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The map label for this gene is sufS [C]

Identifier: 66766520

GI number: 66766520

Start: 218250

End: 218921

Strand: Reverse

Name: sufS [C]

Synonym: XC_0175

Alternate gene names: 66766520

Gene position: 218921-218250 (Counterclockwise)

Preceding gene: 77761075

Following gene: 66766515

Centisome position: 4.25

GC content: 68.9

Gene sequence:

>672_bases
ATGAGCGCCGCACCGTTGTTCCGTTCGCTACCCACACCCCTGGATTGGTCGCAGCGGGAGCAGGCATTTGTGCTGCCCCC
GGCCGTGACCTATATGGATGCCGCCGCACGCGGGCCCATGCTGCGGGCCGTGCAAACGGTGGCGCACCAGGCCATCGATG
CGCTGGCCACGCCATGGCAGTTGTCGTTCGCTGCATGGGTGGAGCAGATCGAGCAACTGCGTGCGTTGGCCGCGGGCCTG
TTCGATGGCGATACCGATGCGGTGGCGCTGGTGCCCTCGGCCGCACACGGGCTGGCCACTGCCGCGCGCAACCTGCACCT
GCAACGCGGCGAGGCCGTGTTGGTGCTGGAAGGACAGTTCCCCTCCAACCTGTTGATCTGGCAGCGCCGCTGCGCCGAGG
TGGGCGCGCAGATCGTCGCGGTGCCGATGGCAGCGGGGGGGGCTTTGACCGAGGCGGTGCTGCGGGCGATCACCGAGACG
GCGGCGCTGCGCGTGGTGAGCCTGCCGCACGCCTATTGGCTGGATGGCCGGCAACTGGACCTGGACCGCATCAGTGACGC
CGTGCACGCGCGCGGTGCGGCGCTGGTGCTGGACCTGAGCCAGAGCCTGGGCCTGAGTAGCGCACGCGGTGAGCGTTTTC
TGCGGGTGCTTCTGTCTGTCATCAACCGCTGA

Upstream 100 bases:

>100_bases
TCGACCAGCAGGGGTGATTGTGCAGACATCGCCATATGCTTGGGGAGCGACCGTGAACGCGCCGTGTGGGTGGCATGTCG
CTGCGCGTTAAGCTGTGCGC

Downstream 100 bases:

>100_bases
GCTTTGATCGTGCCGGCATCCTGCCTTTGTAGGAGCGCGCCTGACCGCGATGAGGCTTGCCCTGCAAACCGCTCCTGGGC
GACTCATGCCCGGATGCGCG

Product: hypothetical protein

Products: hydrogen selenide; @ALAN01.txt*l-alanine!; acceptor [C]

Alternate protein names: Class V Aminotransferase; Selenocysteine Lyase; Aminotransferase Class-V; NifS Protein; Aminotransferase Class V Superfamily; Secreted Protein

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MSAAPLFRSLPTPLDWSQREQAFVLPPAVTYMDAAARGPMLRAVQTVAHQAIDALATPWQLSFAAWVEQIEQLRALAAGL
FDGDTDAVALVPSAAHGLATAARNLHLQRGEAVLVLEGQFPSNLLIWQRRCAEVGAQIVAVPMAAGGALTEAVLRAITET
AALRVVSLPHAYWLDGRQLDLDRISDAVHARGAALVLDLSQSLGLSSARGERFLRVLLSVINR

Sequences:

>Translated_223_residues
MSAAPLFRSLPTPLDWSQREQAFVLPPAVTYMDAAARGPMLRAVQTVAHQAIDALATPWQLSFAAWVEQIEQLRALAAGL
FDGDTDAVALVPSAAHGLATAARNLHLQRGEAVLVLEGQFPSNLLIWQRRCAEVGAQIVAVPMAAGGALTEAVLRAITET
AALRVVSLPHAYWLDGRQLDLDRISDAVHARGAALVLDLSQSLGLSSARGERFLRVLLSVINR
>Mature_222_residues
SAAPLFRSLPTPLDWSQREQAFVLPPAVTYMDAAARGPMLRAVQTVAHQAIDALATPWQLSFAAWVEQIEQLRALAAGLF
DGDTDAVALVPSAAHGLATAARNLHLQRGEAVLVLEGQFPSNLLIWQRRCAEVGAQIVAVPMAAGGALTEAVLRAITETA
ALRVVSLPHAYWLDGRQLDLDRISDAVHARGAALVLDLSQSLGLSSARGERFLRVLLSVINR

Specific function: Cysteine Desulfurases Mobilize The Sulfur From L- Cysteine To Yield L-Alanine, An Essential Step In Sulfur Metabolism For Biosynthesis Of A Variety Of Sulfur-Containing Biomolecules. Component Of The Suf Operon, Which Is Activated And Required Under Speci

COG id: COG0520

COG function: function code E; Selenocysteine lyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.8.1.7 [C]

Molecular weight: Translated: 23896; Mature: 23765

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAAPLFRSLPTPLDWSQREQAFVLPPAVTYMDAAARGPMLRAVQTVAHQAIDALATPWQ
CCCCCCHHHCCCCCCCCCCCCEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHH
LSFAAWVEQIEQLRALAAGLFDGDTDAVALVPSAAHGLATAARNLHLQRGEAVLVLEGQF
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHEEECCCEEEEEECCC
PSNLLIWQRRCAEVGAQIVAVPMAAGGALTEAVLRAITETAALRVVSLPHAYWLDGRQLD
CCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEC
LDRISDAVHARGAALVLDLSQSLGLSSARGERFLRVLLSVINR
HHHHHHHHHHCCCEEEEECHHHCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SAAPLFRSLPTPLDWSQREQAFVLPPAVTYMDAAARGPMLRAVQTVAHQAIDALATPWQ
CCCCCHHHCCCCCCCCCCCCEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHH
LSFAAWVEQIEQLRALAAGLFDGDTDAVALVPSAAHGLATAARNLHLQRGEAVLVLEGQF
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHEEECCCEEEEEECCC
PSNLLIWQRRCAEVGAQIVAVPMAAGGALTEAVLRAITETAALRVVSLPHAYWLDGRQLD
CCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEC
LDRISDAVHARGAALVLDLSQSLGLSSARGERFLRVLLSVINR
HHHHHHHHHHCCCEEEEECHHHCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Pyridoxal phosphate [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: L-selenocysteine; reduced acceptor [C]

Specific reaction: L-selenocysteine + reduced acceptor = hydrogen selenide + @ALAN01.txt*l-alanine! + acceptor [C]

General reaction: Elimination of H2S or RSH [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA