| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is bfr [H]
Identifier: 66047748
GI number: 66047748
Start: 5387554
End: 5388018
Strand: Reverse
Name: bfr [H]
Synonym: Psyr_4521
Alternate gene names: 66047748
Gene position: 5388018-5387554 (Counterclockwise)
Preceding gene: 66047749
Following gene: 66047746
Centisome position: 88.42
GC content: 55.91
Gene sequence:
>465_bases ATGCAAGGCCACCCCGAAGTAATCGATTATCTCAACACGTTGCTCACGGGCGAACTGGCAGCTCGTGACCAATATTTCGT TCACTCACGCATGTACGAAGACTGGGGCTTTTCGAAGCTCTACGAGCGTATCAATCATGAGATGGAAGAAGAGGCGCAAC ACGCTGATGCGTTGATGCGTCGTATCCTGATGCTGGAAGGCACGCCGCGCATGCGCCCGGACGACCTCGACGTCGGCACC ACAGTGCCTGAGATGCTCGCCAGCGATCTGCGTCTCGAATACAAGGTACGTACTGCCCTGTGCAAGGGTATCGAGCTCTG TGAGCTGCACAGCGACTACGTGACCCGAGAAATCCTGCGCGTGCAGCTGGCTGATACCGAAGAAGACCATACCTACTGGC TCGAACAGCAGATGGGGCTGATCAAGTCCATCGGCCTGCAGAACTACCTGCAATCGCAGTTCTGA
Upstream 100 bases:
>100_bases GCGTAATTTCGCCACTTTTCGTCGGTTTATTGCGTTTTTCTAAGTGACCTCGCGCGGCGCTTGGTTCAAACTATCGTCTT TGAAGCAGGAGTCTGGTGCG
Downstream 100 bases:
>100_bases TTCGACCGCTCATAAAAAAGCTCCTGCACTTGCGTGACAGGAGCTTTTTTATATCCGGGTTCGACTGACGCCGAACCCGT TTTCGTCACACTCGTCAGGC
Product: bacterioferritin
Products: NA
Alternate protein names: BFR [H]
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MQGHPEVIDYLNTLLTGELAARDQYFVHSRMYEDWGFSKLYERINHEMEEEAQHADALMRRILMLEGTPRMRPDDLDVGT TVPEMLASDLRLEYKVRTALCKGIELCELHSDYVTREILRVQLADTEEDHTYWLEQQMGLIKSIGLQNYLQSQF
Sequences:
>Translated_154_residues MQGHPEVIDYLNTLLTGELAARDQYFVHSRMYEDWGFSKLYERINHEMEEEAQHADALMRRILMLEGTPRMRPDDLDVGT TVPEMLASDLRLEYKVRTALCKGIELCELHSDYVTREILRVQLADTEEDHTYWLEQQMGLIKSIGLQNYLQSQF >Mature_154_residues MQGHPEVIDYLNTLLTGELAARDQYFVHSRMYEDWGFSKLYERINHEMEEEAQHADALMRRILMLEGTPRMRPDDLDVGT TVPEMLASDLRLEYKVRTALCKGIELCELHSDYVTREILRVQLADTEEDHTYWLEQQMGLIKSIGLQNYLQSQF
Specific function: May perform analogous functions in iron detoxification and storage to that of animal ferritins [H]
COG id: COG2193
COG function: function code P; Bacterioferritin (cytochrome b1)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ferritin-like diiron domain [H]
Homologues:
Organism=Escherichia coli, GI1789733, Length=155, Percent_Identity=43.2258064516129, Blast_Score=124, Evalue=2e-30,
Paralogues:
None
Copy number: 1639 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002024 - InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: NA
Molecular weight: Translated: 18112; Mature: 18112
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: PS50905 FERRITIN_LIKE ; PS00549 BACTERIOFERRITIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGHPEVIDYLNTLLTGELAARDQYFVHSRMYEDWGFSKLYERINHEMEEEAQHADALMR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH RILMLEGTPRMRPDDLDVGTTVPEMLASDLRLEYKVRTALCKGIELCELHSDYVTREILR HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH VQLADTEEDHTYWLEQQMGLIKSIGLQNYLQSQF HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQGHPEVIDYLNTLLTGELAARDQYFVHSRMYEDWGFSKLYERINHEMEEEAQHADALMR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH RILMLEGTPRMRPDDLDVGTTVPEMLASDLRLEYKVRTALCKGIELCELHSDYVTREILR HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH VQLADTEEDHTYWLEQQMGLIKSIGLQNYLQSQF HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9358059 [H]