| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66047977
Identifier: 66047977
GI number: 66047977
Start: 5629557
End: 5631047
Strand: Direct
Name: 66047977
Synonym: Psyr_4753
Alternate gene names: NA
Gene position: 5629557-5631047 (Clockwise)
Preceding gene: 66047976
Following gene: 66047978
Centisome position: 92.38
GC content: 64.32
Gene sequence:
>1491_bases ATGATCACGCGCAATGCTCCACGTCATGCGCTGCTTGGCCTGATCCTGGCCGGTTCGCTCGGTGCCTTTTTCGCACTGCC GGCCCTGGCCGACGACGCCCCTGCCGAGCAGGGCCAGGCCGCTCCCGCGCTGGGCAGCAACCTGCAGACCCTCAAGGAAC TGGACGGCAAGGCTCCGGCCCGTCGCGCCCTGAATATCCAGACCTGGAATACCGCCGAGGGCGCCCGCGTGCTGTTCGTG GGATCCCGCGAATTGCCGATGTTCGACATGCGCCTGACGTTCGCCGCCGGCAGCAGCCAGGACCAGAAATCGCCCGGCAT TGCCCTGCTGACCAACGCCATGCTCAACGAGGGCATCAAAGGCAAGGACGTCAACGCCATCGCCCAGGGCTTCGAAGGCC TGGGCGCCGACTTCAGCAACGGGTCCTACCGCGACATGGCGGTGGCCTCGCTGCGCAGCCTGAGTGCTGCGGACAAGCGC GATCCGGCCCTGAAGCTGTTCAGTGAGGTGGTGGGCAAGCCCACCTTCCCTGCCGACTCCCTGGCCCGCATCAAGAACCA GTTGATCGCCAGCTTCGAGACTCAGAAACAGAGCCCCGGCGCTATCGCCAGCAAGGAGCTGTTCAATCGTCTGTACGGCG ATCACCCCTACGCTCATCCGAGCGAAGGCGACGCCAAGAGCGTCAACGCCATTACCCTGGCTCAGCTCAAGGCATTCCAC GCCAAAGGCTACGCGGCGGGCAATGCGGTGATTGCCCTGGTCGGTGACCTGTCGCGAGACGAAGCGCAGGCCATCGCGGC ACAGGTCTCGGCCTCGTTGCCCAAAGGCCCGGCGCTGGCCAAGGTCGCTGACCCGGTCGAGCCCAAGGCCGGCACCACGC ACATCGAATTTGCCTCCAACCAGACGCACCTGATGCTCGCGCAGTTGGGTGTCGATCGCAACGACCCCGACTATGCAGCA CTGACCGTGGGTAACTCGGTACTGGGCGGTGGCGGCTTCGGCAGCCGGCTGATGACCGAAGTCCGGGAAAAACGCGGCCT GACCTACGGCGTGTCTTCCGGCTTCACCGCCATGCAGGTGGCGGGGCCGTTCATGATCGGCCTGCAGACGCGTGCGGAAA TGAGCGAAAACACCCTCAAGCTGGTGCAGGACATCGTTCGCGACTTCCTCGCCAACGGTCCCACGCAGAAAGAAGTCGAC GATGTGAAGCGCGAACTGACCGGCAGCTTCCCGCTGACCGCAGCCAGCAATTCGGCCATCGTGGGTCAGTTGGGTGCCAT CGGCTTCTACAACCTGCCGCTGACCTACCTCGAGGACTACATGGCCGCCGCCCAGAACGTGACCGTCGAACAGGTGAAAG CAGCCATGAGCAAGCACCTGAGCGCCGACAAGATGGTCATCGTCACCGTGGGTCCTACCGTTGAGCAAAAACCATTGCCG GCGCCGACCGACAAACCCGTCCGCCAACCTGCAGGGGTCCCGGAACACTGA
Upstream 100 bases:
>100_bases TGCAGAGCGTGACCCCGCAAGACATCCAGAAAGCTGCCAACACCTATTTCACCCGTGAGCGCCTCAGCGTTGCGCACGTT CTGCCTGAGGAGAAAGCCAA
Downstream 100 bases:
>100_bases TGGCCAATCCACGTCCGAAGGGCCACAACGGCCTGGGTCAGCTTCGTATCATCGGCGGAGAATGGGGCAGCCGCCGCCTG ACCTTCCCCGACGCACCCGG
Product: insulinase-like:peptidase M16, C-terminal
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 496; Mature: 496
Protein sequence:
>496_residues MITRNAPRHALLGLILAGSLGAFFALPALADDAPAEQGQAAPALGSNLQTLKELDGKAPARRALNIQTWNTAEGARVLFV GSRELPMFDMRLTFAAGSSQDQKSPGIALLTNAMLNEGIKGKDVNAIAQGFEGLGADFSNGSYRDMAVASLRSLSAADKR DPALKLFSEVVGKPTFPADSLARIKNQLIASFETQKQSPGAIASKELFNRLYGDHPYAHPSEGDAKSVNAITLAQLKAFH AKGYAAGNAVIALVGDLSRDEAQAIAAQVSASLPKGPALAKVADPVEPKAGTTHIEFASNQTHLMLAQLGVDRNDPDYAA LTVGNSVLGGGGFGSRLMTEVREKRGLTYGVSSGFTAMQVAGPFMIGLQTRAEMSENTLKLVQDIVRDFLANGPTQKEVD DVKRELTGSFPLTAASNSAIVGQLGAIGFYNLPLTYLEDYMAAAQNVTVEQVKAAMSKHLSADKMVIVTVGPTVEQKPLP APTDKPVRQPAGVPEH
Sequences:
>Translated_496_residues MITRNAPRHALLGLILAGSLGAFFALPALADDAPAEQGQAAPALGSNLQTLKELDGKAPARRALNIQTWNTAEGARVLFV GSRELPMFDMRLTFAAGSSQDQKSPGIALLTNAMLNEGIKGKDVNAIAQGFEGLGADFSNGSYRDMAVASLRSLSAADKR DPALKLFSEVVGKPTFPADSLARIKNQLIASFETQKQSPGAIASKELFNRLYGDHPYAHPSEGDAKSVNAITLAQLKAFH AKGYAAGNAVIALVGDLSRDEAQAIAAQVSASLPKGPALAKVADPVEPKAGTTHIEFASNQTHLMLAQLGVDRNDPDYAA LTVGNSVLGGGGFGSRLMTEVREKRGLTYGVSSGFTAMQVAGPFMIGLQTRAEMSENTLKLVQDIVRDFLANGPTQKEVD DVKRELTGSFPLTAASNSAIVGQLGAIGFYNLPLTYLEDYMAAAQNVTVEQVKAAMSKHLSADKMVIVTVGPTVEQKPLP APTDKPVRQPAGVPEH >Mature_496_residues MITRNAPRHALLGLILAGSLGAFFALPALADDAPAEQGQAAPALGSNLQTLKELDGKAPARRALNIQTWNTAEGARVLFV GSRELPMFDMRLTFAAGSSQDQKSPGIALLTNAMLNEGIKGKDVNAIAQGFEGLGADFSNGSYRDMAVASLRSLSAADKR DPALKLFSEVVGKPTFPADSLARIKNQLIASFETQKQSPGAIASKELFNRLYGDHPYAHPSEGDAKSVNAITLAQLKAFH AKGYAAGNAVIALVGDLSRDEAQAIAAQVSASLPKGPALAKVADPVEPKAGTTHIEFASNQTHLMLAQLGVDRNDPDYAA LTVGNSVLGGGGFGSRLMTEVREKRGLTYGVSSGFTAMQVAGPFMIGLQTRAEMSENTLKLVQDIVRDFLANGPTQKEVD DVKRELTGSFPLTAASNSAIVGQLGAIGFYNLPLTYLEDYMAAAQNVTVEQVKAAMSKHLSADKMVIVTVGPTVEQKPLP APTDKPVRQPAGVPEH
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR007863 [H]
Pfam domain/function: PF05193 Peptidase_M16_C [H]
EC number: NA
Molecular weight: Translated: 52228; Mature: 52228
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITRNAPRHALLGLILAGSLGAFFALPALADDAPAEQGQAAPALGSNLQTLKELDGKAPA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCH RRALNIQTWNTAEGARVLFVGSRELPMFDMRLTFAAGSSQDQKSPGIALLTNAMLNEGIK HHEEEEEECCCCCCCEEEEECCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCC GKDVNAIAQGFEGLGADFSNGSYRDMAVASLRSLSAADKRDPALKLFSEVVGKPTFPADS CCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHH LARIKNQLIASFETQKQSPGAIASKELFNRLYGDHPYAHPSEGDAKSVNAITLAQLKAFH HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH AKGYAAGNAVIALVGDLSRDEAQAIAAQVSASLPKGPALAKVADPVEPKAGTTHIEFASN HCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCEEEEECCC QTHLMLAQLGVDRNDPDYAALTVGNSVLGGGGFGSRLMTEVREKRGLTYGVSSGFTAMQV CCEEEEEECCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCEEEEE AGPFMIGLQTRAEMSENTLKLVQDIVRDFLANGPTQKEVDDVKRELTGSFPLTAASNSAI CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEECCCCCC VGQLGAIGFYNLPLTYLEDYMAAAQNVTVEQVKAAMSKHLSADKMVIVTVGPTVEQKPLP EEHHCCCEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCC APTDKPVRQPAGVPEH CCCCCCCCCCCCCCCC >Mature Secondary Structure MITRNAPRHALLGLILAGSLGAFFALPALADDAPAEQGQAAPALGSNLQTLKELDGKAPA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCH RRALNIQTWNTAEGARVLFVGSRELPMFDMRLTFAAGSSQDQKSPGIALLTNAMLNEGIK HHEEEEEECCCCCCCEEEEECCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCC GKDVNAIAQGFEGLGADFSNGSYRDMAVASLRSLSAADKRDPALKLFSEVVGKPTFPADS CCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHH LARIKNQLIASFETQKQSPGAIASKELFNRLYGDHPYAHPSEGDAKSVNAITLAQLKAFH HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH AKGYAAGNAVIALVGDLSRDEAQAIAAQVSASLPKGPALAKVADPVEPKAGTTHIEFASN HCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCEEEEECCC QTHLMLAQLGVDRNDPDYAALTVGNSVLGGGGFGSRLMTEVREKRGLTYGVSSGFTAMQV CCEEEEEECCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCEEEEE AGPFMIGLQTRAEMSENTLKLVQDIVRDFLANGPTQKEVDDVKRELTGSFPLTAASNSAI CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEECCCCCC VGQLGAIGFYNLPLTYLEDYMAAAQNVTVEQVKAAMSKHLSADKMVIVTVGPTVEQKPLP EEHHCCCEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCC APTDKPVRQPAGVPEH CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]