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The map label for this gene is recN [H]

Identifier: 66047424

GI number: 66047424

Start: 4993564

End: 4995237

Strand: Direct

Name: recN [H]

Synonym: Psyr_4197

Alternate gene names: 66047424

Gene position: 4993564-4995237 (Clockwise)

Preceding gene: 66047416

Following gene: 66047426

Centisome position: 81.95

GC content: 61.35

Gene sequence:

>1674_bases
ATGCTGGTGCACCTTTCCGTACACAACTACGCCATTGTCGAACACCTTGATCTTGAACTGGATCGAGGCATGAGCGTCAT
CACCGGCGAAACCGGCGCTGGCAAGTCGATCATGCTCGACGCCCTGGGCCTGACCCTGGGCGACCGTGCCGACAGCGGCG
TGGTCAGGCCCGGCGCCGACAAGGCCGACATCCTGGCCACGTTCGACCTGGGCGACATTCCCGAGGCACAGACCTGGCTC
AAAGAGCGCGACCTGGACAACGACGGCCCCTGCATCCTGCGCCGGGTCATCACTGCCGAAGGTCGGTCACGCTCCTATAT
CAATGGCTCACCCTGCCCTCAGGGCGACCTGAAGGCGCTGGGCGAACTGCTCATCGATATTCACAGCCAGCATGAGCACC
AGTCGCTGCTCAAGACCGATACCCATCGGCGCCTGCTCGACGAATACGCGGGTGCAACCGATCTGGCCCGTCAGGTCCAT
CTCGCCGCGCAGCGCTGGCGGCAGACGCGGCAGGAGCTCGAGCGTCTTTCCAATTCGGGTGACGAGCAACGCGCACGGCA
TCAGTTACTGAGCTATCAGCTCGAAGAGCTGGAAAGCCTGAGCCTGGGCGAAAACGAGCTTGAACAGCTCGAACAGGAAC
ACAAGGACCTGACCAACGCCGAAAGCCTGCTGAGCATTTGCCGACAAGTGGTCGAGCAGTGCAGCGAAAGCGATTCCGGC
AACGTGCTCAATGCCCTGACCGCCAGCCTGCATCGTCTTGGCAGCGTCGACCATTCCCCGTCCGCCCTGAGCGAGGCCAC
AGGGCTGCTGTCCAGCGCGCAGATACAGGTAGAAGAAGCGGTAGGCGAGCTGAATCGCTTTTTGGATCACTTCGATGCCG
ACCCTGCCCGCCTGCAACAGCTTGAAGAACGTCTCGATGCCATTTACACACTGGCGCGCAAGCACCGCATCCAGCCAGGC
GAAGTGGCGACACTGCAACAAAAGCTGCTGGATGAAATAGAAACGCTGAATGCCAACGACGAATCCATCGAACGCCTGGA
GCATGAAGTGCAGGCATTCGCCCGGCACTATCAGGATAAAGCCCGTGAGCTGAGCGACCTGCGCCACAATTCGGCGACGA
AACTGGCCAGCGCTGTGGAACAGGAAATTCATCGTCTGGGCATGCCCGGCGGCCGTTTCCAGATCGACCTCAAAGCCAAC
GCCAGCGTAGAACCCTCGCCTCACGGCCTGGAGCAGGTGGAGCTACTGGTCAGCGCCAACCCCGGCCAACCACTGAAAGC
GCTGGCAAAAGTCGCGTCGGGGGGTGAACTGTCGCGCATCAGCCTGGCGATTCAGGTCATCACTGCGCAAACCTCGCGGG
TACCGACGCTGGTATTCGATGAAGTGGATGTGGGGATTGGCGGACCGACCGCCGAGATCGTAGGGCAGCTGCTGCGTCGC
CTGGGCGAGCGCGGTCAGGTCATGACCGTCACTCACCTGCCGCAGGTCGCGGCGCAGGGCCATCAGCACCTGTTCGTGCA
CAAGGTGCGCGACAACGACGCAACGCGCACAGCGGTGTCCAGGCTCAGCAAGACTGAACGTATAGAGGAAGTCGCCCGAA
TGCTGGGCGGCATCGATCTGACCAAGGAATCTCTGGCGCACGCCAAAAAGATGGTCGTTACGGCGAAAAGCTGA

Upstream 100 bases:

>100_bases
AAACCACTGCAGACCGATGAAATCGAGCTAAGCAAGGGCATTGTCAGCCACAAATAAAACACTGTATAAATAACCAGACA
AACAGCCCGGGAGCCGCTCA

Downstream 100 bases:

>100_bases
GCGATAGAACGCACAAAGGCGACCGCGGTCGCCCCTGTTGCTGATTACGCCTTCTTGTTGCGGACGTAAAGCACCAGATT
GTGGTCCACCAGGTCAAAGC

Product: DNA repair protein RecN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 557; Mature: 557

Protein sequence:

>557_residues
MLVHLSVHNYAIVEHLDLELDRGMSVITGETGAGKSIMLDALGLTLGDRADSGVVRPGADKADILATFDLGDIPEAQTWL
KERDLDNDGPCILRRVITAEGRSRSYINGSPCPQGDLKALGELLIDIHSQHEHQSLLKTDTHRRLLDEYAGATDLARQVH
LAAQRWRQTRQELERLSNSGDEQRARHQLLSYQLEELESLSLGENELEQLEQEHKDLTNAESLLSICRQVVEQCSESDSG
NVLNALTASLHRLGSVDHSPSALSEATGLLSSAQIQVEEAVGELNRFLDHFDADPARLQQLEERLDAIYTLARKHRIQPG
EVATLQQKLLDEIETLNANDESIERLEHEVQAFARHYQDKARELSDLRHNSATKLASAVEQEIHRLGMPGGRFQIDLKAN
ASVEPSPHGLEQVELLVSANPGQPLKALAKVASGGELSRISLAIQVITAQTSRVPTLVFDEVDVGIGGPTAEIVGQLLRR
LGERGQVMTVTHLPQVAAQGHQHLFVHKVRDNDATRTAVSRLSKTERIEEVARMLGGIDLTKESLAHAKKMVVTAKS

Sequences:

>Translated_557_residues
MLVHLSVHNYAIVEHLDLELDRGMSVITGETGAGKSIMLDALGLTLGDRADSGVVRPGADKADILATFDLGDIPEAQTWL
KERDLDNDGPCILRRVITAEGRSRSYINGSPCPQGDLKALGELLIDIHSQHEHQSLLKTDTHRRLLDEYAGATDLARQVH
LAAQRWRQTRQELERLSNSGDEQRARHQLLSYQLEELESLSLGENELEQLEQEHKDLTNAESLLSICRQVVEQCSESDSG
NVLNALTASLHRLGSVDHSPSALSEATGLLSSAQIQVEEAVGELNRFLDHFDADPARLQQLEERLDAIYTLARKHRIQPG
EVATLQQKLLDEIETLNANDESIERLEHEVQAFARHYQDKARELSDLRHNSATKLASAVEQEIHRLGMPGGRFQIDLKAN
ASVEPSPHGLEQVELLVSANPGQPLKALAKVASGGELSRISLAIQVITAQTSRVPTLVFDEVDVGIGGPTAEIVGQLLRR
LGERGQVMTVTHLPQVAAQGHQHLFVHKVRDNDATRTAVSRLSKTERIEEVARMLGGIDLTKESLAHAKKMVVTAKS
>Mature_557_residues
MLVHLSVHNYAIVEHLDLELDRGMSVITGETGAGKSIMLDALGLTLGDRADSGVVRPGADKADILATFDLGDIPEAQTWL
KERDLDNDGPCILRRVITAEGRSRSYINGSPCPQGDLKALGELLIDIHSQHEHQSLLKTDTHRRLLDEYAGATDLARQVH
LAAQRWRQTRQELERLSNSGDEQRARHQLLSYQLEELESLSLGENELEQLEQEHKDLTNAESLLSICRQVVEQCSESDSG
NVLNALTASLHRLGSVDHSPSALSEATGLLSSAQIQVEEAVGELNRFLDHFDADPARLQQLEERLDAIYTLARKHRIQPG
EVATLQQKLLDEIETLNANDESIERLEHEVQAFARHYQDKARELSDLRHNSATKLASAVEQEIHRLGMPGGRFQIDLKAN
ASVEPSPHGLEQVELLVSANPGQPLKALAKVASGGELSRISLAIQVITAQTSRVPTLVFDEVDVGIGGPTAEIVGQLLRR
LGERGQVMTVTHLPQVAAQGHQHLFVHKVRDNDATRTAVSRLSKTERIEEVARMLGGIDLTKESLAHAKKMVVTAKS

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=555, Percent_Identity=44.1441441441441, Blast_Score=446, Evalue=1e-126,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 61316; Mature: 61316

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: PS00422 GRANINS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVHLSVHNYAIVEHLDLELDRGMSVITGETGAGKSIMLDALGLTLGDRADSGVVRPGAD
CEEEEEECCCHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHCCHHCCCCCCCCCCCCCC
KADILATFDLGDIPEAQTWLKERDLDNDGPCILRRVITAEGRSRSYINGSPCPQGDLKAL
CCCEEEEECCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
GELLIDIHSQHEHQSLLKTDTHRRLLDEYAGATDLARQVHLAAQRWRQTRQELERLSNSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DEQRARHQLLSYQLEELESLSLGENELEQLEQEHKDLTNAESLLSICRQVVEQCSESDSG
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC
NVLNALTASLHRLGSVDHSPSALSEATGLLSSAQIQVEEAVGELNRFLDHFDADPARLQQ
CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LEERLDAIYTLARKHRIQPGEVATLQQKLLDEIETLNANDESIERLEHEVQAFARHYQDK
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
ARELSDLRHNSATKLASAVEQEIHRLGMPGGRFQIDLKANASVEPSPHGLEQVELLVSAN
HHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHEEEECC
PGQPLKALAKVASGGELSRISLAIQVITAQTSRVPTLVFDEVDVGIGGPTAEIVGQLLRR
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHH
LGERGQVMTVTHLPQVAAQGHQHLFVHKVRDNDATRTAVSRLSKTERIEEVARMLGGIDL
HCCCCCEEEEECCHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
TKESLAHAKKMVVTAKS
CHHHHHHHHHHHEEECC
>Mature Secondary Structure
MLVHLSVHNYAIVEHLDLELDRGMSVITGETGAGKSIMLDALGLTLGDRADSGVVRPGAD
CEEEEEECCCHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHCCHHCCCCCCCCCCCCCC
KADILATFDLGDIPEAQTWLKERDLDNDGPCILRRVITAEGRSRSYINGSPCPQGDLKAL
CCCEEEEECCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
GELLIDIHSQHEHQSLLKTDTHRRLLDEYAGATDLARQVHLAAQRWRQTRQELERLSNSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DEQRARHQLLSYQLEELESLSLGENELEQLEQEHKDLTNAESLLSICRQVVEQCSESDSG
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC
NVLNALTASLHRLGSVDHSPSALSEATGLLSSAQIQVEEAVGELNRFLDHFDADPARLQQ
CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LEERLDAIYTLARKHRIQPGEVATLQQKLLDEIETLNANDESIERLEHEVQAFARHYQDK
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
ARELSDLRHNSATKLASAVEQEIHRLGMPGGRFQIDLKANASVEPSPHGLEQVELLVSAN
HHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHEEEECC
PGQPLKALAKVASGGELSRISLAIQVITAQTSRVPTLVFDEVDVGIGGPTAEIVGQLLRR
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHH
LGERGQVMTVTHLPQVAAQGHQHLFVHKVRDNDATRTAVSRLSKTERIEEVARMLGGIDL
HCCCCCEEEEECCHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
TKESLAHAKKMVVTAKS
CHHHHHHHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA