| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is ureE [H]
Identifier: 66047678
GI number: 66047678
Start: 5317246
End: 5317746
Strand: Direct
Name: ureE [H]
Synonym: Psyr_4451
Alternate gene names: 66047678
Gene position: 5317246-5317746 (Clockwise)
Preceding gene: 66047677
Following gene: 66047679
Centisome position: 87.26
GC content: 61.28
Gene sequence:
>501_bases ATGCTGGTGATTCACGACCGAATTGAACCTCAGGCCGAATGGGCCGCCGAGCTGCATTTGAATTTCGAGGCACGCAGCAA AAGTCGACTGCGCTGCTTCAGTGCGGAAAACGAAGACGTTGGCCTGTTTCTGCAACGCGGCCAGTCGCCCCTGCGCGATG GCGAGTTTCTTCAGGCCCAGGACGGCCGAGTGGTGCGTGTCTGCGCACGTCCTGAAAAACTCATGCACGTCACGTGCAGC AGCACGTTCGAACTGACCCGCGCGGCCTATCACCTTGGCAATCGTCACGTGGCCCTGCAAGTCGGCGACGGCTGGTTGCG CCTGCTCGACGATTACGTGCTCAAGGCGATGCTCGACCAACTGGGCGCCACTGTCGAAACCATCGAAGCGCCGTTCCAGC CGGAACATGGCGCCTACGGCGGTGGGCATCATCACTCGCGTGCAGGCGAGGAGGATTTCAACTATCCGCCGCGCATGCAC CAGTTCGGCGTGCGCAAGTGA
Upstream 100 bases:
>100_bases CTCGCATCACCTGCCTCTGTCAGCCTTTTCCCTACAAGCTGCACTGTTGGCAAGCCCCTTGCTCTGATTTGAAGCATCGC AATTGGCTGGAAGCTATCTG
Downstream 100 bases:
>100_bases ACAGCGCCTGGGCGCTGTTGCGCCTGGCCAGTCCGCAGTTGCCTATCGGTGGCTACAGCTATTCGCAAGGGCTGGAAATG GCAGTGGAGCAATCCATTGT
Product: urease accessory protein UreE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MLVIHDRIEPQAEWAAELHLNFEARSKSRLRCFSAENEDVGLFLQRGQSPLRDGEFLQAQDGRVVRVCARPEKLMHVTCS STFELTRAAYHLGNRHVALQVGDGWLRLLDDYVLKAMLDQLGATVETIEAPFQPEHGAYGGGHHHSRAGEEDFNYPPRMH QFGVRK
Sequences:
>Translated_166_residues MLVIHDRIEPQAEWAAELHLNFEARSKSRLRCFSAENEDVGLFLQRGQSPLRDGEFLQAQDGRVVRVCARPEKLMHVTCS STFELTRAAYHLGNRHVALQVGDGWLRLLDDYVLKAMLDQLGATVETIEAPFQPEHGAYGGGHHHSRAGEEDFNYPPRMH QFGVRK >Mature_166_residues MLVIHDRIEPQAEWAAELHLNFEARSKSRLRCFSAENEDVGLFLQRGQSPLRDGEFLQAQDGRVVRVCARPEKLMHVTCS STFELTRAAYHLGNRHVALQVGDGWLRLLDDYVLKAMLDQLGATVETIEAPFQPEHGAYGGGHHHSRAGEEDFNYPPRMH QFGVRK
Specific function: Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly [H]
COG id: COG2371
COG function: function code O; Urease accessory protein UreE
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ureE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012406 - InterPro: IPR007864 - InterPro: IPR004029 [H]
Pfam domain/function: PF05194 UreE_C; PF02814 UreE_N [H]
EC number: NA
Molecular weight: Translated: 18862; Mature: 18862
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVIHDRIEPQAEWAAELHLNFEARSKSRLRCFSAENEDVGLFLQRGQSPLRDGEFLQAQ CEEECCCCCCCHHEEEEEEEEECCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCEEECC DGRVVRVCARPEKLMHVTCSSTFELTRAAYHLGNRHVALQVGDGWLRLLDDYVLKAMLDQ CCCEEEEECCCCCEEEEECCCHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHH LGATVETIEAPFQPEHGAYGGGHHHSRAGEEDFNYPPRMHQFGVRK HCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC >Mature Secondary Structure MLVIHDRIEPQAEWAAELHLNFEARSKSRLRCFSAENEDVGLFLQRGQSPLRDGEFLQAQ CEEECCCCCCCHHEEEEEEEEECCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCEEECC DGRVVRVCARPEKLMHVTCSSTFELTRAAYHLGNRHVALQVGDGWLRLLDDYVLKAMLDQ CCCEEEEECCCCCEEEEECCCHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHH LGATVETIEAPFQPEHGAYGGGHHHSRAGEEDFNYPPRMHQFGVRK HCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12928499 [H]