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The map label for this gene is yjjK [C]

Identifier: 66047491

GI number: 66047491

Start: 5081416

End: 5083080

Strand: Reverse

Name: yjjK [C]

Synonym: Psyr_4264

Alternate gene names: 66047491

Gene position: 5083080-5081416 (Counterclockwise)

Preceding gene: 66047496

Following gene: 66047486

Centisome position: 83.42

GC content: 60.0

Gene sequence:

>1665_bases
ATGGCTCAATACGTCTACACCATGCATCGGCTGAGCAAAGTTGTGCCGCCGAAGCGTGAAATCCTGAAAAACATCTCTCT
GTCTTTCTTCCCCGGTGCCAAGATCGGTGTGCTGGGCCTCAACGGTTCGGGTAAATCCACGCTGTTGAAAATCATGGCGG
GTGTCGACACCGAGTTCGATGGCGAAGCACGTCCGATGCCGGAGCTCAATGTGGGTTATCTGCCGCAGGAGCCACAACTT
GATCCGAACAAGACGGTCCGTGAGGTCGTGGAAGAGGCGGTCAGCGTGATCAAGGACGCCCAGGCGCGTCTCGATCAGGT
CTACGCCGAATACGCCGAGCCGGACGCTGATTTCGACAAGCTGGCGGCCGAGCAGGCCAAGCTCGAATCCATCCTGCAGG
CCAGCGATGGCCATAACCTGGAGCGTCAGCTGGAAGTCGCCGCCGACGCGCTGCGCCTGCCGGCCTGGGATGCGAAGGTT
TCGGTCCTTTCCGGTGGTGAGAAGCGCCGTGTCGCGCTGTGCCGCCTGCTGCTCTCCGCACCGGACATGCTGCTCCTCGA
CGAACCGACCAACCACCTGGATGCCGACTCGGTCGCCTGGCTGGAGCATTTCCTCCACGACTTCCCGGGTACTGTGGTTG
CGATCACGCACGACCGTTACTTCCTGGACAACGTGGCTGGCTGGATTCTGGAACTCGACCGCGGCGCCGGTATTCCTTAC
GAGGGCAACTATTCCGGCTGGCTTGAAGCCAAGTCCGACCGTCTGGCGCAGGAATCCAAGCAGCAGACCGCGCACGAAAA
AGCCATGAAAGACGAGCTGGAATGGGTCCGCAAGGGTGCCAAGGCGCGTCAGTCCAAATCCAAGGCGCGTCTGCAACGTT
TCGAAGAAATGCAGTCGCAGGAATTCCAGAAGCGCAGCGAGACCAACGAGATTTACATCCCTGCCGGTCCGCGTCTGGGC
GACAAGGTTATCGAGTTCAAGAACGTCACCAAGGGCTATGGCGACCGCGTGCTGATCGACAACCTGTCGTTCTCCATGCC
CAAAGGCGCCATCGTTGGCGTGATCGGCGGTAACGGTGCCGGTAAGTCGACATTGTTCCGCATGCTGATGGGCAAGGAGC
AGCCGGATTCGGGCAGCATCGAAGTCGGTGAAACCGTGCAGCTGGCCTGTGTGGACCAGAGCCGTGATGACCTGGACGGC
AGCAAGTCGGTGTTCCAGGCTGTGTCCGACGGCTCCGATGTGATCCGTATCGGTAACTATGAGATTCCGTCGCGTACCTA
CGTCGGTCGCTTCAACTTCAAGGGCGGCGATCAGCAGAAGTTCGTCAAGGACCTGTCCGGTGGTGAGCGTGGTCGTCTGC
ACCTGGCGCTGACCCTGAAAGAGGGCGGCAACGTGCTGCTGCTCGACGAACCGTCCAACGACCTCGACGTGGAAACCCTG
CGTTCACTGGAGGAAGCGCTGCTGGACTTCCCGGGCGCTGCCATTGTGATCTCTCACGATCGGTGGTTCCTTGACCGTGT
AGCCACGCACATCCTGGCGTACGAAGACGATTCGCAAGCCATCTTCTTCGAAGGCAACTACACCGAGTATGAAGCCGATC
GCAAGAAGCGTCTGGGCGAAGCGGCTGCCCAGCCGCATCGTGTGCGTCACAAAAAGCTGGCCTGA

Upstream 100 bases:

>100_bases
CCGCGGCAAGTCTCAAGGACAAATAAAAGCTTTTTTCCGGCCGGAGCTTTAAGCTCGTTACCCAAATCGGCCCTCATTAC
AGACGCTAGGTTTTCATTTC

Downstream 100 bases:

>100_bases
TCAGCGTTCAGGCACGCGCCGCTCCTTGCAAGGAGCGGCGCTGCCGTTGGCTGGCCTGGCTCACGCGTCAGGTTCGATCA
GCAGCACTTCAATCGACTGA

Product: putative ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 554; Mature: 553

Protein sequence:

>554_residues
MAQYVYTMHRLSKVVPPKREILKNISLSFFPGAKIGVLGLNGSGKSTLLKIMAGVDTEFDGEARPMPELNVGYLPQEPQL
DPNKTVREVVEEAVSVIKDAQARLDQVYAEYAEPDADFDKLAAEQAKLESILQASDGHNLERQLEVAADALRLPAWDAKV
SVLSGGEKRRVALCRLLLSAPDMLLLDEPTNHLDADSVAWLEHFLHDFPGTVVAITHDRYFLDNVAGWILELDRGAGIPY
EGNYSGWLEAKSDRLAQESKQQTAHEKAMKDELEWVRKGAKARQSKSKARLQRFEEMQSQEFQKRSETNEIYIPAGPRLG
DKVIEFKNVTKGYGDRVLIDNLSFSMPKGAIVGVIGGNGAGKSTLFRMLMGKEQPDSGSIEVGETVQLACVDQSRDDLDG
SKSVFQAVSDGSDVIRIGNYEIPSRTYVGRFNFKGGDQQKFVKDLSGGERGRLHLALTLKEGGNVLLLDEPSNDLDVETL
RSLEEALLDFPGAAIVISHDRWFLDRVATHILAYEDDSQAIFFEGNYTEYEADRKKRLGEAAAQPHRVRHKKLA

Sequences:

>Translated_554_residues
MAQYVYTMHRLSKVVPPKREILKNISLSFFPGAKIGVLGLNGSGKSTLLKIMAGVDTEFDGEARPMPELNVGYLPQEPQL
DPNKTVREVVEEAVSVIKDAQARLDQVYAEYAEPDADFDKLAAEQAKLESILQASDGHNLERQLEVAADALRLPAWDAKV
SVLSGGEKRRVALCRLLLSAPDMLLLDEPTNHLDADSVAWLEHFLHDFPGTVVAITHDRYFLDNVAGWILELDRGAGIPY
EGNYSGWLEAKSDRLAQESKQQTAHEKAMKDELEWVRKGAKARQSKSKARLQRFEEMQSQEFQKRSETNEIYIPAGPRLG
DKVIEFKNVTKGYGDRVLIDNLSFSMPKGAIVGVIGGNGAGKSTLFRMLMGKEQPDSGSIEVGETVQLACVDQSRDDLDG
SKSVFQAVSDGSDVIRIGNYEIPSRTYVGRFNFKGGDQQKFVKDLSGGERGRLHLALTLKEGGNVLLLDEPSNDLDVETL
RSLEEALLDFPGAAIVISHDRWFLDRVATHILAYEDDSQAIFFEGNYTEYEADRKKRLGEAAAQPHRVRHKKLA
>Mature_553_residues
AQYVYTMHRLSKVVPPKREILKNISLSFFPGAKIGVLGLNGSGKSTLLKIMAGVDTEFDGEARPMPELNVGYLPQEPQLD
PNKTVREVVEEAVSVIKDAQARLDQVYAEYAEPDADFDKLAAEQAKLESILQASDGHNLERQLEVAADALRLPAWDAKVS
VLSGGEKRRVALCRLLLSAPDMLLLDEPTNHLDADSVAWLEHFLHDFPGTVVAITHDRYFLDNVAGWILELDRGAGIPYE
GNYSGWLEAKSDRLAQESKQQTAHEKAMKDELEWVRKGAKARQSKSKARLQRFEEMQSQEFQKRSETNEIYIPAGPRLGD
KVIEFKNVTKGYGDRVLIDNLSFSMPKGAIVGVIGGNGAGKSTLFRMLMGKEQPDSGSIEVGETVQLACVDQSRDDLDGS
KSVFQAVSDGSDVIRIGNYEIPSRTYVGRFNFKGGDQQKFVKDLSGGERGRLHLALTLKEGGNVLLLDEPSNDLDVETLR
SLEEALLDFPGAAIVISHDRWFLDRVATHILAYEDDSQAIFFEGNYTEYEADRKKRLGEAAAQPHRVRHKKLA

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI27881506, Length=550, Percent_Identity=30.1818181818182, Blast_Score=180, Evalue=3e-45,
Organism=Homo sapiens, GI10947137, Length=550, Percent_Identity=30.1818181818182, Blast_Score=180, Evalue=4e-45,
Organism=Homo sapiens, GI148612853, Length=525, Percent_Identity=28.3809523809524, Blast_Score=179, Evalue=9e-45,
Organism=Homo sapiens, GI10947135, Length=550, Percent_Identity=27.6363636363636, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI69354671, Length=550, Percent_Identity=27.6363636363636, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI9955968, Length=230, Percent_Identity=28.695652173913, Blast_Score=67, Evalue=4e-11,
Organism=Homo sapiens, GI9955966, Length=230, Percent_Identity=28.695652173913, Blast_Score=67, Evalue=5e-11,
Organism=Homo sapiens, GI45243524, Length=230, Percent_Identity=28.695652173913, Blast_Score=67, Evalue=5e-11,
Organism=Escherichia coli, GI2367384, Length=554, Percent_Identity=72.3826714801444, Blast_Score=848, Evalue=0.0,
Organism=Escherichia coli, GI1787182, Length=517, Percent_Identity=33.6557059961315, Blast_Score=259, Evalue=2e-70,
Organism=Escherichia coli, GI1789751, Length=526, Percent_Identity=32.8897338403042, Blast_Score=242, Evalue=4e-65,
Organism=Escherichia coli, GI1787041, Length=522, Percent_Identity=31.992337164751, Blast_Score=236, Evalue=3e-63,
Organism=Escherichia coli, GI48994943, Length=475, Percent_Identity=24.4210526315789, Blast_Score=94, Evalue=3e-20,
Organism=Escherichia coli, GI87081709, Length=193, Percent_Identity=30.5699481865285, Blast_Score=86, Evalue=8e-18,
Organism=Escherichia coli, GI87081791, Length=229, Percent_Identity=28.3842794759825, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1788761, Length=231, Percent_Identity=29.4372294372294, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI1788897, Length=227, Percent_Identity=29.9559471365639, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI1786398, Length=211, Percent_Identity=31.2796208530806, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1786975, Length=347, Percent_Identity=25.0720461095101, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1786345, Length=185, Percent_Identity=31.3513513513514, Blast_Score=70, Evalue=5e-13,
Organism=Escherichia coli, GI1788225, Length=213, Percent_Identity=24.8826291079812, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1787164, Length=183, Percent_Identity=27.3224043715847, Blast_Score=65, Evalue=9e-12,
Organism=Escherichia coli, GI1790467, Length=226, Percent_Identity=29.646017699115, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1788165, Length=185, Percent_Identity=28.1081081081081, Blast_Score=64, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=564, Percent_Identity=27.8368794326241, Blast_Score=198, Evalue=5e-51,
Organism=Caenorhabditis elegans, GI17555318, Length=541, Percent_Identity=27.5415896487985, Blast_Score=174, Evalue=1e-43,
Organism=Caenorhabditis elegans, GI17553372, Length=540, Percent_Identity=28.7037037037037, Blast_Score=166, Evalue=4e-41,
Organism=Saccharomyces cerevisiae, GI6320874, Length=529, Percent_Identity=28.7334593572779, Blast_Score=192, Evalue=1e-49,
Organism=Saccharomyces cerevisiae, GI6321121, Length=537, Percent_Identity=27.0018621973929, Blast_Score=184, Evalue=3e-47,
Organism=Saccharomyces cerevisiae, GI6323278, Length=393, Percent_Identity=25.1908396946565, Blast_Score=106, Evalue=1e-23,
Organism=Saccharomyces cerevisiae, GI6324314, Length=376, Percent_Identity=26.063829787234, Blast_Score=101, Evalue=3e-22,
Organism=Saccharomyces cerevisiae, GI6325030, Length=380, Percent_Identity=26.5789473684211, Blast_Score=98, Evalue=4e-21,
Organism=Saccharomyces cerevisiae, GI6320266, Length=497, Percent_Identity=22.3340040241449, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24642252, Length=551, Percent_Identity=29.2196007259528, Blast_Score=194, Evalue=1e-49,
Organism=Drosophila melanogaster, GI18859989, Length=551, Percent_Identity=29.2196007259528, Blast_Score=194, Evalue=1e-49,
Organism=Drosophila melanogaster, GI24641342, Length=558, Percent_Identity=27.4193548387097, Blast_Score=178, Evalue=8e-45,
Organism=Drosophila melanogaster, GI24666836, Length=533, Percent_Identity=27.3921200750469, Blast_Score=174, Evalue=2e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022374
- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 61557; Mature: 61426

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQYVYTMHRLSKVVPPKREILKNISLSFFPGAKIGVLGLNGSGKSTLLKIMAGVDTEFD
CCHHHHHHHHHHHHCCCHHHHHHHCCCEECCCCEEEEEEECCCCHHHHHHHHHCCCCCCC
GEARPMPELNVGYLPQEPQLDPNKTVREVVEEAVSVIKDAQARLDQVYAEYAEPDADFDK
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LAAEQAKLESILQASDGHNLERQLEVAADALRLPAWDAKVSVLSGGEKRRVALCRLLLSA
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCC
PDMLLLDEPTNHLDADSVAWLEHFLHDFPGTVVAITHDRYFLDNVAGWILELDRGAGIPY
CCEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHEEECCCCCCCC
EGNYSGWLEAKSDRLAQESKQQTAHEKAMKDELEWVRKGAKARQSKSKARLQRFEEMQSQ
CCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EFQKRSETNEIYIPAGPRLGDKVIEFKNVTKGYGDRVLIDNLSFSMPKGAIVGVIGGNGA
HHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEECCCCC
GKSTLFRMLMGKEQPDSGSIEVGETVQLACVDQSRDDLDGSKSVFQAVSDGSDVIRIGNY
CHHHHHHHHHCCCCCCCCCEEECCEEEEEEECCCCCCCCCHHHHHHHHCCCCCEEEECCE
EIPSRTYVGRFNFKGGDQQKFVKDLSGGERGRLHLALTLKEGGNVLLLDEPSNDLDVETL
ECCCCEEEEEECCCCCCHHHHHHHHCCCCCCEEEEEEEEECCCCEEEEECCCCCCCHHHH
RSLEEALLDFPGAAIVISHDRWFLDRVATHILAYEDDSQAIFFEGNYTEYEADRKKRLGE
HHHHHHHHCCCCCEEEEECCHHHHHHHHHHHEEEECCCCEEEEECCCCHHHHHHHHHHHH
AAAQPHRVRHKKLA
HHCCCHHHHHHCCC
>Mature Secondary Structure 
AQYVYTMHRLSKVVPPKREILKNISLSFFPGAKIGVLGLNGSGKSTLLKIMAGVDTEFD
CHHHHHHHHHHHHCCCHHHHHHHCCCEECCCCEEEEEEECCCCHHHHHHHHHCCCCCCC
GEARPMPELNVGYLPQEPQLDPNKTVREVVEEAVSVIKDAQARLDQVYAEYAEPDADFDK
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LAAEQAKLESILQASDGHNLERQLEVAADALRLPAWDAKVSVLSGGEKRRVALCRLLLSA
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCC
PDMLLLDEPTNHLDADSVAWLEHFLHDFPGTVVAITHDRYFLDNVAGWILELDRGAGIPY
CCEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHEEECCCCCCCC
EGNYSGWLEAKSDRLAQESKQQTAHEKAMKDELEWVRKGAKARQSKSKARLQRFEEMQSQ
CCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EFQKRSETNEIYIPAGPRLGDKVIEFKNVTKGYGDRVLIDNLSFSMPKGAIVGVIGGNGA
HHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEECCCCC
GKSTLFRMLMGKEQPDSGSIEVGETVQLACVDQSRDDLDGSKSVFQAVSDGSDVIRIGNY
CHHHHHHHHHCCCCCCCCCEEECCEEEEEEECCCCCCCCCHHHHHHHHCCCCCEEEECCE
EIPSRTYVGRFNFKGGDQQKFVKDLSGGERGRLHLALTLKEGGNVLLLDEPSNDLDVETL
ECCCCEEEEEECCCCCCHHHHHHHHCCCCCCEEEEEEEEECCCCEEEEECCCCCCCHHHH
RSLEEALLDFPGAAIVISHDRWFLDRVATHILAYEDDSQAIFFEGNYTEYEADRKKRLGE
HHHHHHHHCCCCCEEEEECCHHHHHHHHHHHEEEECCCCEEEEECCCCHHHHHHHHHHHH
AAAQPHRVRHKKLA
HHCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]