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The map label for this gene is cbiD [H]

Identifier: 66047646

GI number: 66047646

Start: 5283298

End: 5284410

Strand: Direct

Name: cbiD [H]

Synonym: Psyr_4419

Alternate gene names: 66047646

Gene position: 5283298-5284410 (Clockwise)

Preceding gene: 66047645

Following gene: 66047647

Centisome position: 86.7

GC content: 64.33

Gene sequence:

>1113_bases
ATGCGCGAGGAAACCGCCGAACAACCTGCGCCACTGCGCAGTGGCCTGACCACTGGCAGCTGTGCGACCGCGACCAGCCT
CGCGGCGGCGCGGTTGTTGCTCTGCGGGCAGGTCAGCGACGCGGTGGAGATCGTCCTGCCCAAGGGTAAGCAGGTGCAGA
TGCGTCTGGAATTCTGCCGACTTGTGGATAACTTCGCGGAAGCCGCCACCCTCAAGGATGCCGGCGACGATCCGGATGTC
ACCCACGGCGCGCTGGTGTTTGCCCGCGTCAGGCTGCAAGCGGCAGCGGGCGTACGCTTCTTGGCGGGCGCAGGTGTCGG
CACCGTGACCCGCCCCGGGCTGGTGCTGGCAGTGGGTGAGCCGGCCATCAACCCGGTGCCCCGGCGCATGATGACCGAGC
ATTTGCTGCAACTGGCCGAAGAACAAGGCTACAGCGGCGGATTCGAAGTCACGATCGGCGTCGAGGGCGGCGAGGCGCTG
GCGCTCAAGACCATGAACCCGCGCCTGGGCATTCTCGGCGGACTGTCGATTCTCGGCACCAGCGGGATTGTCCGGCCGTT
CTCCTGCGCGGCTTATATCGCCTCGATCCACCAGGGTATCGATGTTGCTACCACCAACGGCTATCGGCATATCGCCGCCT
GCACCGGCAATGCCAGCGAAGACACCATGCGCCGCGTGTACAAAATCCCCGATATCGCCCTGATCGAGATGGGCGACTTC
GTCGGTGCCGTGCTCAAGCACTTGCGCAGGGTGTCTGTGGATAAGTTGAGCGTGTGCGGCGGCTTCGGCAAGATCAGCAA
GCTGGCCGCCGGCCATATGGACCTGCACAGCCGCCATTCCAGCATCGACCTGCCACAACTGGCGCGCTGGGCTGCGGATG
TCGGCGCGGATGCAGGCCTGCAACAACAGATCCTTGCAGCCAACACCAGTCAGCAAGCGCTGGCGATGAGCGCTGCGGCA
GGCGTGCCCCTCGGTGACGAAGTGTGTCGCCATGCGCTGAATTTCGCGCGCAGCATCGTGCCTGCGAGCGTTCAGGTGGA
GGTTTTCGCAATTGATCGTCAAGGCGGGCTGGTGGGTCAGGCTGGCGTTGACTCACAGAGAGAAATCACATGA

Upstream 100 bases:

>100_bases
AGCTGACCCGTATCCACGTCGCCCACGCGCAGCCCCTTGGCGAATTCGACACGTGGCGTCAGGCGTTGCCGATCACTCTG
CTGGACGTAGTCAAACCCTG

Downstream 100 bases:

>100_bases
AACGCATCCTGCTGCTGGGCGGCATTACCGAGGCGCTGGCCATTGCGCGAAGGCTCGGGCCTGAGCACATCTACAGCCTG
GCGGGTGTGGGCCGGGTGCC

Product: cobalt-precorrin-6A synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MREETAEQPAPLRSGLTTGSCATATSLAAARLLLCGQVSDAVEIVLPKGKQVQMRLEFCRLVDNFAEAATLKDAGDDPDV
THGALVFARVRLQAAAGVRFLAGAGVGTVTRPGLVLAVGEPAINPVPRRMMTEHLLQLAEEQGYSGGFEVTIGVEGGEAL
ALKTMNPRLGILGGLSILGTSGIVRPFSCAAYIASIHQGIDVATTNGYRHIAACTGNASEDTMRRVYKIPDIALIEMGDF
VGAVLKHLRRVSVDKLSVCGGFGKISKLAAGHMDLHSRHSSIDLPQLARWAADVGADAGLQQQILAANTSQQALAMSAAA
GVPLGDEVCRHALNFARSIVPASVQVEVFAIDRQGGLVGQAGVDSQREIT

Sequences:

>Translated_370_residues
MREETAEQPAPLRSGLTTGSCATATSLAAARLLLCGQVSDAVEIVLPKGKQVQMRLEFCRLVDNFAEAATLKDAGDDPDV
THGALVFARVRLQAAAGVRFLAGAGVGTVTRPGLVLAVGEPAINPVPRRMMTEHLLQLAEEQGYSGGFEVTIGVEGGEAL
ALKTMNPRLGILGGLSILGTSGIVRPFSCAAYIASIHQGIDVATTNGYRHIAACTGNASEDTMRRVYKIPDIALIEMGDF
VGAVLKHLRRVSVDKLSVCGGFGKISKLAAGHMDLHSRHSSIDLPQLARWAADVGADAGLQQQILAANTSQQALAMSAAA
GVPLGDEVCRHALNFARSIVPASVQVEVFAIDRQGGLVGQAGVDSQREIT
>Mature_370_residues
MREETAEQPAPLRSGLTTGSCATATSLAAARLLLCGQVSDAVEIVLPKGKQVQMRLEFCRLVDNFAEAATLKDAGDDPDV
THGALVFARVRLQAAAGVRFLAGAGVGTVTRPGLVLAVGEPAINPVPRRMMTEHLLQLAEEQGYSGGFEVTIGVEGGEAL
ALKTMNPRLGILGGLSILGTSGIVRPFSCAAYIASIHQGIDVATTNGYRHIAACTGNASEDTMRRVYKIPDIALIEMGDF
VGAVLKHLRRVSVDKLSVCGGFGKISKLAAGHMDLHSRHSSIDLPQLARWAADVGADAGLQQQILAANTSQQALAMSAAA
GVPLGDEVCRHALNFARSIVPASVQVEVFAIDRQGGLVGQAGVDSQREIT

Specific function: May catalyze the methylation of C-1 in cobalt-precorrin- 5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A [H]

COG id: COG1903

COG function: function code H; Cobalamin biosynthesis protein CbiD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002748 [H]

Pfam domain/function: PF01888 CbiD [H]

EC number: NA

Molecular weight: Translated: 38678; Mature: 38678

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREETAEQPAPLRSGLTTGSCATATSLAAARLLLCGQVSDAVEIVLPKGKQVQMRLEFCR
CCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHH
LVDNFAEAATLKDAGDDPDVTHGALVFARVRLQAAAGVRFLAGAGVGTVTRPGLVLAVGE
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEECC
PAINPVPRRMMTEHLLQLAEEQGYSGGFEVTIGVEGGEALALKTMNPRLGILGGLSILGT
CCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEECCCCCCHHCCHHHHCC
SGIVRPFSCAAYIASIHQGIDVATTNGYRHIAACTGNASEDTMRRVYKIPDIALIEMGDF
CCCCCHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCCCHHHHHHHHCCCCEEEEEHHHH
VGAVLKHLRRVSVDKLSVCGGFGKISKLAAGHMDLHSRHSSIDLPQLARWAADVGADAGL
HHHHHHHHHHCCHHHHHHHCCCHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHCCCCCCH
QQQILAANTSQQALAMSAAAGVPLGDEVCRHALNFARSIVPASVQVEVFAIDRQGGLVGQ
HHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEC
AGVDSQREIT
CCCCCCCCCC
>Mature Secondary Structure
MREETAEQPAPLRSGLTTGSCATATSLAAARLLLCGQVSDAVEIVLPKGKQVQMRLEFCR
CCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHH
LVDNFAEAATLKDAGDDPDVTHGALVFARVRLQAAAGVRFLAGAGVGTVTRPGLVLAVGE
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEECC
PAINPVPRRMMTEHLLQLAEEQGYSGGFEVTIGVEGGEALALKTMNPRLGILGGLSILGT
CCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEECCCCCCHHCCHHHHCC
SGIVRPFSCAAYIASIHQGIDVATTNGYRHIAACTGNASEDTMRRVYKIPDIALIEMGDF
CCCCCHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCCCHHHHHHHHCCCCEEEEEHHHH
VGAVLKHLRRVSVDKLSVCGGFGKISKLAAGHMDLHSRHSSIDLPQLARWAADVGADAGL
HHHHHHHHHHCCHHHHHHHCCCHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHCCCCCCH
QQQILAANTSQQALAMSAAAGVPLGDEVCRHALNFARSIVPASVQVEVFAIDRQGGLVGQ
HHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEC
AGVDSQREIT
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA