERIRAACAEGRQAYWVCTLIEESEDTDKGAQNGPPRIEAQAAQVTFETLSAQLPGVRV HHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEE ALVHGRMKPAEKQQAMLDFKQGRTDLLVATTVIEVGVDVPNASLMIIENAERLGLAQLHQ EEEECCCCCHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCCCEEEEEECCHHCCHHHHHH LRGRVGRGAAASSCVLLYQGPLSLMARQRLETMRQTNDGFVIAERDLELRGPGELLGTRQ HHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHCCCC TGLASFRIADLARDAGLLPRVQVLAERLLDEAPEIADRVVARWIGGAVRYAAA CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PRARSVTPSLAVAGQAPLSSLPGVGPKVAEKFAARGILSLQDLWLHLPLRYEDRTRLTT CCCCCCCCCCEECCCCCHHHCCCCCHHHHHHHHHCCCHHHHHHHEECCCCCCCCHHHHH IAQLQGGVPAQIEGRVEAMERGFRFRPVLRVAMSDDSCGTLVLRFFHFRAAQVAQFSPGT HHHHCCCCCCCCCCHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCC RLRVFGTPKPGQNGWEIVHPSYRVLAPDEDAGLGDCLDPVYPVLEGVGPATLRKLIGQAL EEEEEECCCCCCCCCEEECCCEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH ERLPPEAALELLPPHWLQDEQLPSLRSALLTMHRPPVDTDPQQLLAGGHPAQQRLAIEEL HHCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHH LAHQVSLRRQRIALQRFRAPQLRGGRLVQQLRKALPFQLTGAQQRVFEQIAHDLAQPAPM HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCEEECCHHHHHHHHHHHHHHCCCHH LRLVQGDVGSGKTVVAALAAMLAVEHGKQVALAAPTELLAEQHLANLRGWLEPLGVRIVW HHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHCEEEEE LAGKVTGKARVAAMAEVASGQAQVVVGTHALMQDAVVFHDLALAIIDEQHRFGVHQRLAL EECCCCCHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHH RDKGAAAGSVPHQLVMTATPIPRTLAMAAYADLHVSAIDELPPGRTPVQTIVLSAERRPE HCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHEECCCCCHH LVERIRAACAEGRQAYWVCTLIEESEDTDKGAQNGPPRIEAQAAQVTFETLSAQLPGVRV HHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEE ALVHGRMKPAEKQQAMLDFKQGRTDLLVATTVIEVGVDVPNASLMIIENAERLGLAQLHQ EEEECCCCCHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCCCEEEEEECCHHCCHHHHHH LRGRVGRGAAASSCVLLYQGPLSLMARQRLETMRQTNDGFVIAERDLELRGPGELLGTRQ HHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHCCCC TGLASFRIADLARDAGLLPRVQVLAERLLDEAPEIADRVVARWIGGAVRYAAA CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]