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The map label for this gene is rimP

Identifier: 66047409

GI number: 66047409

Start: 4975660

End: 4976136

Strand: Reverse

Name: rimP

Synonym: Psyr_4182

Alternate gene names: 66047409

Gene position: 4976136-4975660 (Counterclockwise)

Preceding gene: 66047410

Following gene: 66047408

Centisome position: 81.66

GC content: 54.09

Gene sequence:

>477_bases
ATGCACGAGGGGGTTCAGGTGTCGAGCAAGCTAGAACAGTTGCAGGACTTGTTGGCCCCAGTGGTCGTGGCCCTTGGCTA
CCAATGCTGGGGAATCGATTTCAGTTCCCAGGGCAAGCATTCGGTGCTGCGCATTTATATCGACAAGGAAGGGGGCGTTC
TGGTCGACGACTGTGCAATCGTCAGTCGCCAGATCAGCGGTGTGTTGGACGTAGAAGATCCAATCAGCACCGAGTACACC
CTTGAAGTATCTTCTCCTGGCATGGAGCGCCCGCTGTTCACTATTGAGCAGTTTGCTTCGTACGCCGGGGAACAAGTGAA
AATAAAGCTGCGTTCACCTTTCGAAGGTCGACGCAACTTTCAAGGCCTTCTCCGCGGGGTGGAGGAGCAGGATGTCGTGG
TGCAGGTTGAAGACCATGAGTTCCTGTTGCCGATCGACATGATCGACAAGGCCAACATTATTCCCACGTTTGACTGA

Upstream 100 bases:

>100_bases
CCCCTTTTAAGGGGCTTTTTGTTAGCTGGACAGTACATGACGTCGATGTTCAGCGGCGTTTTCAGGGATGGGCTTTTGCC
CATTTTTTTATTTCTAAAGC

Downstream 100 bases:

>100_bases
GACGTGCCGGTTACTGCGGATCCCGCGGATCCAATGGCTTGCGAAAGGCGAGGCGTACGATGAGCAAAGAAGTACTGCTG
GTTGTTGAGTCGGTGTCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MHEGVQVSSKLEQLQDLLAPVVVALGYQCWGIDFSSQGKHSVLRIYIDKEGGVLVDDCAIVSRQISGVLDVEDPISTEYT
LEVSSPGMERPLFTIEQFASYAGEQVKIKLRSPFEGRRNFQGLLRGVEEQDVVVQVEDHEFLLPIDMIDKANIIPTFD

Sequences:

>Translated_158_residues
MHEGVQVSSKLEQLQDLLAPVVVALGYQCWGIDFSSQGKHSVLRIYIDKEGGVLVDDCAIVSRQISGVLDVEDPISTEYT
LEVSSPGMERPLFTIEQFASYAGEQVKIKLRSPFEGRRNFQGLLRGVEEQDVVVQVEDHEFLLPIDMIDKANIIPTFD
>Mature_158_residues
MHEGVQVSSKLEQLQDLLAPVVVALGYQCWGIDFSSQGKHSVLRIYIDKEGGVLVDDCAIVSRQISGVLDVEDPISTEYT
LEVSSPGMERPLFTIEQFASYAGEQVKIKLRSPFEGRRNFQGLLRGVEEQDVVVQVEDHEFLLPIDMIDKANIIPTFD

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

Organism=Escherichia coli, GI226510978, Length=150, Percent_Identity=48.6666666666667, Blast_Score=144, Evalue=2e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_PSE14 (Q48E75)

Other databases:

- EMBL:   CP000058
- RefSeq:   YP_276313.1
- ProteinModelPortal:   Q48E75
- SMR:   Q48E75
- STRING:   Q48E75
- GeneID:   3556223
- GenomeReviews:   CP000058_GR
- KEGG:   psp:PSPPH_4191
- eggNOG:   COG0779
- HOGENOM:   HBG668072
- OMA:   VMDVEDP
- PhylomeDB:   Q48E75
- ProtClustDB:   PRK00092
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 17667; Mature: 17667

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHEGVQVSSKLEQLQDLLAPVVVALGYQCWGIDFSSQGKHSVLRIYIDKEGGVLVDDCAI
CCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEEEEECCCCEEEHHHHH
VSRQISGVLDVEDPISTEYTLEVSSPGMERPLFTIEQFASYAGEQVKIKLRSPFEGRRNF
HHHHHCCEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCHHHH
QGLLRGVEEQDVVVQVEDHEFLLPIDMIDKANIIPTFD
HHHHCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MHEGVQVSSKLEQLQDLLAPVVVALGYQCWGIDFSSQGKHSVLRIYIDKEGGVLVDDCAI
CCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEEEEECCCCEEEHHHHH
VSRQISGVLDVEDPISTEYTLEVSSPGMERPLFTIEQFASYAGEQVKIKLRSPFEGRRNF
HHHHHCCEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCHHHH
QGLLRGVEEQDVVVQVEDHEFLLPIDMIDKANIIPTFD
HHHHCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA