| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is 66047494
Identifier: 66047494
GI number: 66047494
Start: 5088571
End: 5089464
Strand: Direct
Name: 66047494
Synonym: Psyr_4267
Alternate gene names: NA
Gene position: 5088571-5089464 (Clockwise)
Preceding gene: 66047493
Following gene: 66047495
Centisome position: 83.51
GC content: 62.08
Gene sequence:
>894_bases ATGGCGATCCTGTGGTTATCGTCCACAGCGTGCGCCACCGAGAATGCGGCGCCCACGACAGCCGCTGGCGTTTTCGACTT TGGCGCAGGCTTCATGCCGCCCACCACCCCCAATGGCACCGTCGGCATGCGCATCAGCAACTACCACGCGGATGTCATCA AGGACAGCCACGGCAATGACAGCCCCAACGACTTTCAGATCAACGTCCTGGCGATCGGCCTCGCCTACTTGCGAATGACC GATCAGGCGTTTTTGGGAGCCCGCTATGGTTTCGCGGTGGTGCCGATCTTTTTCAAGATGGATGCAGACCTGGGCGTGAA CGCCGGGGGGCAACGGGTAGCCAGCGACAGTGCATCGCTGTTTCGTCAGGCGGACCTGCAAGTGGTGCCGATCATCCTGG ACTGGAAGCTGGGGCCGGGGCTGGGCATCAATACCCAACTAATGATTCAGGCGCCCACCGGGGACTATGACAAAAACCGC CTGGTCAGCCCTGGCACCCATCACTGGACGGTCTCTCCGCTGTTGAATGCGACCTACGTGTCACCCGGCGGCTTCGAGGT TTCCTCGAGTTTCCAGATCGATATAAACGCGCGTAACCCCGACACCGATTACCGCAGTGGCGTTGAGTACCGGCATGAGT TTGCAGTGGGCCAGCATGTCGGCGACTGGACCGTCGGCATCGGCGGCTACTACTACCGGCAGCTGTCGGACGACGACGCG CCGGGGCTGACCCGCGGCAATCGCGCGCGGGTACTCGCCGCAGGCCCTGCAGTGAGTTACTTCAAACCCGGCTCAGGTCT GCCGCCCATCTGGTTGCACGCCTACAAGGAGTTCGACGCCCGCAACCGTGCCGAGGGCTACACCGTGGCGCTGCGTACCG GCATCAGCTTTTAA
Upstream 100 bases:
>100_bases ACTGCCACCCCGCAAGGGAGGGCTGTGCTCGCCCATAAAAATAACAAGGCACTTACCGATGTCATTAAAAAACCACTTTC TCAGCGCTTCAGGGCTCGCC
Downstream 100 bases:
>100_bases TTGGCGTGCGCACCGCGACGACACGCTTTCAATCCTGGAGACGATCGATGAACGACCTGCACGAATTATTCAATACGCTG GACGGCCGTGGCCTGGCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MAILWLSSTACATENAAPTTAAGVFDFGAGFMPPTTPNGTVGMRISNYHADVIKDSHGNDSPNDFQINVLAIGLAYLRMT DQAFLGARYGFAVVPIFFKMDADLGVNAGGQRVASDSASLFRQADLQVVPIILDWKLGPGLGINTQLMIQAPTGDYDKNR LVSPGTHHWTVSPLLNATYVSPGGFEVSSSFQIDINARNPDTDYRSGVEYRHEFAVGQHVGDWTVGIGGYYYRQLSDDDA PGLTRGNRARVLAAGPAVSYFKPGSGLPPIWLHAYKEFDARNRAEGYTVALRTGISF
Sequences:
>Translated_297_residues MAILWLSSTACATENAAPTTAAGVFDFGAGFMPPTTPNGTVGMRISNYHADVIKDSHGNDSPNDFQINVLAIGLAYLRMT DQAFLGARYGFAVVPIFFKMDADLGVNAGGQRVASDSASLFRQADLQVVPIILDWKLGPGLGINTQLMIQAPTGDYDKNR LVSPGTHHWTVSPLLNATYVSPGGFEVSSSFQIDINARNPDTDYRSGVEYRHEFAVGQHVGDWTVGIGGYYYRQLSDDDA PGLTRGNRARVLAAGPAVSYFKPGSGLPPIWLHAYKEFDARNRAEGYTVALRTGISF >Mature_296_residues AILWLSSTACATENAAPTTAAGVFDFGAGFMPPTTPNGTVGMRISNYHADVIKDSHGNDSPNDFQINVLAIGLAYLRMTD QAFLGARYGFAVVPIFFKMDADLGVNAGGQRVASDSASLFRQADLQVVPIILDWKLGPGLGINTQLMIQAPTGDYDKNRL VSPGTHHWTVSPLLNATYVSPGGFEVSSSFQIDINARNPDTDYRSGVEYRHEFAVGQHVGDWTVGIGGYYYRQLSDDDAP GLTRGNRARVLAAGPAVSYFKPGSGLPPIWLHAYKEFDARNRAEGYTVALRTGISF
Specific function: Unknown
COG id: COG4313
COG function: function code C; Protein involved in meta-pathway of phenol degradation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32058; Mature: 31927
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAILWLSSTACATENAAPTTAAGVFDFGAGFMPPTTPNGTVGMRISNYHADVIKDSHGND CEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEEEECCEEEEEECCCCCC SPNDFQINVLAIGLAYLRMTDQAFLGARYGFAVVPIFFKMDADLGVNAGGQRVASDSASL CCCCEEEEEEEEEEEHHHHCCHHHHCCCCCEEEEEEEEEECCCCCCCCCCCEECCCHHHH FRQADLQVVPIILDWKLGPGLGINTQLMIQAPTGDYDKNRLVSPGTHHWTVSPLLNATYV HHHCCCEEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCEEEE SPGGFEVSSSFQIDINARNPDTDYRSGVEYRHEFAVGQHVGDWTVGIGGYYYRQLSDDDA CCCCEEECCEEEEEEECCCCCCHHHCCCHHHHHHHHCCCCCCEEEECCCEEEEECCCCCC PGLTRGNRARVLAAGPAVSYFKPGSGLPPIWLHAYKEFDARNRAEGYTVALRTGISF CCCCCCCCEEEEEECCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCC >Mature Secondary Structure AILWLSSTACATENAAPTTAAGVFDFGAGFMPPTTPNGTVGMRISNYHADVIKDSHGND EEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEEEECCEEEEEECCCCCC SPNDFQINVLAIGLAYLRMTDQAFLGARYGFAVVPIFFKMDADLGVNAGGQRVASDSASL CCCCEEEEEEEEEEEHHHHCCHHHHCCCCCEEEEEEEEEECCCCCCCCCCCEECCCHHHH FRQADLQVVPIILDWKLGPGLGINTQLMIQAPTGDYDKNRLVSPGTHHWTVSPLLNATYV HHHCCCEEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCEEEE SPGGFEVSSSFQIDINARNPDTDYRSGVEYRHEFAVGQHVGDWTVGIGGYYYRQLSDDDA CCCCEEECCEEEEEEECCCCCCHHHCCCHHHHHHHHCCCCCCEEEECCCEEEEECCCCCC PGLTRGNRARVLAAGPAVSYFKPGSGLPPIWLHAYKEFDARNRAEGYTVALRTGISF CCCCCCCCEEEEEECCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA