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The map label for this gene is ycbZ [H]

Identifier: 66047486

GI number: 66047486

Start: 5075180

End: 5077615

Strand: Reverse

Name: ycbZ [H]

Synonym: Psyr_4259

Alternate gene names: 66047486

Gene position: 5077615-5075180 (Counterclockwise)

Preceding gene: 66047491

Following gene: 66047485

Centisome position: 83.33

GC content: 62.03

Gene sequence:

>2436_bases
ATGCCCGATTCTGTCGCAGCCAACCTACGCCTGGCGCCCAACGCGCTGACCCGTCCGTTTTCCGCTGAGCAGTTCAGCTT
TGCGACCACCCACGAGCTCGAACCCTTTCGCGGTGTCCTTGGCCAGGAGAGAGCCGTAGAGGCCCTGCAGTTCGGCGTTG
CCATGCCGCGCCCCGGTTACAACGTGTTTGTCATGGGCGAGCCCGGCACCGGGCGCTTTTCGTTCGTCAAACGCTACCTC
AAGGCCGAAGGCAAGCGGATGCAGACGCCGTCGGACTGGGTCTACGTCAACAACTTCGACGAGCCCCGCGAACCCAAGGC
GCTGGAGCTGCCACCAGGTACTGCTCATGAGTTCACCGCCGACATCGGCGGTCTGATCGACAACCTGCTGGTGACCTTCC
CGGCGGTTTTCGAGCACCCCTCGTATCAGCAGAAGAAAAGCTCGATCGACCGTGCGTTCAATCAGCGCTACGACCGTGCT
CTTGATGTCATCGAGCGCCTGTCGCTGGAGAAAGACATCGCGCTGTATCGCGACAGCTCGAACATCGCGTTCACGCCGAT
GGCCGACGGCAAGGCGCTGGACGAGGCCGAGTTTTCGCAGCTGCCCGAAGCGGATCGCGAGCGTTTTCACGAAGATATCT
CCGCGCTCGAGGAGCGTCTCAACGAAGAGCTGGCCAGCCTGCCGCAGTGGAAGCGCGAGTCCAACAATCAGCTGCGTCAG
TTGAATGAAGAAACCATCACCCTGACCCTGCAACCCTTGCTGGCACCGCTTTCGGAAAAGTACGCCGAGAACGCTGCGGT
CTGCGCCTACCTGCAGGCCATGCAGGTGTACCTGCTCAAGACGCTGGTCGAGCAGTTGGTCGATGATGCCAAGACCGATG
CCCAGGCGCGCAAGCTGCTGGAAGAGCAGTACAGCCCGAGTCTGGTGGTCGGGAATACCCGTGATGGCGGTGCGCCGGTG
GTTTTCGAACAACACCCCACCTATGACAACCTGTTCGGGCGCATCGAATACAGCACCGATCAGGGCGCGCTGTACACCAC
GTATCGGCAACTGCGCCCCGGCGCGCTGCATCGCGCCAACGGCGGTTTCCTGATTCTGGAAGCCGAGAAGATGCTCGGCG
AGCCGTTCGTCTGGGATGCGCTCAAGCGTACCCTGCAATCGCGCAAGCTGAAGATGGAGTCGCCGCTGGGCGAGCTCGGC
CGTGTTGCCACCGTGAGCCTGACGCCGCAAGTGATTCCGTGGAACGTCAAAATCATCATCATCGGTTCGCGTTCGCTGTA
CTACACCCTGCAAGACCTCGATCCTGACTTCCAGGAGATGTTCCGGGTGCTGGTCGACTTCGATGAAGAGATTCCGATGG
TCGATGAAACGCTCGAGCAGTTCGCTCAGTTGCTCAAGACCCGGACCTCGGAGGAGGGCATGGCACCTCTGACCGCTGAC
GCGGTGGCACGACTGGCGACTTACAGCGCCCGCTTGGCCGAGCATCAGGGGCGTTTGTCGGCGCGTATCGGCGACCTGTT
CCAGCTGGTCAGCGAGGCCGATTTCATCCGCCAGCTGGCCAACGACGACAAGACCGACGCCGGGCATATCGAGCGTGCGC
TCAAGGCCAAGGCCACCCGTACCGGGCGAGTTTCGGCGCGGATTCTCGATGACATGATGGCTGGCGTGATCCTGATCGAC
ACTGACGGCGCGGCAGTCGGCAAGTGCAACGGCCTGACGGTTCTGGAGGTTGGTGACTCGGCCTTCGGCGTGCCCGCGCG
CATTTCCGCCACGGTTTACCCGGGCGGCAGCGGGATCGTCGACATCGAGCGCGAGGTCAACCTTGGCCAGCCGATCCACT
CCAAGGGCGTGATGATCCTTACCGGCTACCTCGGCAGCCGTTATGCCCAGGAATTCCCGCTGGCGATTTCCGCGAGTATC
GCCCTTGAGCAGTCCTACGGTTACGTGGACGGCGACAGTGCGTCGCTGGGCGAGGTCTGCACGCTGATCTCGGCGCTGTC
ACGCACGCCACTCAAGCAGTGCTTCGCGATTACCGGCTCGATCAACCAGTTTGGCGAAGTTCAGGCGGTGGGCGGGGTCA
ATGAAAAGATCGAGGGCTTCTTCCGCCTCTGCGAAGCACGTGGGCTGACCGGTGAGCAGGGTGCGATCATTCCGCACGCC
AACGTCACCACGCTGATGCTGGATGAGCGTGTGGTACAGGCTGTTCGTGCCGGGCAATTCCACATCTACGCAGTACGTCA
GGCCGATGAGGCGCTGAGCCTGCTGGTGGGCGAACCTGCCGGTGCGCCCGACGAGCATGGCGAATTCCCTGAGGGCAGCG
TCAATGCGCGTGTCGTGGAGCGTCTGCGCGATATCGCAGAGATGCTCAGCGACGAAGACCTCAAGGAAGAGCTGGAAAAG
GAGCCTGCGCAGTTGCAGCCTGAACTCAAGGTCTGA

Upstream 100 bases:

>100_bases
GCAGTCACGCAAATGCTTTTCGATTCTTTCCTGCCTTGCAAGTCGTGTACAGCGAGCGCCAGAATGCCGACATCTGCCCC
GCCTGATGTAAGGATTACTG

Downstream 100 bases:

>100_bases
ATGCGCAGGAACCGGGCGGTGCCAAACCGTCCGGTGCTCCGTTCATCAGAGATGGTTTCTCGCCGGGTGGTTTTCTTCTA
GTCTTGAGGTGATCGCAGTG

Product: ATP-dependent protease, putative

Products: NA

Alternate protein names: ATP-dependent protease La homolog [H]

Number of amino acids: Translated: 811; Mature: 810

Protein sequence:

>811_residues
MPDSVAANLRLAPNALTRPFSAEQFSFATTHELEPFRGVLGQERAVEALQFGVAMPRPGYNVFVMGEPGTGRFSFVKRYL
KAEGKRMQTPSDWVYVNNFDEPREPKALELPPGTAHEFTADIGGLIDNLLVTFPAVFEHPSYQQKKSSIDRAFNQRYDRA
LDVIERLSLEKDIALYRDSSNIAFTPMADGKALDEAEFSQLPEADRERFHEDISALEERLNEELASLPQWKRESNNQLRQ
LNEETITLTLQPLLAPLSEKYAENAAVCAYLQAMQVYLLKTLVEQLVDDAKTDAQARKLLEEQYSPSLVVGNTRDGGAPV
VFEQHPTYDNLFGRIEYSTDQGALYTTYRQLRPGALHRANGGFLILEAEKMLGEPFVWDALKRTLQSRKLKMESPLGELG
RVATVSLTPQVIPWNVKIIIIGSRSLYYTLQDLDPDFQEMFRVLVDFDEEIPMVDETLEQFAQLLKTRTSEEGMAPLTAD
AVARLATYSARLAEHQGRLSARIGDLFQLVSEADFIRQLANDDKTDAGHIERALKAKATRTGRVSARILDDMMAGVILID
TDGAAVGKCNGLTVLEVGDSAFGVPARISATVYPGGSGIVDIEREVNLGQPIHSKGVMILTGYLGSRYAQEFPLAISASI
ALEQSYGYVDGDSASLGEVCTLISALSRTPLKQCFAITGSINQFGEVQAVGGVNEKIEGFFRLCEARGLTGEQGAIIPHA
NVTTLMLDERVVQAVRAGQFHIYAVRQADEALSLLVGEPAGAPDEHGEFPEGSVNARVVERLRDIAEMLSDEDLKEELEK
EPAQLQPELKV

Sequences:

>Translated_811_residues
MPDSVAANLRLAPNALTRPFSAEQFSFATTHELEPFRGVLGQERAVEALQFGVAMPRPGYNVFVMGEPGTGRFSFVKRYL
KAEGKRMQTPSDWVYVNNFDEPREPKALELPPGTAHEFTADIGGLIDNLLVTFPAVFEHPSYQQKKSSIDRAFNQRYDRA
LDVIERLSLEKDIALYRDSSNIAFTPMADGKALDEAEFSQLPEADRERFHEDISALEERLNEELASLPQWKRESNNQLRQ
LNEETITLTLQPLLAPLSEKYAENAAVCAYLQAMQVYLLKTLVEQLVDDAKTDAQARKLLEEQYSPSLVVGNTRDGGAPV
VFEQHPTYDNLFGRIEYSTDQGALYTTYRQLRPGALHRANGGFLILEAEKMLGEPFVWDALKRTLQSRKLKMESPLGELG
RVATVSLTPQVIPWNVKIIIIGSRSLYYTLQDLDPDFQEMFRVLVDFDEEIPMVDETLEQFAQLLKTRTSEEGMAPLTAD
AVARLATYSARLAEHQGRLSARIGDLFQLVSEADFIRQLANDDKTDAGHIERALKAKATRTGRVSARILDDMMAGVILID
TDGAAVGKCNGLTVLEVGDSAFGVPARISATVYPGGSGIVDIEREVNLGQPIHSKGVMILTGYLGSRYAQEFPLAISASI
ALEQSYGYVDGDSASLGEVCTLISALSRTPLKQCFAITGSINQFGEVQAVGGVNEKIEGFFRLCEARGLTGEQGAIIPHA
NVTTLMLDERVVQAVRAGQFHIYAVRQADEALSLLVGEPAGAPDEHGEFPEGSVNARVVERLRDIAEMLSDEDLKEELEK
EPAQLQPELKV
>Mature_810_residues
PDSVAANLRLAPNALTRPFSAEQFSFATTHELEPFRGVLGQERAVEALQFGVAMPRPGYNVFVMGEPGTGRFSFVKRYLK
AEGKRMQTPSDWVYVNNFDEPREPKALELPPGTAHEFTADIGGLIDNLLVTFPAVFEHPSYQQKKSSIDRAFNQRYDRAL
DVIERLSLEKDIALYRDSSNIAFTPMADGKALDEAEFSQLPEADRERFHEDISALEERLNEELASLPQWKRESNNQLRQL
NEETITLTLQPLLAPLSEKYAENAAVCAYLQAMQVYLLKTLVEQLVDDAKTDAQARKLLEEQYSPSLVVGNTRDGGAPVV
FEQHPTYDNLFGRIEYSTDQGALYTTYRQLRPGALHRANGGFLILEAEKMLGEPFVWDALKRTLQSRKLKMESPLGELGR
VATVSLTPQVIPWNVKIIIIGSRSLYYTLQDLDPDFQEMFRVLVDFDEEIPMVDETLEQFAQLLKTRTSEEGMAPLTADA
VARLATYSARLAEHQGRLSARIGDLFQLVSEADFIRQLANDDKTDAGHIERALKAKATRTGRVSARILDDMMAGVILIDT
DGAAVGKCNGLTVLEVGDSAFGVPARISATVYPGGSGIVDIEREVNLGQPIHSKGVMILTGYLGSRYAQEFPLAISASIA
LEQSYGYVDGDSASLGEVCTLISALSRTPLKQCFAITGSINQFGEVQAVGGVNEKIEGFFRLCEARGLTGEQGAIIPHAN
VTTLMLDERVVQAVRAGQFHIYAVRQADEALSLLVGEPAGAPDEHGEFPEGSVNARVVERLRDIAEMLSDEDLKEELEKE
PAQLQPELKV

Specific function: Unknown

COG id: COG1067

COG function: function code O; Predicted ATP-dependent protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S16 family [H]

Homologues:

Organism=Escherichia coli, GI1787188, Length=410, Percent_Identity=36.8292682926829, Blast_Score=256, Evalue=5e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008269
- InterPro:   IPR001984
- InterPro:   IPR020568 [H]

Pfam domain/function: PF05362 Lon_C [H]

EC number: 3.4.21.- [C]

Molecular weight: Translated: 89638; Mature: 89506

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDSVAANLRLAPNALTRPFSAEQFSFATTHELEPFRGVLGQERAVEALQFGVAMPRPGY
CCCCCCCCEEECCHHHCCCCCCCCCCCCHHCCCCHHHHHCCHHHHHHHHHHCCCCCCCCC
NVFVMGEPGTGRFSFVKRYLKAEGKRMQTPSDWVYVNNFDEPREPKALELPPGTAHEFTA
EEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCEEECCCCCCHHHHH
DIGGLIDNLLVTFPAVFEHPSYQQKKSSIDRAFNQRYDRALDVIERLSLEKDIALYRDSS
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC
NIAFTPMADGKALDEAEFSQLPEADRERFHEDISALEERLNEELASLPQWKRESNNQLRQ
CEEEEECCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHH
LNEETITLTLQPLLAPLSEKYAENAAVCAYLQAMQVYLLKTLVEQLVDDAKTDAQARKLL
CCCCEEEEEHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
EEQYSPSLVVGNTRDGGAPVVFEQHPTYDNLFGRIEYSTDQGALYTTYRQLRPGALHRAN
HHHCCCCEEEECCCCCCCCEEECCCCCHHHHCEEEEECCCCCCHHHHHHHHCCCCCEECC
GGFLILEAEKMLGEPFVWDALKRTLQSRKLKMESPLGELGRVATVSLTPQVIPWNVKIII
CCEEEEECHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHCCEEEEEECCEEECEEEEEEE
IGSRSLYYTLQDLDPDFQEMFRVLVDFDEEIPMVDETLEQFAQLLKTRTSEEGMAPLTAD
EECCCEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHH
AVARLATYSARLAEHQGRLSARIGDLFQLVSEADFIRQLANDDKTDAGHIERALKAKATR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
TGRVSARILDDMMAGVILIDTDGAAVGKCNGLTVLEVGDSAFGVPARISATVYPGGSGIV
CCCHHHHHHHHHHCCEEEEECCCCCEECCCCEEEEEECCCCCCCCCEEEEEEECCCCCEE
DIEREVNLGQPIHSKGVMILTGYLGSRYAQEFPLAISASIALEQSYGYVDGDSASLGEVC
EEECCCCCCCCCCCCCEEEEEECHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCHHHHH
TLISALSRTPLKQCFAITGSINQFGEVQAVGGVNEKIEGFFRLCEARGLTGEQGAIIPHA
HHHHHHHCCHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCCEECCC
NVTTLMLDERVVQAVRAGQFHIYAVRQADEALSLLVGEPAGAPDEHGEFPEGSVNARVVE
CCEEEHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
RLRDIAEMLSDEDLKEELEKEPAQLQPELKV
HHHHHHHHHCCCHHHHHHHCCHHHCCCCCCC
>Mature Secondary Structure 
PDSVAANLRLAPNALTRPFSAEQFSFATTHELEPFRGVLGQERAVEALQFGVAMPRPGY
CCCCCCCEEECCHHHCCCCCCCCCCCCHHCCCCHHHHHCCHHHHHHHHHHCCCCCCCCC
NVFVMGEPGTGRFSFVKRYLKAEGKRMQTPSDWVYVNNFDEPREPKALELPPGTAHEFTA
EEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCEEECCCCCCHHHHH
DIGGLIDNLLVTFPAVFEHPSYQQKKSSIDRAFNQRYDRALDVIERLSLEKDIALYRDSS
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC
NIAFTPMADGKALDEAEFSQLPEADRERFHEDISALEERLNEELASLPQWKRESNNQLRQ
CEEEEECCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHH
LNEETITLTLQPLLAPLSEKYAENAAVCAYLQAMQVYLLKTLVEQLVDDAKTDAQARKLL
CCCCEEEEEHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
EEQYSPSLVVGNTRDGGAPVVFEQHPTYDNLFGRIEYSTDQGALYTTYRQLRPGALHRAN
HHHCCCCEEEECCCCCCCCEEECCCCCHHHHCEEEEECCCCCCHHHHHHHHCCCCCEECC
GGFLILEAEKMLGEPFVWDALKRTLQSRKLKMESPLGELGRVATVSLTPQVIPWNVKIII
CCEEEEECHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHCCEEEEEECCEEECEEEEEEE
IGSRSLYYTLQDLDPDFQEMFRVLVDFDEEIPMVDETLEQFAQLLKTRTSEEGMAPLTAD
EECCCEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHH
AVARLATYSARLAEHQGRLSARIGDLFQLVSEADFIRQLANDDKTDAGHIERALKAKATR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
TGRVSARILDDMMAGVILIDTDGAAVGKCNGLTVLEVGDSAFGVPARISATVYPGGSGIV
CCCHHHHHHHHHHCCEEEEECCCCCEECCCCEEEEEECCCCCCCCCEEEEEEECCCCCEE
DIEREVNLGQPIHSKGVMILTGYLGSRYAQEFPLAISASIALEQSYGYVDGDSASLGEVC
EEECCCCCCCCCCCCCEEEEEECHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCHHHHH
TLISALSRTPLKQCFAITGSINQFGEVQAVGGVNEKIEGFFRLCEARGLTGEQGAIIPHA
HHHHHHHCCHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCCEECCC
NVTTLMLDERVVQAVRAGQFHIYAVRQADEALSLLVGEPAGAPDEHGEFPEGSVNARVVE
CCEEEHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
RLRDIAEMLSDEDLKEELEKEPAQLQPELKV
HHHHHHHHHCCCHHHHHHHCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]