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The map label for this gene is dppC [H]

Identifier: 66047441

GI number: 66047441

Start: 5019521

End: 5020384

Strand: Reverse

Name: dppC [H]

Synonym: Psyr_4214

Alternate gene names: 66047441

Gene position: 5020384-5019521 (Counterclockwise)

Preceding gene: 66047442

Following gene: 66047440

Centisome position: 82.39

GC content: 62.04

Gene sequence:

>864_bases
ATGACCGTGGCCCATGCCGATCTTCGTCCGCACTGGCGTTCCCGGCTGCGCCTGCGTTTGCGCAATGGCCGGCTGGCGAT
GCTGCTGGGCGGCTCTTTATTGGGCGGGTGGCTGATATTGGCGCTGTTTGCGCCATGGCTGGCACCTTACGATCCGATCT
ACCAGAACACCGAGCTGCGCATGCTCGCGCCGCACCTCGCGCATCCGTTCGGCACCGACAATTTCGGTCGCGACATTCTG
TCCAGAGTGATCTGGGCGGCACGCGTCGATCTGCAGATCTGCGTGATCGGGGTGATCTTCCCGTTCATGATCGGGACCTT
CGTCGGCGCCTTGTCGGGCTACATCGGCGGACGCTTCGACAACCTGTGCATGCGCGTGATCGACATCGTGCTGGCGTTCC
CGTTTCTGGTGCTGATGCTGGCGATCATCGCGATTCTCGGGCCAGGCCTGGGCAGCTTCTACATCGCCATGGCACTGGTG
GGCTGGGTGTCTTATGCGCGGCTGATCCGCTCACAGATTCTGGTGCTCAAGGAGAGCGATTTTGCCCTGGCAGCCAAAAG
CCTGGGTTTTGGTCACTTGCGTATCCTGTTCCGCCATCTGCTGCCCAACGCGATGTTCGGCTCGATTGTGTTTTCCATGT
CTGACGCGGTTCTGGTGTTGCTCAGCGGCGCATCGGTCAGCTACCTGGGCCTGGGTGTGCAACCACCGATGGCGGAGTGG
GGGACGATGGTCGCCGAAGGGCAGGCGTTCCTCACCTCTGCGTGGTGGATCTGCACCTTTCCGGGCCTGGCCATCGTGAC
GTTGGCTATGGGCTTCAGCCTGTTGGCGGACGGCGTCGCCGAAACCCTGGGAGAACGGCAATGA

Upstream 100 bases:

>100_bases
TGGTGCAGGGGGTGGCCATGGTGCTGGCCTGTGCCACGGTGATCGTGAACTTCCTGGCCGATGTGGCCACGGTGGCCATT
GACCCGCGGGTGAATATCAA

Downstream 100 bases:

>100_bases
GTACGCCCGTGCTGCAGGTCAGCGAGATGAGCGTGGTGGCGAGCCATCGTGGCCGCGAAGTGACGCTGGTCGACCGGTTG
TCGTTCGACCTGCACCAGGG

Product: binding-protein dependent transport system inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MTVAHADLRPHWRSRLRLRLRNGRLAMLLGGSLLGGWLILALFAPWLAPYDPIYQNTELRMLAPHLAHPFGTDNFGRDIL
SRVIWAARVDLQICVIGVIFPFMIGTFVGALSGYIGGRFDNLCMRVIDIVLAFPFLVLMLAIIAILGPGLGSFYIAMALV
GWVSYARLIRSQILVLKESDFALAAKSLGFGHLRILFRHLLPNAMFGSIVFSMSDAVLVLLSGASVSYLGLGVQPPMAEW
GTMVAEGQAFLTSAWWICTFPGLAIVTLAMGFSLLADGVAETLGERQ

Sequences:

>Translated_287_residues
MTVAHADLRPHWRSRLRLRLRNGRLAMLLGGSLLGGWLILALFAPWLAPYDPIYQNTELRMLAPHLAHPFGTDNFGRDIL
SRVIWAARVDLQICVIGVIFPFMIGTFVGALSGYIGGRFDNLCMRVIDIVLAFPFLVLMLAIIAILGPGLGSFYIAMALV
GWVSYARLIRSQILVLKESDFALAAKSLGFGHLRILFRHLLPNAMFGSIVFSMSDAVLVLLSGASVSYLGLGVQPPMAEW
GTMVAEGQAFLTSAWWICTFPGLAIVTLAMGFSLLADGVAETLGERQ
>Mature_286_residues
TVAHADLRPHWRSRLRLRLRNGRLAMLLGGSLLGGWLILALFAPWLAPYDPIYQNTELRMLAPHLAHPFGTDNFGRDILS
RVIWAARVDLQICVIGVIFPFMIGTFVGALSGYIGGRFDNLCMRVIDIVLAFPFLVLMLAIIAILGPGLGSFYIAMALVG
WVSYARLIRSQILVLKESDFALAAKSLGFGHLRILFRHLLPNAMFGSIVFSMSDAVLVLLSGASVSYLGLGVQPPMAEWG
TMVAEGQAFLTSAWWICTFPGLAIVTLAMGFSLLADGVAETLGERQ

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=282, Percent_Identity=37.9432624113475, Blast_Score=188, Evalue=4e-49,
Organism=Escherichia coli, GI1787054, Length=250, Percent_Identity=39.6, Blast_Score=182, Evalue=3e-47,
Organism=Escherichia coli, GI1789964, Length=255, Percent_Identity=38.4313725490196, Blast_Score=167, Evalue=1e-42,
Organism=Escherichia coli, GI1789889, Length=240, Percent_Identity=35.8333333333333, Blast_Score=152, Evalue=2e-38,
Organism=Escherichia coli, GI1787498, Length=257, Percent_Identity=31.5175097276265, Blast_Score=127, Evalue=8e-31,
Organism=Escherichia coli, GI1787549, Length=285, Percent_Identity=27.719298245614, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1788505, Length=192, Percent_Identity=27.0833333333333, Blast_Score=91, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31364; Mature: 31233

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVAHADLRPHWRSRLRLRLRNGRLAMLLGGSLLGGWLILALFAPWLAPYDPIYQNTELR
CCCCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
MLAPHLAHPFGTDNFGRDILSRVIWAARVDLQICVIGVIFPFMIGTFVGALSGYIGGRFD
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
NLCMRVIDIVLAFPFLVLMLAIIAILGPGLGSFYIAMALVGWVSYARLIRSQILVLKESD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC
FALAAKSLGFGHLRILFRHLLPNAMFGSIVFSMSDAVLVLLSGASVSYLGLGVQPPMAEW
HHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCCHHHH
GTMVAEGQAFLTSAWWICTFPGLAIVTLAMGFSLLADGVAETLGERQ
HHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TVAHADLRPHWRSRLRLRLRNGRLAMLLGGSLLGGWLILALFAPWLAPYDPIYQNTELR
CCCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
MLAPHLAHPFGTDNFGRDILSRVIWAARVDLQICVIGVIFPFMIGTFVGALSGYIGGRFD
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
NLCMRVIDIVLAFPFLVLMLAIIAILGPGLGSFYIAMALVGWVSYARLIRSQILVLKESD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC
FALAAKSLGFGHLRILFRHLLPNAMFGSIVFSMSDAVLVLLSGASVSYLGLGVQPPMAEW
HHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCCHHHH
GTMVAEGQAFLTSAWWICTFPGLAIVTLAMGFSLLADGVAETLGERQ
HHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]