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The map label for this gene is yafM [C]

Identifier: 66047648

GI number: 66047648

Start: 5286657

End: 5287115

Strand: Reverse

Name: yafM [C]

Synonym: Psyr_4421

Alternate gene names: 66047648

Gene position: 5287115-5286657 (Counterclockwise)

Preceding gene: 66047664

Following gene: 66047644

Centisome position: 86.76

GC content: 50.11

Gene sequence:

>459_bases
ATGAATCAGAGATCACAATCACATCGTTTACGCTTGGGGCGATTCTCCGGTATCGGCCAGATTTATTTAGTCACCGCAAA
AACATTCCAGAGAAATCCTGTCTTTTCCGATTGGCGCATGGGGCGTCTGTTGGTGGATGAGCTTCGACACGTTCAGGCGC
AGCAACTGGCCGATTCATTAGCCTGGGTTGTAATGCCCGACCACATTCACTGGCTACTGCAGTTGAATAGCCACTCATTA
TCCAGCGTTGTACAGCGCGTTAAATCGAAAAGCGCGATCGCCATCAACAGAGCCAGAGGCTGCAGTGGACCTTTTTGGCA
AAGCGGATTCCACGACGTCAGCATCCGCACTGAAGAAAGCCTTTTGGATTTTGCCCGTTATATCGTTGCCAATCCTGTTC
GAGCCAACCTGGTCAAAAGCGTACGCGATTATCCCTTATGGGACGCAATTTGGCTGTGA

Upstream 100 bases:

>100_bases
TCAACTGGAAGTCCGAAACACTTGGGCAAACCTTTGAGCGCCGCTGAGTGAGCCCGTTTCGTAGAGTCGTTCCCCGGCAC
GCAGCTATAAGGTGATGAGG

Downstream 100 bases:

>100_bases
AAAACCGGCCTCTTCGTGAGCAAGCTCACTCCCGCAGGTCCAGAGTTTTTTCGAGGAATGTGGATAACTCCCACAGGGCT
GGTGTGTTTCAAGTCATGTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MNQRSQSHRLRLGRFSGIGQIYLVTAKTFQRNPVFSDWRMGRLLVDELRHVQAQQLADSLAWVVMPDHIHWLLQLNSHSL
SSVVQRVKSKSAIAINRARGCSGPFWQSGFHDVSIRTEESLLDFARYIVANPVRANLVKSVRDYPLWDAIWL

Sequences:

>Translated_152_residues
MNQRSQSHRLRLGRFSGIGQIYLVTAKTFQRNPVFSDWRMGRLLVDELRHVQAQQLADSLAWVVMPDHIHWLLQLNSHSL
SSVVQRVKSKSAIAINRARGCSGPFWQSGFHDVSIRTEESLLDFARYIVANPVRANLVKSVRDYPLWDAIWL
>Mature_152_residues
MNQRSQSHRLRLGRFSGIGQIYLVTAKTFQRNPVFSDWRMGRLLVDELRHVQAQQLADSLAWVVMPDHIHWLLQLNSHSL
SSVVQRVKSKSAIAINRARGCSGPFWQSGFHDVSIRTEESLLDFARYIVANPVRANLVKSVRDYPLWDAIWL

Specific function: Unknown

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17537; Mature: 17537

Theoretical pI: Translated: 11.11; Mature: 11.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQRSQSHRLRLGRFSGIGQIYLVTAKTFQRNPVFSDWRMGRLLVDELRHVQAQQLADSL
CCCCCCHHHHHHHCCCCCCEEEEEEECHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AWVVMPDHIHWLLQLNSHSLSSVVQRVKSKSAIAINRARGCSGPFWQSGFHDVSIRTEES
EEEEECCCEEEEEEECCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCEEEECCHHH
LLDFARYIVANPVRANLVKSVRDYPLWDAIWL
HHHHHHHHHCCCHHHHHHHHHHCCCCHHHHCC
>Mature Secondary Structure
MNQRSQSHRLRLGRFSGIGQIYLVTAKTFQRNPVFSDWRMGRLLVDELRHVQAQQLADSL
CCCCCCHHHHHHHCCCCCCEEEEEEECHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AWVVMPDHIHWLLQLNSHSLSSVVQRVKSKSAIAINRARGCSGPFWQSGFHDVSIRTEES
EEEEECCCEEEEEEECCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCEEEECCHHH
LLDFARYIVANPVRANLVKSVRDYPLWDAIWL
HHHHHHHHHCCCHHHHHHHHHHCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA