| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is 66766537
Identifier: 66766537
GI number: 66766537
Start: 239957
End: 240781
Strand: Reverse
Name: 66766537
Synonym: XC_0192
Alternate gene names: NA
Gene position: 240781-239957 (Counterclockwise)
Preceding gene: 66766538
Following gene: 77761075
Centisome position: 4.68
GC content: 70.3
Gene sequence:
>825_bases ATGCGTGCCGTGTTGCTAGCGCCAGCCCTGCTGGCCATCGGTGCAACTGCCTGCGGGCGCGATGTGCCACCTGCCGCGCC GGCGGGTGGGCCAGCGCCAGCGACTCCTGCCGCAACCGCGATGCCCGAACGCTCTTCCCAGGACGCACCGCTGCGCGCCG CCCTACAGATCCATCACTGGCAGCTGCAACGCGCCCACGATGCGCACGGCACTGCCCTGCGCAGCCTGTTTGTCGATGGC ATGCCACCGCTGCAGCTGGACTTCACCGCGCAACGCCTGCAGGTCAGCCAGACCTGCAATGCGCTCGGCGCGGCGTACAC CGTGGAAGCCGCGCACCTGCAGATCGGCCGGGTGGTGTCGAGCAAACGGCTGTGCGCGCAATCGCGGCGGATGGCACAGG AACGCGCCGCAAGCGACTTGCTCTCGGGACGCTTTGCGGTTGCGTTGGACAGCGCAGCCCCCCTGCCGACCCTGCGCCTG ACCCGCACCGACGGCACACGCCTGGAGTTCGCCGGCCAGCCCACCGCCGACACCCGCTTCGGTGGGCCCGGGCAAACCAT GTGGCTGGAGGTAGCCGGCGACACCGCGCCCTGCACCACGGCGCCCACCCGCCAGTGCCTGCAGGTGCGCGAGCACTTGC AGGCGACGCAGGCGGTGCTGCAGGACAGCGCCGATGGCTGGCAACCGCTCGATCAGCCAATCGAGGGCTTCACCCACGAA CCCGGCATTCGCACCTTGCTGCGCGTGACGCGCTATCCGGCCAGCGGCGACGAACGCGAAGCGCCGGTTTACGTGCTGGA GCAGCTGCTGGAAGCGCGCGGCTAA
Upstream 100 bases:
>100_bases GGCCGCCTGAGCCGGCCGATGCCGGGGCAGTGACGGCCGTCATTGCCCCGGCAGCCCGCTGGCGGTATCACTGAGCGGGT CCGCCGCCCGGGAGCCATCG
Downstream 100 bases:
>100_bases GCCGTGTGGCTAAGACGTAGGAGCGCGCTTGCGCGCGAGGGGCGTTCCCGGGGTTGCTGCCTATGCGCGCGATGTGGTCG GTGAGCTGCGCGGCAGATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MRAVLLAPALLAIGATACGRDVPPAAPAGGPAPATPAATAMPERSSQDAPLRAALQIHHWQLQRAHDAHGTALRSLFVDG MPPLQLDFTAQRLQVSQTCNALGAAYTVEAAHLQIGRVVSSKRLCAQSRRMAQERAASDLLSGRFAVALDSAAPLPTLRL TRTDGTRLEFAGQPTADTRFGGPGQTMWLEVAGDTAPCTTAPTRQCLQVREHLQATQAVLQDSADGWQPLDQPIEGFTHE PGIRTLLRVTRYPASGDEREAPVYVLEQLLEARG
Sequences:
>Translated_274_residues MRAVLLAPALLAIGATACGRDVPPAAPAGGPAPATPAATAMPERSSQDAPLRAALQIHHWQLQRAHDAHGTALRSLFVDG MPPLQLDFTAQRLQVSQTCNALGAAYTVEAAHLQIGRVVSSKRLCAQSRRMAQERAASDLLSGRFAVALDSAAPLPTLRL TRTDGTRLEFAGQPTADTRFGGPGQTMWLEVAGDTAPCTTAPTRQCLQVREHLQATQAVLQDSADGWQPLDQPIEGFTHE PGIRTLLRVTRYPASGDEREAPVYVLEQLLEARG >Mature_274_residues MRAVLLAPALLAIGATACGRDVPPAAPAGGPAPATPAATAMPERSSQDAPLRAALQIHHWQLQRAHDAHGTALRSLFVDG MPPLQLDFTAQRLQVSQTCNALGAAYTVEAAHLQIGRVVSSKRLCAQSRRMAQERAASDLLSGRFAVALDSAAPLPTLRL TRTDGTRLEFAGQPTADTRFGGPGQTMWLEVAGDTAPCTTAPTRQCLQVREHLQATQAVLQDSADGWQPLDQPIEGFTHE PGIRTLLRVTRYPASGDEREAPVYVLEQLLEARG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29243; Mature: 29243
Theoretical pI: Translated: 7.17; Mature: 7.17
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAVLLAPALLAIGATACGRDVPPAAPAGGPAPATPAATAMPERSSQDAPLRAALQIHHW CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHH QLQRAHDAHGTALRSLFVDGMPPLQLDFTAQRLQVSQTCNALGAAYTVEAAHLQIGRVVS HHHHHHCHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHH SKRLCAQSRRMAQERAASDLLSGRFAVALDSAAPLPTLRLTRTDGTRLEFAGQPTADTRF HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCCEEEECCCCCCCCCC GGPGQTMWLEVAGDTAPCTTAPTRQCLQVREHLQATQAVLQDSADGWQPLDQPIEGFTHE CCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCC PGIRTLLRVTRYPASGDEREAPVYVLEQLLEARG CHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MRAVLLAPALLAIGATACGRDVPPAAPAGGPAPATPAATAMPERSSQDAPLRAALQIHHW CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHH QLQRAHDAHGTALRSLFVDGMPPLQLDFTAQRLQVSQTCNALGAAYTVEAAHLQIGRVVS HHHHHHCHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHH SKRLCAQSRRMAQERAASDLLSGRFAVALDSAAPLPTLRLTRTDGTRLEFAGQPTADTRF HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCCEEEECCCCCCCCCC GGPGQTMWLEVAGDTAPCTTAPTRQCLQVREHLQATQAVLQDSADGWQPLDQPIEGFTHE CCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCC PGIRTLLRVTRYPASGDEREAPVYVLEQLLEARG CHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA