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The map label for this gene is yktD [H]

Identifier: 66047534

GI number: 66047534

Start: 5132214

End: 5133149

Strand: Reverse

Name: yktD [H]

Synonym: Psyr_4307

Alternate gene names: 66047534

Gene position: 5133149-5132214 (Counterclockwise)

Preceding gene: 66047535

Following gene: 66047533

Centisome position: 84.24

GC content: 46.37

Gene sequence:

>936_bases
GTGAAGGATAATCATGCAGAAAATATTAGTTGGTCCATAGTACGATACAGGAAAGCTATGATGCTCACTTCACAGAAAAA
CATTATTAATACGGGTATTCCAAGTCGAACTGCTTTTCAGGTTGCCGAACTCCGGGCCGCTCATCAGCTGCTGGACGAAC
CAATCATATTCAACGACCCGTTGGCCTTGCCGATTCTTGGCGAGCAGGCGGCAACCGACCTGCGACAGTATCCATTCCAA
TCCAACGATCTCCATGCGCGAGGCATACGTGCTGCCGTGGTTATTCGTAGTCGATTAGCTGAAGATGAACTCAAAAAATG
TGTACACTCCGGAGTGAAACAATATGTCGTTTTAGGTGCCGGCCTTGATACATTCGCTCTCAGGAATACTTATCTTGAAG
AGGGCCTTCAGGTATTTGAAGTGGACCATCCATCTACCCAAGAATGGAAGAGAAGTCTCCTTAAAGAAGCGTCCATAAAA
GTACCTGACTCATTGACGTTCGTGGCGGTTGATTTTGAAAGTAACACCTTAGCCGAAGAGCTGCAGAAAGCCGGTTTTCG
CGCAGATCAACCTGCATTTTTTTCTTGGCTAGGCGTGACGATATACATATCCCAGGAAGCGATACTTGACACACTAACGT
TTGTCGCGTCACTGCCAAAAGGAAGCGGCATAATTTTCGATTACGGCGTCACCCCTACGTTGCTCGATCCCATTGAAAAT
GCCATAGGCGATTATCTTGTGAGTTTGATCGGGCAACTGGGTGAACCATGGAAAACATGGCTTGACCCCGCTGTCATTGA
AAATGAGCTTCAGAGTATAGGATTTCAGTCCGTGAGAGACTATGGCTCTGTTGAACTGAATGAGCTCTATCTGGCTAGAA
GAAAGGATGGTTTGCGAATGCTCGGAACATTTCGATTGATATGTGCGAAGACTTGA

Upstream 100 bases:

>100_bases
AAAGGTCCTTAAAGCGGAATCTGGACGTTGCAAGCCAAATTGCAAGTGTCGATCGAAAAAACCAGCTATAGCAGACCAGC
AACTATTGATGGTGTAAAAC

Downstream 100 bases:

>100_bases
GTATGGGTTTGCACGGATCTAATAGGTGCGGTTTTGTGTATACATATACAGTTGTTGCTTCAACCCTCTAACGCTACGTG
ACGGTCCCAAGCAAACGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MKDNHAENISWSIVRYRKAMMLTSQKNIINTGIPSRTAFQVAELRAAHQLLDEPIIFNDPLALPILGEQAATDLRQYPFQ
SNDLHARGIRAAVVIRSRLAEDELKKCVHSGVKQYVVLGAGLDTFALRNTYLEEGLQVFEVDHPSTQEWKRSLLKEASIK
VPDSLTFVAVDFESNTLAEELQKAGFRADQPAFFSWLGVTIYISQEAILDTLTFVASLPKGSGIIFDYGVTPTLLDPIEN
AIGDYLVSLIGQLGEPWKTWLDPAVIENELQSIGFQSVRDYGSVELNELYLARRKDGLRMLGTFRLICAKT

Sequences:

>Translated_311_residues
MKDNHAENISWSIVRYRKAMMLTSQKNIINTGIPSRTAFQVAELRAAHQLLDEPIIFNDPLALPILGEQAATDLRQYPFQ
SNDLHARGIRAAVVIRSRLAEDELKKCVHSGVKQYVVLGAGLDTFALRNTYLEEGLQVFEVDHPSTQEWKRSLLKEASIK
VPDSLTFVAVDFESNTLAEELQKAGFRADQPAFFSWLGVTIYISQEAILDTLTFVASLPKGSGIIFDYGVTPTLLDPIEN
AIGDYLVSLIGQLGEPWKTWLDPAVIENELQSIGFQSVRDYGSVELNELYLARRKDGLRMLGTFRLICAKT
>Mature_311_residues
MKDNHAENISWSIVRYRKAMMLTSQKNIINTGIPSRTAFQVAELRAAHQLLDEPIIFNDPLALPILGEQAATDLRQYPFQ
SNDLHARGIRAAVVIRSRLAEDELKKCVHSGVKQYVVLGAGLDTFALRNTYLEEGLQVFEVDHPSTQEWKRSLLKEASIK
VPDSLTFVAVDFESNTLAEELQKAGFRADQPAFFSWLGVTIYISQEAILDTLTFVASLPKGSGIIFDYGVTPTLLDPIEN
AIGDYLVSLIGQLGEPWKTWLDPAVIENELQSIGFQSVRDYGSVELNELYLARRKDGLRMLGTFRLICAKT

Specific function: May be involved in polyketide synthesis [H]

COG id: COG3315

COG function: function code Q; O-Methyltransferase involved in polyketide biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0677 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011610
- InterPro:   IPR007213 [H]

Pfam domain/function: PF04072 LCM [H]

EC number: NA

Molecular weight: Translated: 34803; Mature: 34803

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDNHAENISWSIVRYRKAMMLTSQKNIINTGIPSRTAFQVAELRAAHQLLDEPIIFNDP
CCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCEECCC
LALPILGEQAATDLRQYPFQSNDLHARGIRAAVVIRSRLAEDELKKCVHSGVKQYVVLGA
CCCEEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEC
GLDTFALRNTYLEEGLQVFEVDHPSTQEWKRSLLKEASIKVPDSLTFVAVDFESNTLAEE
CCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHH
LQKAGFRADQPAFFSWLGVTIYISQEAILDTLTFVASLPKGSGIIFDYGVTPTLLDPIEN
HHHCCCCCCCCHHHHEEEEEEEEEHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHH
AIGDYLVSLIGQLGEPWKTWLDPAVIENELQSIGFQSVRDYGSVELNELYLARRKDGLRM
HHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHCCCHHH
LGTFRLICAKT
HHHHHEEEECC
>Mature Secondary Structure
MKDNHAENISWSIVRYRKAMMLTSQKNIINTGIPSRTAFQVAELRAAHQLLDEPIIFNDP
CCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCEECCC
LALPILGEQAATDLRQYPFQSNDLHARGIRAAVVIRSRLAEDELKKCVHSGVKQYVVLGA
CCCEEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEC
GLDTFALRNTYLEEGLQVFEVDHPSTQEWKRSLLKEASIKVPDSLTFVAVDFESNTLAEE
CCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHH
LQKAGFRADQPAFFSWLGVTIYISQEAILDTLTFVASLPKGSGIIFDYGVTPTLLDPIEN
HHHCCCCCCCCHHHHEEEEEEEEEHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHH
AIGDYLVSLIGQLGEPWKTWLDPAVIENELQSIGFQSVRDYGSVELNELYLARRKDGLRM
HHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHCCCHHH
LGTFRLICAKT
HHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1697575; 8990290; 8969500; 9384377 [H]