Click here to switch to the map view.

The map label for this gene is 66048222

Identifier: 66048222

GI number: 66048222

Start: 5928168

End: 5928878

Strand: Direct

Name: 66048222

Synonym: Psyr_4998

Alternate gene names: NA

Gene position: 5928168-5928878 (Clockwise)

Preceding gene: 66048221

Following gene: 66048223

Centisome position: 97.28

GC content: 43.74

Gene sequence:

>711_bases
ATGATCGAACCACAACCCAACGCAATAAAAAAGGGACTTTACGGGTCTTTCTTGCTGATCGCCTTATTTGGCACAATGTC
GACGTTTAAATCTGATTTTTTCTGGCTGGTATGCCTCGGCCTCTTTACCCTACTCATGCGGGCAATATATTTGATTTACC
TGAGCGAAAGCTTCACTGCAATCGCAGTTCATTCTTTCACAGGCCTTTTCTCTTCATTTCTACTCATGAATACAAGCGTT
ATTTATCTTATAGCAAAATCTGAATACGGCGCTTCAACGACAGATGCTTTATCGTGGGCGATGATTCCGGCCTTACTGAT
GCTCGTTTCATTTTTATTTATTTACTTCACAAAGTCGAGATCACGTCAGCTGTCTTTTGAGACCAGAGATAACAAGGTCT
ATATGGTGCACGGTTATGTCAGCACGAGAAACGGAAACTTACTGAGCGGAGGCGTCATTGTGGCCGGAATCGCTGCAATG
ATCGTGTGGCCTATAGAACTGATCATTATGGTCAGTATCTGGATAGCACTGATCAATCTTTACCTTCTTTACTGGAACAG
GGACGCCATCCGAATACTGAAAAAAATCCTGGCGCTGGAAAAGAAGCACAATCGGTCTTACACGTTCGAGTACATCGAAC
AGCTTCGTGAAGCACGCAGTCGCTGGTGGCTGGGTAGGTTTTTGAAATGGGTAATATCATTCAGCAAATGA

Upstream 100 bases:

>100_bases
GTGAGACGACTGGTCATACACTTAAATATTTAATGTATGATCTTTCAGACCAAGCCATTAACTTTTACTATATTTCGCTT
TTAAAACTTGAGTTAACCAC

Downstream 100 bases:

>100_bases
AGTCAGGTAGCAGACCATCAGCGAAGAAGACAACTAACCGCCACACCCAACCAAGGAAGAAAAATGGGTAAACAATCTCG
CAGCAAGCGGGCCTCGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MIEPQPNAIKKGLYGSFLLIALFGTMSTFKSDFFWLVCLGLFTLLMRAIYLIYLSESFTAIAVHSFTGLFSSFLLMNTSV
IYLIAKSEYGASTTDALSWAMIPALLMLVSFLFIYFTKSRSRQLSFETRDNKVYMVHGYVSTRNGNLLSGGVIVAGIAAM
IVWPIELIIMVSIWIALINLYLLYWNRDAIRILKKILALEKKHNRSYTFEYIEQLREARSRWWLGRFLKWVISFSK

Sequences:

>Translated_236_residues
MIEPQPNAIKKGLYGSFLLIALFGTMSTFKSDFFWLVCLGLFTLLMRAIYLIYLSESFTAIAVHSFTGLFSSFLLMNTSV
IYLIAKSEYGASTTDALSWAMIPALLMLVSFLFIYFTKSRSRQLSFETRDNKVYMVHGYVSTRNGNLLSGGVIVAGIAAM
IVWPIELIIMVSIWIALINLYLLYWNRDAIRILKKILALEKKHNRSYTFEYIEQLREARSRWWLGRFLKWVISFSK
>Mature_236_residues
MIEPQPNAIKKGLYGSFLLIALFGTMSTFKSDFFWLVCLGLFTLLMRAIYLIYLSESFTAIAVHSFTGLFSSFLLMNTSV
IYLIAKSEYGASTTDALSWAMIPALLMLVSFLFIYFTKSRSRQLSFETRDNKVYMVHGYVSTRNGNLLSGGVIVAGIAAM
IVWPIELIIMVSIWIALINLYLLYWNRDAIRILKKILALEKKHNRSYTFEYIEQLREARSRWWLGRFLKWVISFSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27246; Mature: 27246

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEPQPNAIKKGLYGSFLLIALFGTMSTFKSDFFWLVCLGLFTLLMRAIYLIYLSESFTA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
IAVHSFTGLFSSFLLMNTSVIYLIAKSEYGASTTDALSWAMIPALLMLVSFLFIYFTKSR
HHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SRQLSFETRDNKVYMVHGYVSTRNGNLLSGGVIVAGIAAMIVWPIELIIMVSIWIALINL
CCEEEEEECCCEEEEEEEEEEECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLLYWNRDAIRILKKILALEKKHNRSYTFEYIEQLREARSRWWLGRFLKWVISFSK
HHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIEPQPNAIKKGLYGSFLLIALFGTMSTFKSDFFWLVCLGLFTLLMRAIYLIYLSESFTA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
IAVHSFTGLFSSFLLMNTSVIYLIAKSEYGASTTDALSWAMIPALLMLVSFLFIYFTKSR
HHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SRQLSFETRDNKVYMVHGYVSTRNGNLLSGGVIVAGIAAMIVWPIELIIMVSIWIALINL
CCEEEEEECCCEEEEEEEEEEECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLLYWNRDAIRILKKILALEKKHNRSYTFEYIEQLREARSRWWLGRFLKWVISFSK
HHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA